Gvermi9075.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi9075.t1
Unique NameGvermi9075.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length225
Homology
BLAST of Gvermi9075.t1 vs. uniprot
Match: A0A2V3J5N2_9FLOR (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N2_9FLOR)

HSP 1 Score: 400 bits (1029), Expect = 8.220e-140
Identity = 213/226 (94.25%), Postives = 218/226 (96.46%), Query Frame = 0
Query:    1 MVPEPSPQPP--ADPXXXXXXXXVAPPVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAKEYGIIDEVIKTKVDVPVLKRPTFV 224
            MVPEPSPQPP  ADPXXXXXX  V PPVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDP+KDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYM+DFTGQP++KIE DTDRDFFMTA+DA EYGIIDEVIKTKVDVPVLKRPT V
Sbjct:   41 MVPEPSPQPPQPADPXXXXXXSTVPPPVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPEKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMSDFTGQPLDKIETDTDRDFFMTAIDAMEYGIIDEVIKTKVDVPVLKRPTLV 266          
BLAST of Gvermi9075.t1 vs. uniprot
Match: R7QUP2_CHOCR (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUP2_CHOCR)

HSP 1 Score: 359 bits (922), Expect = 1.420e-124
Identity = 179/197 (90.86%), Postives = 189/197 (95.94%), Query Frame = 0
Query:   28 MVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAKEYGIIDEVIKTKVDVPVLKRPTFV 224
            MVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQ+LFLASEDPDKDIT+YINSPGG VSAG+AIYDTMQFIPCDVQTICFGTAASMGAFLL AGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQA+EILFVK LLNGYMADFTGQ ++KI+ DTDRDFFMTA DA+EYG+IDEVIKTK+DVPVL RPT V
Sbjct:    1 MVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQLLFLASEDPDKDITMYINSPGGGVSAGMAIYDTMQFIPCDVQTICFGTAASMGAFLLSAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAREILFVKDLLNGYMADFTGQSLQKIQNDTDRDFFMTAADAQEYGLIDEVIKTKIDVPVLARPTLV 197          
BLAST of Gvermi9075.t1 vs. uniprot
Match: UPI001E1D26D8 (ATP-dependent Clp protease proteolytic subunit 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D26D8)

HSP 1 Score: 342 bits (878), Expect = 6.950e-118
Identity = 173/196 (88.27%), Postives = 184/196 (93.88%), Query Frame = 0
Query:   28 MVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAKEYGIIDEVIKTKVDVPVLKRPTF 223
            MVA+GD SQMDIYSRLAKDRILLLGR VDDEVANSLVAQML+L SEDPDK ITIYINSPGGSV+AG+AIYDTMQF+ CD+QTICFGTAASMGAFLL AGTKG RKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMA+FTGQP+EKIE DTDRDFFMTA +AKEYG+IDEVIKT V+VPVL RP F
Sbjct:    1 MVAMGD-SQMDIYSRLAKDRILLLGRQVDDEVANSLVAQMLYLNSEDPDKPITIYINSPGGSVAAGMAIYDTMQFLSCDIQTICFGTAASMGAFLLAAGTKGMRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMAEFTGQPLEKIENDTDRDFFMTAAEAKEYGLIDEVIKTSVEVPVLSRPEF 195          
BLAST of Gvermi9075.t1 vs. uniprot
Match: M2VV76_GALSU (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VV76_GALSU)

HSP 1 Score: 329 bits (844), Expect = 3.010e-111
Identity = 168/218 (77.06%), Postives = 189/218 (86.70%), Query Frame = 0
Query:    4 EPSPQPPADPXXXXXXXXVAPPVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAKEYGIIDEVIKTKVDVPVLKRP 221
            +P P+PP+ P           P+P V +GD  QMDIYSRLAKDRILLLGRAVDDEVAN+LVAQMLFLA+EDP KDIT+YINSPGGSVSAGLA+YDTMQFIPCDV T+CFGTAASM AFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQA+EILF+K+LLN YMAD+TG+P+EKIE+DTDRDFFMT  +A EYG+IDEVI+TK    VL +P
Sbjct:   74 QPEPEPPSRPDRTEPSRKPPAPIPTVYMGDT-QMDIYSRLAKDRILLLGRAVDDEVANALVAQMLFLANEDPSKDITLYINSPGGSVSAGLAVYDTMQFIPCDVSTVCFGTAASMAAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAREILFIKSLLNTYMADYTGKPLEKIEQDTDRDFFMTPEEALEYGMIDEVIQTK---KVLAKP 287          
BLAST of Gvermi9075.t1 vs. uniprot
Match: A0A1X6P0G7_PORUM (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0G7_PORUM)

