Gvermi12675.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12675.t1
Unique NameGvermi12675.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length406
Homology
BLAST of Gvermi12675.t1 vs. uniprot
Match: A0A2V3J1Q5_9FLOR (Protein MON2-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Q5_9FLOR)

HSP 1 Score: 407 bits (1045), Expect = 9.560e-126
Identity = 225/385 (58.44%), Postives = 274/385 (71.17%), Query Frame = 0
Query:    1 LCSPCFDDDITLKLLQTLLSLLTVRPYVCALSDPNLSRAFSMLFHLRSVRSTSASNPAXXXXXXXXHFSTHAQAPTPSTPNPTPPADRGVIEHTAHAAFRQVASDLFAAAAEAAVRTAVERHAASGQFIPLAAFPSEATAAFNLFLDLCHAIAAEPCHWLSSLTPDPAHPLHLTLAIEVIDDSLASNIALFAAQPVFSELLLARLCPALHKLLSTTSHKPTLKSLLSLVVTLVRNYWRNLRPDTETFCHMLANLARVPRPNANAATRAMESWRPIYAMEALRCIFSATASDSSPLVDFVCAYDLADGSAAKCVAGVLDTVAHDISLVQDCQISLLPPAPITAAMKPFAKLIANQLEFVVAIAIGLHVQIVNAAADAVRNNLISVA 385
            L S C DD+ITLK+LQTLLSLLTVR Y  +LS+ +LSRAFS+LFHL+S R+    NPA        +FST A A            DRG+IE TA AAFRQV+SDLFAAAA+A VRTAVER A +G+FIPLA FPSEA+AAF+LFLDLCHA++ E   WLS+   D +HP   TLA+EVIDDSLA+NI+LFA QPVFSELLLARLCP++HKLL TT  K  LKSL SL+VTLVRNYWRNL PD ETFC  L  +A +   N         SW  IYAMEALRCIF +  ++ SPL+DF  ++DL D +  KCV+GV+ T + +I+  +   + LLP  PIT  MKPFAKLI N  +F+ AIA+GLH+ IV AA +AV+ NL +VA
Sbjct:  107 LTSTCCDDNITLKVLQTLLSLLTVRSYTRSLSEHHLSRAFSLLFHLKSARNHHKGNPATNALSAISNFSTPAAA------------DRGIIEQTAKAAFRQVSSDLFAAAADATVRTAVERQAPAGEFIPLAVFPSEASAAFSLFLDLCHAVSGESFTWLSTTPSDRSHPFEATLALEVIDDSLATNISLFAGQPVFSELLLARLCPSIHKLLHTTRDKAVLKSLFSLIVTLVRNYWRNLTPDAETFCSALTTMAALADENERKTRH--HSWAAIYAMEALRCIFRSVPNEPSPLLDFARSFDLGD-AGGKCVSGVIATASDEITFSESLMLGLLPAPPITGTMKPFAKLITNTPDFMAAIAVGLHIDIVRAADEAVQKNLHNVA 476          
BLAST of Gvermi12675.t1 vs. uniprot
Match: R7QQH4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQH4_CHOCR)

HSP 1 Score: 286 bits (733), Expect = 8.480e-83
Identity = 174/387 (44.96%), Postives = 236/387 (60.98%), Query Frame = 0
Query:    1 LCSPCFDDDITLKLLQTLLSLLTVRPYVCALSDPNLSRAFSMLFHLRSVRSTSASNPAXXXXXXXXHFSTHAQAPTPSTPNPTPPADRGVIEHTAHAAFRQVASDLFAAAAEAAVRTAVERHAASGQFIPLAAFPSEATAAFNLFLDLCHAIAAEPCHWLS--SLTPDPAHPLHLTLAIEVIDDSLASNIALFAAQPVFSELLLARLCPALHKLLSTTSHKPTLKSLLSLVVTLVRNYWRNLRPDTETFCHMLANLARVPRPNANAATRAMESWRPIYAMEALRCIFSATASDSSPLVDFVCAYDLADGSAAKCVAGVLDTVAHDISLVQDCQISLLPPAPITAAMKPFAKLIANQLEFVVAIAIGLHVQIVNAAADAVRNNLISVA 385
            L SP  DD++TLK+LQ LLSLLTVR Y  AL + +LSRAFS+LF LR+ RS +    A          S  +              D GVIE T+ AAFRQV+SDLFA+A+++A+RTAVE+ + SG FIPL+ FP EA AA NLFLDLC+A + E   WL+           L L LA+EVIDD L++NI+LFA Q VFS++L +RLCP LHKL+ T   K T+KSLL LVVT+ RNYWR LRPD E     L  ++   + ++         W  +YAME+LRCI      + + LVDF  A+DL +G+     A ++ T    + LV    I+ LP +P+ + MKPFA  + N  + +++IA GL+++I+N A +A +  L  VA
Sbjct:  169 LSSPPQDDNLTLKVLQGLLSLLTVRSYAKALCEEDLSRAFSLLFTLRTSRSNTGGTAASNALSAISQLSNGS--------------DAGVIEQTSKAAFRQVSSDLFASASDSALRTAVEKQSPSGAFIPLSEFPCEARAAHNLFLDLCYAASNEELSWLAYEKSANSSFRALDLALALEVIDDGLSNNISLFAGQQVFSDVLSSRLCPVLHKLIRTIKDKSTMKSLLGLVVTITRNYWRILRPDCEALLFTLTKMSSTSKISSGDEI----PWDCMYAMESLRCIVKVVPGEPTTLVDFTQAFDLQEGTG-DLAASIVATSCDAMELVNRGDITPLPSSPLNSTMKPFANTMTNSYDHLISIATGLYLEIINGAKEAAKKGLDVVA 536          
BLAST of Gvermi12675.t1 vs. uniprot
Match: A0A7S2ZIG8_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZIG8_9RHOD)

