Gvermi12776.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12776.t1
Unique NameGvermi12776.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length255
Homology
BLAST of Gvermi12776.t1 vs. uniprot
Match: A0A2V3IEW0_9FLOR (Putative tRNA (Cytidine(34)-2'-O)-methyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEW0_9FLOR)

HSP 1 Score: 315 bits (808), Expect = 4.830e-106
Identity = 140/195 (71.79%), Postives = 168/195 (86.15%), Query Frame = 0
Query:   40 SHKKRPISIANCQYGNPVSASQSNAATDPEDGEKLLHIVFVHPQIHWNTGNIGRTCLGLGAALHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFANGKMKDLGGTRLFFTKFGEQCATDIEWPGEGKIVMIFGSEVDGFDGIRDWLDTQGQDERRVSFPMVDDRFRSFNLSTTASMALWDAYKNVDKRG 234
            + K+R +  ++C YG   + +Q   A DP DGEK LH+VFVHPQIHWNTGNIGRTCLGLGAALHL+GP+GFSL+E+Q+RRAGLDYWQHVD+ VY+DW QFANGKMK LGGTRLFFTKFG++CA++IEW   GK V++FGSEV GFDGIRDWL ++G+ E RV+FPMVDDRFRSFNLSTTASMALWDAY++V +RG
Sbjct:   43 ARKQRRVLASSCAYG---AGAQGQVAIDPMDGEKALHVVFVHPQIHWNTGNIGRTCLGLGAALHLIGPLGFSLDEKQVRRAGLDYWQHVDVRVYEDWAQFANGKMKQLGGTRLFFTKFGDRCASEIEWNERGKTVLVFGSEVHGFDGIRDWLHSEGKHEIRVAFPMVDDRFRSFNLSTTASMALWDAYRHVARRG 234          
BLAST of Gvermi12776.t1 vs. uniprot
Match: A0A7S0ZGK6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGK6_9RHOD)

HSP 1 Score: 204 bits (519), Expect = 4.980e-62
Identity = 92/166 (55.42%), Postives = 121/166 (72.89%), Query Frame = 0
Query:   66 TDPEDGEKLLHIVFVHPQIHWNTGNIGRTCLGLGAALHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFANGKMKDLGGTRLFFTKFGEQCATDIEWPGEGKIVMIFGSEVDGFDGIRDWLDTQGQDERRVSFPM-VDDRFRSFNLSTTASMALWDAYKNV 230
            +D  DGE LLH+VFV PQIHWNTGNIGRTCLG+GA LH++GPIGFSL+++ ++RAGLDYW+ VDL VY++W QF    +      R +FTK+      D+ +   GK V+IFGSEVDG   IR+WL+     +  V++PM   D FRS+NLST+ASMALW+AYK++
Sbjct:   86 SDDTDGEPLLHVVFVSPQIHWNTGNIGRTCLGIGARLHVIGPIGFSLDDKHVKRAGLDYWKFVDLRVYENWAQFV--PVLKTFTNRFYFTKYAHVSMLDVSFTDSGKTVLIFGSEVDGLTSIREWLNENEDPQHMVAYPMNAPDVFRSYNLSTSASMALWEAYKSI 249          
BLAST of Gvermi12776.t1 vs. uniprot
Match: A0A1X6NP17_PORUM (SpoU_methylase domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NP17_PORUM)

HSP 1 Score: 173 bits (439), Expect = 3.610e-51
Identity = 86/166 (51.81%), Postives = 111/166 (66.87%), Query Frame = 0
Query:   74 LLHIVFVHPQIHWNTGNIGRTCLGLGAALHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFANGKMKDLGGTRLFFTKFGEQCATDIEWPGEGKIVMIFGSEVDGFDGIR-DWLDTQGQDERRVSFPMVD-DRFRSFNLSTTASMALWDAYKNVDKRGKKR 237
            +LH+VFV PQI WNTGNIGRTCLGLG  LHL+ PI FSL    +RRAGLDYW  VD+ +++ W  F +  +  LG    F+TK       D+E+     +V++FGSEVDGFD I  +W      D   V+FPMV+ DRFR+FNLST+ASMA+WDAY+ +  R + R
Sbjct:    1 MLHVVFVSPQIPWNTGNIGRTCLGLGVRLHLIPPISFSLSAAAVRRAGLDYWWGVDVTIHESWATFRDEVLPGLGDA-YFYTKHAPVTQVDVEYDDARGVVLLFGSEVDGFDSIAGEWEGVP--DATPVAFPMVEGDRFRAFNLSTSASMAVWDAYRQITLRRRLR 163          
BLAST of Gvermi12776.t1 vs. uniprot
Match: A0A7S0BL64_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BL64_9RHOD)

