Gvermi3541.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
|
Overview
Homology
BLAST of Gvermi3541.t1 vs. uniprot
Match: A0A345U8Z1_9FLOR (30S ribosomal protein S2, chloroplastic n=1 Tax=Agarophyton vermiculophyllum TaxID=2608709 RepID=A0A345U8Z1_9FLOR) HSP 1 Score: 456 bits (1172), Expect = 3.140e-158 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
Query: 229 MSIVSLSELLEAGAHFGHQARRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGTSYTSHK 459
MSIVSLSELLEAGAHFGHQARRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGTSYTSHK
Sbjct: 1 MSIVSLSELLEAGAHFGHQARRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGTSYTSHK 231
BLAST of Gvermi3541.t1 vs. uniprot
Match: A0A5N6NLV6_9ASTR (DNA-directed RNA polymerase n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NLV6_9ASTR) HSP 1 Score: 470 bits (1210), Expect = 5.400e-153 Identity = 239/462 (51.73%), Postives = 325/462 (70.35%), Query Frame = 0
Query: 2 MAFSGARANISQVRQLVGMRGLMADPQGQIIDLPISSNFREGLTVTDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIIRETNCNTAKGIILEAMIDNRKTLISLNQALIGRVLAEDLVDEVNCKLIATANTEISPELAEKIVTSGISSVLVRSPITCESVKSVCQSCYGWNLAHGRIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELAQTIIIMSI--VSLSELL--EAGAHFGHQA------RRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGT 453
M+FSGAR N SQV QLVGMRGLM+DPQGQ+IDLPI SN REGL++T+Y IS YGARKG+VDTA+RT+D+GYLTRRLV+V Q +++R T+C T +GI + I + Q LIGRVLA+D+ + + IAT N +I L + +T + +R+P TC S +CQ CYG + AH +V+LGEAVGIIA QSIGEPGTQLT+RTFHTGGVFTG A+ + S + +E L GH A +WNPKM PYI +R G+HI +L +TA+ L+EAC + +AA GK+FL +GTK + A +A AIR+ +Y+N++WLGGMLTNW T ++R+ + + L TE+ +G ++ LPK++AA+ +R+L L+ L GIK M+ LPD +++VDQ E TA+QEC+ LGIP IC++DTNC+P++ DI IPANDDAI SI+LI++K+ +I T
Sbjct: 214 MSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAIRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPRNGMMADRIFI-QTLIGRVLADDIY--IGSRCIATRNQDIGVGLVNRFITFRAQPISIRTPFTCRSTSWICQLCYGRSPAHDDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSRDLKWNPKMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKEADSVAWAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGGIKYMTGLPDIVIIVDQHEEYTALQECITLGIPTICLIDTNCDPDLADISIPANDDAISSIRLILNKLVFAICSAT 672
BLAST of Gvermi3541.t1 vs. uniprot
Match: RR2_GRATL (30S ribosomal protein S2, chloroplastic n=2 Tax=Agarophyton TaxID=2510776 RepID=RR2_GRATL) HSP 1 Score: 423 bits (1088), Expect = 1.800e-145 Identity = 207/231 (89.61%), Postives = 227/231 (98.27%), Query Frame = 0
