Gvermi12692.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12692.t1
Unique NameGvermi12692.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length223
Homology
BLAST of Gvermi12692.t1 vs. uniprot
Match: A0A2V3J5L0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L0_9FLOR)

HSP 1 Score: 220 bits (561), Expect = 2.660e-69
Identity = 104/213 (48.83%), Postives = 149/213 (69.95%), Query Frame = 0
Query:   15 FSVAATLGE----DLCPDECKIDRSIVEAQCNHELVKGLCVIHSCSNPA---NGYTCLLPDRSFIIPNTHLFNYELVVEYSWSPHQTDLDTSTRFLNGNVGWSCTPNNVYIEFSGDDTSAGGREYTVVDVAQALADGRWHGSTAIYAYAGWHGFENQGDITMKMFMRRKSDKVNIPGASVSKTVSPGFQTNCASSIAGTIDVVRGRLHTRFTL 220
            F++AAT       D+CP+ C  +R++ + +C+  + +G+C + SCS PA    G+ C +P  SFIIPNT+L   E VVEYSWS  Q+DLDTSTRFL+ NVG+SC+P+  Y+ FSGDD S GG+E   +DV +A  + +  GST++  +AGWHG E++GD T+K+F+R+KSD   IPGA +S T++PG Q  CA++  GT+ +VR + HTRFTL
Sbjct:    9 FALAATAFAIQTVDMCPNRCNTNRAMSQRECSVAVTRGVCSVDSCSPPAYNQTGFICRMPRNSFIIPNTNLPLLEFVVEYSWSSSQSDLDTSTRFLDANVGYSCSPDKNYVAFSGDDVSYGGKESITIDVLEAFEEYQLSGSTSVATFAGWHGNEDEGDATLKVFLRKKSDLALIPGAVLSSTINPGTQYGCAATAVGTVQIVRAQHHTRFTL 221          
BLAST of Gvermi12692.t1 vs. uniprot
Match: A0A2V3IDC2_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDC2_9FLOR)

HSP 1 Score: 220 bits (560), Expect = 4.280e-69
Identity = 103/213 (48.36%), Postives = 147/213 (69.01%), Query Frame = 0
Query:   15 FSVAATLGE----DLCPDECKIDRSIVEAQCNHELVKGLCVIHSCSNPA---NGYTCLLPDRSFIIPNTHLFNYELVVEYSWSPHQTDLDTSTRFLNGNVGWSCTPNNVYIEFSGDDTSAGGREYTVVDVAQALADGRWHGSTAIYAYAGWHGFENQGDITMKMFMRRKSDKVNIPGASVSKTVSPGFQTNCASSIAGTIDVVRGRLHTRFTL 220
            F++AAT       D+CP+ C  +R + + +C+  + +G+C + SCS PA    G+ C +P  SFII NT+L   E VVEYSWS  Q+DLDTSTRFL+ NVG+ C+P+  YI FSGDD S+GG+E   +DV +A  + +  GST++ A+AGWHG EN+GD T+K+F+R+KSD+  I GA +S T+SPG Q  CA++  GT+ ++R + HTRF L
Sbjct:   13 FALAATAFAIQTVDMCPNRCNANRPMSQRECSLAVTRGVCAVESCSPPAYNRTGFICKMPQNSFIIANTNLPQLEFVVEYSWSSTQSDLDTSTRFLDANVGFRCSPDKDYIAFSGDDVSSGGKETITIDVMEAFEEYQLSGSTSVAAFAGWHGSENEGDATLKVFLRKKSDQALISGAVLSSTISPGTQNGCAATAVGTVQIIRAQHHTRFAL 225          
BLAST of Gvermi12692.t1 vs. uniprot
Match: A0A2V3J6U1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U1_9FLOR)

HSP 1 Score: 209 bits (531), Expect = 8.490e-65
Identity = 95/199 (47.74%), Postives = 131/199 (65.83%), Query Frame = 0
Query:   22 GEDLCPDECKIDRSIVEAQCNHELVKGLCVIHSCSNPANGYTCLLPDRSFIIPNTHLFNYELVVEYSWSPHQTDLDTSTRFLNGNVGWSCTPNNVYIEFSGDDTSAGGREYTVVDVAQALADGRWHGSTAIYAYAGWHGFENQGDITMKMFMRRKSDKVNIPGASVSKTVSPGFQTNCASSIAGTIDVVRGRLHTRFTL 220
              D+CP+ C  DR++ + +C+H + + LC +  C +  NGY+C +P  SF+I N  L   E V+EY+WSP Q DLDTSTRFL+GNVG+SC+  N Y++F GD+TS GG E  V+DV +A  DG+W  STAI + AGW   +NQG   MK+++RRKSD      ASVS  ++PG Q  C+     T+ ++RG LHTR TL
Sbjct:   22 SNDVCPNRCNTDRTLSDRECDHPVTRSLCAVEECED--NGYSCSMPGNSFMISNNQLSLLEFVIEYTWSPEQRDLDTSTRFLDGNVGFSCSSANDYLDFGGDNTSKGGTEVAVIDVEKARQDGKWEDSTAIISNAGWFASDNQGGAQMKVYLRRKSDGGLAEEASVSDRINPGTQRTCSPHNVATVKIIRGSLHTRVTL 218          
BLAST of Gvermi12692.t1 vs. uniprot
Match: A0A2V3ICG8_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICG8_9FLOR)