HSP 1 Score: 322 bits (826), Expect = 7.000e-109
Identity = 161/193 (83.42%), Postives = 178/193 (92.23%), Query Frame = 0
Query:   24 PPVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAKEYGIIDEVIKTKVDVP 216
            PP+PMVAVGD  QMDIYSRLAKDRIL+LG AVDD VAN LVAQMLFLASEDPDKDIT++INSPGGS+SAGLAI+DTMQF+PCD+QTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQA EILF++ LLN YMA +TG  +EKIE+DTDRD+FMT  DA EYG+ID+VIKTKV +P
Sbjct:   69 PPMPMVAVGDG-QMDIYSRLAKDRILVLGAAVDDTVANQLVAQMLFLASEDPDKDITLWINSPGGSISAGLAIFDTMQFVPCDIQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAGEILFMRGLLNSYMAGYTGVAVEKIEKDTDRDYFMTPEDAVEYGLIDDVIKTKVMLP 260          
BLAST of Gvermi9075.t1 vs. uniprot
Match: R7QLF4_CHOCR (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF4_CHOCR)

HSP 1 Score: 318 bits (816), Expect = 2.400e-107
Identity = 161/197 (81.73%), Postives = 178/197 (90.36%), Query Frame = 0
Query:   25 PVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAKEYGIIDEVIKTKVDVPVLKRP 221
            PVPMV  GDN QMD+YSRLAKDRILLLGR VDDEVAN+LVAQMLFL+++DP KDIT+YINSPGGSVSAGLAI+DTMQ+IPCDV TICFGTAASMGAFLLG+GTKGKRKSLPN+RIMIHQPLGGAQGQAADIEIQAKEILF+++LLNGYMA  TGQ + KIE DTDRDFFMT  +A EYGIIDEVI+TK  +P   RP
Sbjct:   71 PVPMVTFGDN-QMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVSAGLAIFDTMQYIPCDVATICFGTAASMGAFLLGSGTKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYMAYATGQDLNKIEVDTDRDFFMTPEEALEYGIIDEVIQTKRSLPKPARP 266          
BLAST of Gvermi9075.t1 vs. uniprot
Match: A0A5J4YL26_PORPP (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL26_PORPP)

HSP 1 Score: 317 bits (812), Expect = 9.420e-107
Identity = 157/197 (79.70%), Postives = 181/197 (91.88%), Query Frame = 0
Query:   25 PVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAKEYGIIDEVIKTKVDVPVLKRP 221
            P+PMVA+G+  QMD++SRLAKDRILLLGR VDDEVAN+LVAQML+LA++DP KDIT+YINSPGGSVSAGLAIYDTMQ+IPCDVQTICFGTAASMGAFLLGAG KGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEIL++K +LN YM+++TG+ +++IE+DTDRDFFMT  +AKEYGIIDEVI+TKV    L  P
Sbjct:   68 PMPMVAMGEG-QMDVFSRLAKDRILLLGRQVDDEVANALVAQMLYLAADDPSKDITLYINSPGGSVSAGLAIYDTMQYIPCDVQTICFGTAASMGAFLLGAGAKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILWIKEVLNMYMSEYTGKELQQIEKDTDRDFFMTPAEAKEYGIIDEVIETKVSGKFLMPP 263          
BLAST of Gvermi9075.t1 vs. uniprot
Match: A0A7S0DXN8_9CRYP (ATP-dependent Clp protease proteolytic subunit n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0DXN8_9CRYP)