Query: 229 MSIVSLSELLEAGAHFGHQARRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGTSYTSHK 459
MSIVSLSELLEAGAHFGHQARRWNP+MFPYIYTERNG+HIIDLVQTAQLLTEACQFIR+A+QEGKKFLFLGTKRQAAGVIAEQAIRS+SYY+NQRWLGGMLTNWMTIKSRVERL++LE +E +G+ID+LPKKEAAI+RREL+KLRKNLNGIKNMS+LPDFIVVVDQKRETTAIQEC+KLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIIS+IADSIIEG++Y +K
Sbjct: 1 MSIVSLSELLEAGAHFGHQARRWNPRMFPYIYTERNGIHIIDLVQTAQLLTEACQFIRDASQEGKKFLFLGTKRQAAGVIAEQAIRSNSYYVNQRWLGGMLTNWMTIKSRVERLQRLEMDEQAGLIDMLPKKEAAINRRELDKLRKNLNGIKNMSRLPDFIVVVDQKRETTAIQECIKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISRIADSIIEGSTYALNK 231
BLAST of Gvermi3541.t1 vs. uniprot
Match: A0A345U8D5_9FLOR (30S ribosomal protein S2, chloroplastic n=2 Tax=Gracilariaceae TaxID=31469 RepID=A0A345U8D5_9FLOR) HSP 1 Score: 415 bits (1067), Expect = 2.580e-142 Identity = 201/229 (87.77%), Postives = 223/229 (97.38%), Query Frame = 0
Query: 229 MSIVSLSELLEAGAHFGHQARRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGTSYTS 457
MSIVSLSELL+AG HFGHQARRWNPKMFPYIYTERNG+HIIDLVQTAQLLT+ACQFI+ A+Q+GK+FLFLGTKRQAAGVIAEQAIRS+SYYINQRWLGGMLTNWMTIKSRV+RLKKLE EE SG++DILPKKEA+++R+ELEKLRKNLNGIK+M+KLPDF+V+VDQKRETTAIQECVKLGIP ICILDTNCNPEIIDIPIPANDDAIRSIKLI+SKIADSIIEG +Y+S
Sbjct: 1 MSIVSLSELLKAGTHFGHQARRWNPKMFPYIYTERNGIHIIDLVQTAQLLTDACQFIKEASQQGKRFLFLGTKRQAAGVIAEQAIRSNSYYINQRWLGGMLTNWMTIKSRVDRLKKLEIEEKSGLLDILPKKEASVNRKELEKLRKNLNGIKDMNKLPDFVVIVDQKRETTAIQECVKLGIPTICILDTNCNPEIIDIPIPANDDAIRSIKLIMSKIADSIIEGANYSS 229
BLAST of Gvermi3541.t1 vs. uniprot
Match: A0A345U7T2_GRAGA (30S ribosomal protein S2, chloroplastic n=23 Tax=Gracilariaceae TaxID=31469 RepID=A0A345U7T2_GRAGA) HSP 1 Score: 415 bits (1067), Expect = 3.200e-142 Identity = 202/226 (89.38%), Postives = 221/226 (97.79%), Query Frame = 0
Query: 229 MSIVSLSELLEAGAHFGHQARRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGTS 454
MSI+SLSELLEAGAHFGHQ+RRWNPKMFPYIYTERNG+HIIDLVQTAQLLTEAC+FIR+A+++GKKFLFLGTKRQAAGVIAEQAIRS+SYYINQRWLGG+LTNWMTIKSRV+RL+KLETEE SGIIDILPKKEA+I R+ELEKLRKNLNGIKNM+KLPDF++VVDQKRETTAIQEC+KLGIP ICILDTNCNPEI+DIPIPANDDAIRSIKLII KIADSIIEG S
Sbjct: 1 MSIISLSELLEAGAHFGHQSRRWNPKMFPYIYTERNGIHIIDLVQTAQLLTEACRFIRDASRDGKKFLFLGTKRQAAGVIAEQAIRSNSYYINQRWLGGILTNWMTIKSRVDRLQKLETEEDSGIIDILPKKEASIHRKELEKLRKNLNGIKNMTKLPDFVIVVDQKRETTAIQECIKLGIPTICILDTNCNPEIVDIPIPANDDAIRSIKLIIGKIADSIIEGAS 226
BLAST of Gvermi3541.t1 vs. uniprot