HSP 1 Score: 180 bits (456), Expect = 9.510e-53
Identity = 85/186 (45.70%), Postives = 118/186 (63.44%), Query Frame = 0
Query:   35 SIVEAQCNHELVKGLCVIHSCSNPANGYTCLLPDRSFIIPNTHLFNYELVVEYSWSPHQTDLDTSTRFLNGNVGWSCTPNNVYIEFSGDDTSAGGREYTVVDVAQALADGRWHGSTAIYAYAGWHGFENQGDITMKMFMRRKSDKVNIPGASVSKTVSPGFQTNCASSIAGTIDVVRGRLHTRFTL 220
            S  + +CNH + + +C +  C N  NGY+C +   SF+I N  L   E V+EY+WSP Q DLD STRFL+GNVG+ CT  N Y++F GD+TS G  E  V+DV +A  D +W  STAI + A W   +NQG   M++++RRKSD      ASVS  ++PG Q+NC+S     + ++RG +HTR TL
Sbjct:   90 SYPDRECNHPVTRSVCAVEECEN--NGYSCSMRGNSFMISNNQLPLLEFVIEYTWSPEQRDLDKSTRFLDGNVGFRCTGPNDYLDFGGDNTSNGETEVVVIDVEKARQDSKWEDSTAIISNARWFASDNQGGAQMRVYLRRKSDGGLAEEASVSDRINPGTQSNCSSHKVAAVKIIRGSMHTRVTL 273          
BLAST of Gvermi12692.t1 vs. uniprot
Match: A0A2V3IS11_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS11_9FLOR)

HSP 1 Score: 149 bits (377), Expect = 1.680e-41
Identity = 75/200 (37.50%), Postives = 112/200 (56.00%), Query Frame = 0
Query:   24 DLCPDECKIDRSIVEAQCNHELVKGLCVIHSCSNPA---NGYTCLLPDRSFIIPNTHLFNYELVVEYSWSPHQTDLDTSTRFLNGNVGWSCTPNNVYIEFSGDDTSAGGREYTVVDVAQALADGRWHGSTAIYAYAGWHGFENQGDITMKMFMRRKSDKVNIPGASVSKTVSPGFQTNCASSIAGTIDVVRGRLHTRFTL 220
            D+CP++C  +  +   +C    +  LC +  CS      NG++C LP+RSF++ N+ L+ +E+V+ Y W   + DLDTSTRFL  NVG+ C  N+ Y+ + GD +  GG E  VVD  +A  DG W G T+I  +AGWHG + QG   + + MRR  +     G ++   + PG Q  C+      + + RGR  TR TL
Sbjct:   25 DICPNQCYKNSRMPIRECRRSNLAHLCSVRRCSYSGQEDNGFSCSLPERSFLLKNSELWQWEMVITYWWESGKRDLDTSTRFLGANVGFKCGKNSKYLRWLGDSSKNGGDEQVVVDFDKARRDGLWTGRTSIQLHAGWHGSQQQGMAHVVVGMRRTDNHEE--GNNLYAFIYPGTQRTCSPHQVAAVKIFRGRHFTRVTL 222          
BLAST of Gvermi12692.t1 vs. uniprot
Match: A0A2V3IS72_9FLOR (VWFD domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS72_9FLOR)

HSP 1 Score: 130 bits (326), Expect = 4.890e-31
Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 0
Query:   70 SFIIPNTHLFNYELVVEYSWSPHQTDLDTSTRFLNGNVGWSCTPNNVYIEFSGDDTSAGGREYTVVDVAQALADGRWHGSTAIYAYAGWHGFENQGDITMKMFMRRKSDKVNIPGASVSKTVSPGFQTNCASSIAGTIDVVRGRLHTRFTL 220
            S  +PN     Y+LVV+Y+W   Q+DLDT TRFL+G VG+ C+P+  ++ FSGD+T  GG E  VV V  A A G W  ST + A AGW+    QG  T+++F+R       + G+ +S  VSPG Q+NCAS++ GT+++  G   T  +L
Sbjct: 1061 SVSVPNQQFEAYDLVVKYTWGSDQSDLDTGTRFLDGIVGFRCSPSGQFMTFSGDNTGTGGSETIVVRVNAARAQGLWTSSTNVTANAGWYR-RAQGPATLRVFLRENDTLSEVSGSGLSSVVSPGVQSNCASTLVGTVNIDVGVNDTTVSL 1210          
The following BLAST results are available for this feature:
BLAST of Gvermi12692.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J5L0_9FLOR2.660e-6948.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IDC2_9FLOR4.280e-6948.36Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3J6U1_9FLOR8.490e-6547.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICG8_9FLOR9.510e-5345.70Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IS11_9FLOR1.680e-4137.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS72_9FLOR4.890e-3143.05VWFD domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..222
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:967488..968156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12692.t1Gvermi12692.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 967488..968156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12692.t1 ID=Gvermi12692.t1|Name=Gvermi12692.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=223bp
MKTLFICVVGLYVSFSVAATLGEDLCPDECKIDRSIVEAQCNHELVKGLC
VIHSCSNPANGYTCLLPDRSFIIPNTHLFNYELVVEYSWSPHQTDLDTST
RFLNGNVGWSCTPNNVYIEFSGDDTSAGGREYTVVDVAQALADGRWHGST
AIYAYAGWHGFENQGDITMKMFMRRKSDKVNIPGASVSKTVSPGFQTNCA
SSIAGTIDVVRGRLHTRFTLRD*
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