HSP 1 Score: 100 bits (248), Expect = 6.550e-19
Identity = 90/292 (30.82%), Postives = 132/292 (45.21%), Query Frame = 0
Query:    1 LCSPCFDDDITLKLLQTLLSLLTVRPYVCALSDPNLSRAFSMLFHLRSVRSTSASNPAXXXXXXXXHFSTHAQAPTPSTPNPTPPADRGVIEHTAHAAFRQVASDLFAAAAEAAVRTAVERHAASGQFIPLAA------FPSEATAAFNLFLDLCHAIAAEPCHWLSSLTPDPAHPLHLTLAIEVIDDSLASNIALFAAQPVFSELLLARLCPALHKLLSTTSHKPTLKSLLSLVVTLVRNYWRNLRPDTETFCHMLANLARVPRPNANAATRAMESWRPIYAMEALRCIFS 286
            L  P  D  + LK+L+ LLSLLT R +   LS+       SML  L ++    +++PA          +T A                 V + T+  AFRQV S++F  A+EAA   + E  A  GQ     A       P+    A+ LF DLC  +  + C WL          + L L +EV+++ L  +  LF +      LL +RLCPALH+ L++T+   T   LL +V  LV N+  +L+PD E    +L      P      ++        + A+EALRC FS
Sbjct:  135 LVEPTTDQSVLLKVLEALLSLLTSRYFQPHLSESMQRMGLSMLLDLSNIGEDPSASPAQT-------IATIAI----------------VRKQTSEVAFRQVCSEIFFHASEAAEANS-ENDAVDGQSPAKLASSSVGDLPAAIACAYLLFRDLCAVVHGDDCTWLG------VESIRLGLVLEVVEEVLRGD--LFQSSKRLKALLTSRLCPALHERLNSTASTATYALLLRIVFLLVVNFLDDLQPDIEVMLFLLVKTVEDPGSMGECSSPLHR----VLALEALRCTFS 390          
The following BLAST results are available for this feature:
BLAST of Gvermi12675.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J1Q5_9FLOR9.560e-12658.44Protein MON2-like n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QQH4_CHOCR8.480e-8344.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZIG8_9RHOD6.550e-1930.82Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032691Guanine nucleotide exchange factor, N-terminalPFAMPF12783Sec7_Ncoord: 139..304
e-value: 3.2E-15
score: 56.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:329818..331035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12675.t1Gvermi12675.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 329818..331035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12675.t1 ID=Gvermi12675.t1|Name=Gvermi12675.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=406bp
LCSPCFDDDITLKLLQTLLSLLTVRPYVCALSDPNLSRAFSMLFHLRSVR
STSASNPASSALSAISHFSTHAQAPTPSTPNPTPPADRGVIEHTAHAAFR
QVASDLFAAAAEAAVRTAVERHAASGQFIPLAAFPSEATAAFNLFLDLCH
AIAAEPCHWLSSLTPDPAHPLHLTLAIEVIDDSLASNIALFAAQPVFSEL
LLARLCPALHKLLSTTSHKPTLKSLLSLVVTLVRNYWRNLRPDTETFCHM
LANLARVPRPNANAATRAMESWRPIYAMEALRCIFSATASDSSPLVDFVC
AYDLADGSAAKCVAGVLDTVAHDISLVQDCQISLLPPAPITAAMKPFAKL
IANQLEFVVAIAIGLHVQIVNAAADAVRNNLISVAVQKRSISRFIMIENS
ELARD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032691Sec7_N