Match: A0A345U8Z2_9FLOR (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Agarophyton vermiculophyllum TaxID=2608709 RepID=A0A345U8Z2_9FLOR) HSP 1 Score: 439 bits (1130), Expect = 1.670e-139 Identity = 228/230 (99.13%), Postives = 228/230 (99.13%), Query Frame = 0
Query: 1 MMAFSGARANISQVRQLVGMRGLMADPQGQIIDLPISSNFREGLTVTDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIIRETNCNTAKGIILEAMIDNRKTLISLNQALIGRVLAEDLVDEVNCKLIATANTEISPELAEKIVTSGISSVLVRSPITCESVKSVCQSCYGWNLAHGRIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELAQTIIIMS 230
MMAFSGARANISQVRQLVGMRGLMADPQGQIIDLPISSNFREGLTVTDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIIRETNCNTAKGIILEAMIDNRKTLISLNQALIGRVLAEDLVDEVNCKLIATANTEISPELAEKIVTSGISSVLVRSPITCESVKSVCQSCYGWNLAHGRIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELAQTII S
Sbjct: 132 MMAFSGARANISQVRQLVGMRGLMADPQGQIIDLPISSNFREGLTVTDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIIRETNCNTAKGIILEAMIDNRKTLISLNQALIGRVLAEDLVDEVNCKLIATANTEISPELAEKIVTSGISSVLVRSPITCESVKSVCQSCYGWNLAHGRIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELAQTIISSS 361
BLAST of Gvermi3541.t1 vs. uniprot
Match: UPI001D128D1E (ribosomal protein S2 n=1 Tax=Hydropuntia urvillei TaxID=2873519 RepID=UPI001D128D1E) HSP 1 Score: 407 bits (1047), Expect = 2.790e-139 Identity = 200/227 (88.11%), Postives = 217/227 (95.59%), Query Frame = 0
Query: 229 MSIVSLSELLEAGAHFGHQARRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGTSY 455
MSIVSLSELL+AG HFGHQARRWNPKMFPYIYTERNG+HIIDLVQTAQLLTEACQ IR A+Q+GKKFLFLGTKRQAAGVIAEQAIRS+SYY+NQRWLGGMLTNWMTIKSRV RL+KLE EE SG+ID LPKKEA+ +RRELEKLRKNL+GIKNM+KLPDF+VVVDQKRE TAIQEC+KLGIPIICILD+NCNPEIID+PIPANDDAIRSIKLIISKIADSIIEG +Y
Sbjct: 1 MSIVSLSELLKAGVHFGHQARRWNPKMFPYIYTERNGIHIIDLVQTAQLLTEACQIIRRASQQGKKFLFLGTKRQAAGVIAEQAIRSNSYYVNQRWLGGMLTNWMTIKSRVNRLQKLEIEEESGLIDKLPKKEASRNRRELEKLRKNLSGIKNMNKLPDFVVVVDQKREITAIQECIKLGIPIICILDSNCNPEIIDVPIPANDDAIRSIKLIISKIADSIIEGANY 227
BLAST of Gvermi3541.t1 vs. uniprot
Match: A0A345U778_9FLOR (30S ribosomal protein S2, chloroplastic n=2 Tax=Gracilaria TaxID=2774 RepID=A0A345U778_9FLOR) HSP 1 Score: 407 bits (1046), Expect = 4.260e-139 Identity = 200/229 (87.34%), Postives = 220/229 (96.07%), Query Frame = 0
Query: 229 MSIVSLSELLEAGAHFGHQARRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGTSYTS 457
MSI+SLSELLEAGAHFGHQARRW+PKMFPYIYTERNG+HIIDLVQT+QLLTEAC+FIR+A+ +GKKFLFLGTKRQAAGVIAEQAIRS+SYYINQRWLGGMLTNWMTIKSRVERL+KLE EE +GI+DILPKKEA+I RRELEKLRKNLNGIK+M KLPDF+++VDQKRETTAIQEC+KLGIP I ILDTNCNPEIIDIPIPANDDAIRSIKLIISK+ADSIIEG + TS