HSP 1 Score: 174 bits (440), Expect = 1.060e-50
Identity = 90/178 (50.56%), Postives = 121/178 (67.98%), Query Frame = 0
Query:   54 GNPVSASQSNAATDPEDGEKLLHIVFVHPQIHWNTGNIGRTCLGLGAA-LHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFA-NGKMKDLGGTRL---FFTKFGEQCATDIEWPGEGK--IVMIFGSEVDGFDGIRDWLDTQGQDERRVSFPMVD-DRFRSFNLSTTASMAL 223
            G  +S+    A    ED E LLH+VF  PQIHWNTGNIGRTC+G+G A LHLVGPI FSL+E+Q+RRAGLDYWQ VDLH+++ W  F   G  ++  G++    FFTK+G +   D+ +P +GK  IV++FG+E DG   I D L+ +     +V+ PM + D  RS+NLST+AS+AL
Sbjct:   40 GPKLSSQNDGAIVSSEDLEPLLHVVFYRPQIHWNTGNIGRTCIGIGGAQLHLVGPIAFSLDEKQVRRAGLDYWQSVDLHLWESWADFEMKGPYRE--GSKAESYFFTKYGAESLLDVRFPTDGKTKIVLVFGNETDGLTEIEDQLENRN----KVALPMHNQDLMRSYNLSTSASIAL 211          
BLAST of Gvermi12776.t1 vs. uniprot
Match: A0A7W1I0N5_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1I0N5_9BACT)

HSP 1 Score: 149 bits (377), Expect = 5.710e-42
Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 0
Query:   74 LLHIVFVHPQIHWNTGNIGRTCLGLGAALHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFANGKMKDLGGTRLFFTKFGEQCATDIEWPGEGKIVMIFGSEVDGFDGIRDWLDTQGQ-DERRVSFPMVDDRFRSFNLSTTASMALWDAYK 228
            ++H+V VHP+IHWNTGN GRTCL  GA LHL+ P+GFSL+ERQ+RRAGLDYW+HVDL V+ DW  F   ++  LG T  FF+    +   D      G IV+IFG E  G  G     D   +  +R V  PM+  R RS NLSTT  +A+++  +
Sbjct:    1 MIHVVLVHPEIHWNTGNAGRTCLAAGATLHLIEPLGFSLDERQVRRAGLDYWEHVDLRVWKDWDTFER-ELSTLG-TPYFFSTKATRPLWDAPLGSPGDIVLIFGRETGGLPG-----DVHERYHDRFVGMPMLSPRVRSLNLSTTVGIAVYEVLR 149          
BLAST of Gvermi12776.t1 vs. uniprot
Match: A0A7W0QP26_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W0QP26_9BACT)

HSP 1 Score: 145 bits (366), Expect = 3.000e-40
Identity = 70/154 (45.45%), Postives = 97/154 (62.99%), Query Frame = 0
Query:   75 LHIVFVHPQIHWNTGNIGRTCLGLGAALHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFANGKMKDLGGTRLFFTKFGEQCATDIEWPGEGKIVMIFGSEVDGFDGIRDWLDTQGQDERRVSFPMVDDRFRSFNLSTTASMALWDAYK 228
            +H+V VHP+IHWNTGN GRTCL  GA LHL+ P+GFSL+ERQ++RAGLDYW+HVD+ V+ DW  F N ++  LG    F TK   Q   D    G   +V++FG E  G          +   ER V+ P++  R RS NLST+ ++A+++  +
Sbjct:    3 IHVVLVHPEIHWNTGNAGRTCLAAGAVLHLIEPLGFSLDERQVKRAGLDYWEHVDVRVWADWRAFEN-ELPTLGDPYFFSTK-ATQSFWDAPLGGPENVVLVFGRETGGLPADL----HERYRERFVTMPILSPRVRSLNLSTSVAIAVYETLR 150          
BLAST of Gvermi12776.t1 vs. uniprot
Match: A0A1E3Y7K4_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Acidobacteria bacterium SCN 69-37 TaxID=1660160 RepID=A0A1E3Y7K4_9BACT)

HSP 1 Score: 141 bits (356), Expect = 1.210e-38
Identity = 70/163 (42.94%), Postives = 97/163 (59.51%), Query Frame = 0
Query:   66 TDPEDGEKLLHIVFVHPQIHWNTGNIGRTCLGLGAALHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFANGKMKDLGGTRLFFTKFGEQCATDIEWPGEGKIVMIFGSEVDGFDGIRDWLDTQGQDERRVSFPMVDDRFRSFNLSTTASMALWDAYK 228
            T   D    +H+V VHP+IHWNTGN GRTCL +GAALHL+ P+GFSL+ERQ+RRAGLDYW HVDL V+ DW  F +  + + G    F TK   +   +  +    ++V++FG E  G     D  D      R V  P++    RS NLST+ ++A ++  +
Sbjct:    2 TTARDATPAIHVVLVHPEIHWNTGNAGRTCLAVGAALHLIEPLGFSLDERQVRRAGLDYWAHVDLRVWPDWAAFES-HLPEFGEPFFFSTK-APRSFWEAPFGAPDRVVLVFGRETAGLPA--DLHDRYSH--RFVRMPILSTHVRSLNLSTSVALAAYEVLR 158          
BLAST of Gvermi12776.t1 vs. uniprot
Match: A0A6M4IQY4_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Gemmatimonas groenlandica TaxID=2732249 RepID=A0A6M4IQY4_9BACT)

HSP 1 Score: 139 bits (349), Expect = 8.950e-38
Identity = 71/159 (44.65%), Postives = 98/159 (61.64%), Query Frame = 0
Query:   75 LHIVFVHPQIHWNTGNIGRTCLGLGAALHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFANGKMKDLGGTRLFFTKFGEQCATDIEW-----PGEGKIVMIFGSEVDGFDGIRDWLDTQGQDERRVSFPMVDDRFRSFNLSTTASMALWDAYK 228
            +H+V VHP+IHWNTGN GRTCL  GA LHL+ P+GFSL+E Q++RAGLDYW+HVD+ V+  W  F   ++  LG    F TK     AT + W     P EG  V++FG E  G          +   +R VS P++ +R RS NLSTT ++A+++  +
Sbjct:    3 IHVVLVHPEIHWNTGNAGRTCLATGATLHLIEPLGFSLDEAQVKRAGLDYWEHVDVRVWPSWEAFE-AELPRLGQPYFFSTK-----ATQLFWDAPLAPVEGT-VLVFGRETGGLPAEL----HERYADRFVSLPILSERVRSLNLSTTVAIAVYEVLR 150          
BLAST of Gvermi12776.t1 vs. uniprot
Match: A0A521TEG9_9BACT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A521TEG9_9BACT)

HSP 1 Score: 137 bits (346), Expect = 2.520e-37
Identity = 72/159 (45.28%), Postives = 100/159 (62.89%), Query Frame = 0
Query:   75 LHIVFVHPQIHWNTGNIGRTCLGLGAALHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFANGKMKDLGGTRLFFTKFGEQCATDIEWP---GEGK-IVMIFGSEVDGFDG-IRDWLDTQGQDERRVSFPMVDDRFRSFNLSTTASMALWDAYK 228
            +H+V VHP+IHWNTGN GRTCL +GA LHLV P+GFSL++RQ++RAGLDYW+HVDL V+ DW  F    +  LG    F TK     AT   W    GE +  V+IFG E  G    +R     +  ++R V  P++ +  RS NLST+ ++A+++  +
Sbjct:    1 MHVVLVHPEIHWNTGNAGRTCLAVGATLHLVEPLGFSLDDRQVKRAGLDYWEHVDLRVWPDWGAFERA-LPALGEPWFFSTK-----ATRELWDAPLGESEDAVLIFGRETGGLPSEVR-----EKYNDRLVKIPILSEHVRSLNLSTSVALAVYEVMR 148          
BLAST of Gvermi12776.t1 vs. uniprot
Match: A0A7J7IL86_9RHOD (SpoU_methylase domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IL86_9RHOD)