Sbjct: 1 MSIISLSELLEAGAHFGHQARRWDPKMFPYIYTERNGIHIIDLVQTSQLLTEACRFIRDASSKGKKFLFLGTKRQAAGVIAEQAIRSNSYYINQRWLGGMLTNWMTIKSRVERLQKLEIEEEAGIMDILPKKEASIYRRELEKLRKNLNGIKDMKKLPDFVIIVDQKRETTAIQECIKLGIPTISILDTNCNPEIIDIPIPANDDAIRSIKLIISKMADSIIEGANSTS 229
BLAST of Gvermi3541.t1 vs. uniprot
Match: A0A0C5DZK2_GRALE (30S ribosomal protein S2, chloroplastic n=6 Tax=Gracilariopsis TaxID=2781 RepID=A0A0C5DZK2_GRALE) HSP 1 Score: 404 bits (1037), Expect = 1.060e-137 Identity = 196/231 (84.85%), Postives = 219/231 (94.81%), Query Frame = 0
Query: 229 MSIVSLSELLEAGAHFGHQARRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGTSYTSHK 459
MSI+SL+ELLEAGAHFGHQARRWNPKMFPYIYTE NG+HIIDLVQTA LLTEACQFIRNAA+EGKKFLFLGTKRQAAGVIAEQAIRS+SYY+NQRWLGGMLTNW+TIKSRVERL++LE E SG+I+ +PKKEA+++RRELEKLRK+L GI+NM LPDF+++VDQKRETTAIQECVKLGIP ICILDTNCNPEIIDIPIPANDDAIRSIKLI+SKIADSIIEGT+Y S +
Sbjct: 1 MSIISLNELLEAGAHFGHQARRWNPKMFPYIYTESNGIHIIDLVQTAHLLTEACQFIRNAAKEGKKFLFLGTKRQAAGVIAEQAIRSNSYYVNQRWLGGMLTNWVTIKSRVERLQELEMAEESGVINSMPKKEASMTRRELEKLRKHLKGIQNMYNLPDFVIIVDQKRETTAIQECVKLGIPTICILDTNCNPEIIDIPIPANDDAIRSIKLIMSKIADSIIEGTNYKSEQ 231
BLAST of Gvermi3541.t1 vs. uniprot
Match: A0A1C9CD55_CERJP (Ribosomal protein S2 n=2 Tax=Ceramium TaxID=31380 RepID=A0A1C9CD55_CERJP) HSP 1 Score: 390 bits (1003), Expect = 1.320e-132 Identity = 188/226 (83.19%), Postives = 211/226 (93.36%), Query Frame = 0
Query: 229 MSIVSLSELLEAGAHFGHQARRWNPKMFPYIYTERNGVHIIDLVQTAQLLTEACQFIRNAAQEGKKFLFLGTKRQAAGVIAEQAIRSDSYYINQRWLGGMLTNWMTIKSRVERLKKLETEESSGIIDILPKKEAAISRRELEKLRKNLNGIKNMSKLPDFIVVVDQKRETTAIQECVKLGIPIICILDTNCNPEIIDIPIPANDDAIRSIKLIISKIADSIIEGTS 454
MSIVSL ELLEAG HFGHQ+RRWNPKMFPYIYTERNG+HIIDLVQTAQLL EAC FI+NAA EGK FLFLGTKRQAA +IA +AIRS+SYYINQRWLGGMLTNW+TIKSRVERLK LE +E+SG IDILPKKEA++ RRELEKL+K+LNGIK+M KLPD +V+VDQKRETTAIQEC+KLGIP ICILDTNCNPEIID+PIPANDDAIRSIKL+ISK+AD+I+EGT+
Sbjct: 1 MSIVSLEELLEAGVHFGHQSRRWNPKMFPYIYTERNGIHIIDLVQTAQLLNEACAFIKNAASEGKTFLFLGTKRQAASIIAREAIRSNSYYINQRWLGGMLTNWITIKSRVERLKYLENQENSGSIDILPKKEASMLRRELEKLKKHLNGIKSMKKLPDLVVIVDQKRETTAIQECIKLGIPTICILDTNCNPEIIDVPIPANDDAIRSIKLVISKLADAILEGTN 226 The following BLAST results are available for this feature:
BLAST of Gvermi3541.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi3541.t1 ID=Gvermi3541.t1|Name=Gvermi3541.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=460bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|