HSP 1 Score: 140 bits (352), Expect = 8.500e-37
Identity = 84/210 (40.00%), Postives = 111/210 (52.86%), Query Frame = 0
Query:   39 FSHKKRPISI-ANC---QYGNPVSASQSNAATDPEDGEKLLHIVFVHPQIHWNTGNIGRTCLGLGAALHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFANGKMKDLGGTRLFFTKFGEQCATDIEWPGEG--------KIVMIFGSEVDGFDGIRDWLDTQGQD---ERRVSFPMV---DDRFRSFNLSTTASMALWDAYKNV 230
            FS    P  I   C    YG  V+      A+    GE LL+IV   P IHWNTGN  RT +G  A LHL+ P+GFSL +R ++RAGLDYW HVDL V+  W  F    +  LG    FFTKF  +   +++             KI +IFG+E+ GF+ I        +D   ER V+ PMV   +   RS+NLST+  + LW+AY+ V
Sbjct:   22 FSRTSTPARINGRCLVATYGPGVTCGPLRHAST---GEPLLNIVLYAPSIHWNTGNAARTAVGFQARLHLIEPLGFSLSDRHLKRAGLDYWPHVDLRVWPSWSVFWEKGIPTLGHV-FFFTKFAARSLVNVDLVDSSANADLLNTKITLIFGNEIHGFENI------PPEDIPLERTVAIPMVCPSESGIRSYNLSTSVGIVLWEAYRQV 221          
The following BLAST results are available for this feature:
BLAST of Gvermi12776.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IEW0_9FLOR4.830e-10671.79Putative tRNA (Cytidine(34)-2'-O)-methyltransferas... [more]
A0A7S0ZGK6_9RHOD4.980e-6255.42Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NP17_PORUM3.610e-5151.81SpoU_methylase domain-containing protein n=1 Tax=P... [more]
A0A7S0BL64_9RHOD1.060e-5050.56Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7W1I0N5_9BACT5.710e-4248.08Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A7W0QP26_9BACT3.000e-4045.45Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A1E3Y7K4_9BACT1.210e-3842.94Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A6M4IQY4_9BACT8.950e-3844.65Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A521TEG9_9BACT2.520e-3745.28Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A7J7IL86_9RHOD8.500e-3740.00SpoU_methylase domain-containing protein n=1 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001537tRNA/rRNA methyltransferase, SpoU typePFAMPF00588SpoU_methylasecoord: 75..223
e-value: 3.3E-20
score: 72.7
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 64..242
e-value: 2.3E-29
score: 104.0
NoneNo IPR availablePIRSRPIRSR029256-1PIRSR029256-1coord: 75..229
e-value: 2.1E-33
score: 112.8
IPR016914tRNA (cytidine/uridine-2'-O-)-methyltransferasePANTHERPTHR42971TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASEcoord: 54..234
IPR016914tRNA (cytidine/uridine-2'-O-)-methyltransferaseHAMAPMF_01885tRNA_methyltr_TrmLcoord: 75..233
score: 26.393486
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 75..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1486794..1487658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12776.t1Gvermi12776.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1486794..1487658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12776.t1 ID=Gvermi12776.t1|Name=Gvermi12776.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=255bp
MAGKMTSFILPGNCALRSRRGKNKQCNYQPGTGGSLSCFSHKKRPISIAN
CQYGNPVSASQSNAATDPEDGEKLLHIVFVHPQIHWNTGNIGRTCLGLGA
ALHLVGPIGFSLEERQIRRAGLDYWQHVDLHVYDDWLQFANGKMKDLGGT
RLFFTKFGEQCATDIEWPGEGKIVMIFGSEVDGFDGIRDWLDTQGQDERR
VSFPMVDDRFRSFNLSTTASMALWDAYKNVDKRGKKRTMLNTLQTDNSSV
VNHF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001537SpoU_MeTrfase
IPR029026tRNA_m1G_MTases_N
IPR016914tRNA_cyt/urid_MeTfrase
IPR029028Alpha/beta_knot_MTases