HSP 1 Score: 315 bits (808), Expect = 5.020e-106
Identity = 168/223 (75.34%), Postives = 185/223 (82.96%), Query Frame = 0
Query:    3 PEPSPQPPADPXXXXXXXXVAPPVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAKEYGIIDEVIKTKV-DVPVLKRPTFV 224
            P P   PPA P           P+PMV+VG+  QMDIYSRLAKDRILLLG  V+DEVAN+LVAQMLFLA+EDP KDITIYINSPGGSVSAG+AIYDTMQ+IPCD  T+CFGTAASMGAFLL +G  GKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVK+LLN YMAD TGQP++KIE DTDRDFFMT  +AKEYGIIDEVI+TK  ++P   RP  V
Sbjct:   64 PRPGEAPPAKPSI---------PMPMVSVGEG-QMDIYSRLAKDRILLLGTDVNDEVANNLVAQMLFLANEDPGKDITIYINSPGGSVSAGMAIYDTMQYIPCDASTVCFGTAASMGAFLLCSGAPGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKSLLNSYMADATGQPLDKIEEDTDRDFFMTPEEAKEYGIIDEVIQTKKSNLPKPSRPILV 276          
BLAST of Gvermi9075.t1 vs. uniprot
Match: A0A2V3IUR2_9FLOR (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR2_9FLOR)

HSP 1 Score: 309 bits (791), Expect = 2.150e-104
Identity = 155/197 (78.68%), Postives = 174/197 (88.32%), Query Frame = 0
Query:   25 PVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAKEYGIIDEVIKTKVDVPVLKRP 221
            PVPMV  G+N QMD+YSRLAKDRILLLGR VDDEVAN+LVAQMLFL+++DP KDIT+YINSPGGSVSAGLAI+DTMQ+IPCDV TICFGTAASMGAFLL AG KGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILF+++LLNGY++  TGQ +  IERDTDRDFFM   +A +YGIIDEVI TK  +P   +P
Sbjct:   15 PVPMVTFGEN-QMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPSKDITLYINSPGGSVSAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLATIERDTDRDFFMAPEEALDYGIIDEVIPTKRTLPKPPKP 210          
BLAST of Gvermi9075.t1 vs. uniprot
Match: A0A7S0BSP9_9RHOD (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BSP9_9RHOD)

HSP 1 Score: 306 bits (784), Expect = 1.440e-103
Identity = 151/193 (78.24%), Postives = 176/193 (91.19%), Query Frame = 0
Query:   28 MVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAKEYGIIDEVIKTKVDVPVLKR 220
            MVAVGD  QMDIYSRLAKDRIL+LGR+VDDEVANSLVAQML+L+SE  ++DIT+YINSPGGSVSAG+AI+D MQFIPCD+QTIC+G AASMGAFLLGAGTKGKRK+LPNARIMIHQP+GGAQGQAADI IQA+EILFVK +LN YMA +TGQ ++KI RDTDRD+F+T V+AK YGIIDEVI+T+V VP + +
Sbjct:    1 MVAVGDG-QMDIYSRLAKDRILVLGRSVDDEVANSLVAQMLYLSSEHAERDITLYINSPGGSVSAGMAIFDAMQFIPCDIQTICYGVAASMGAFLLGAGTKGKRKALPNARIMIHQPMGGAQGQAADIAIQAREILFVKNMLNSYMASYTGQSIDKIVRDTDRDYFLTPVEAKAYGIIDEVIQTRVKVPRISK 192          
The following BLAST results are available for this feature:
BLAST of Gvermi9075.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5N2_9FLOR8.220e-14094.25ATP-dependent Clp protease proteolytic subunit n=1... [more]
R7QUP2_CHOCR1.420e-12490.86ATP-dependent Clp protease proteolytic subunit n=1... [more]
UPI001E1D26D86.950e-11888.27ATP-dependent Clp protease proteolytic subunit 2-l... [more]
M2VV76_GALSU3.010e-11177.06ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A1X6P0G7_PORUM7.000e-10983.42ATP-dependent Clp protease proteolytic subunit n=1... [more]
R7QLF4_CHOCR2.400e-10781.73ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A5J4YL26_PORPP9.420e-10779.70ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S0DXN8_9CRYP5.020e-10675.34ATP-dependent Clp protease proteolytic subunit n=3... [more]
A0A2V3IUR2_9FLOR2.150e-10478.68ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S0BSP9_9RHOD1.440e-10378.24ATP-dependent Clp protease proteolytic subunit n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 130..149
score: 63.5
coord: 38..53
score: 50.78
coord: 109..126
score: 66.39
coord: 78..98
score: 66.55
coord: 187..206
score: 57.38
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 18..212
score: 41.317795
IPR001907ATP-dependent Clp protease proteolytic subunitCDDcd07017S14_ClpP_2coord: 38..208
e-value: 1.70344E-109
score: 309.757
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 34..211
e-value: 1.0E-80
score: 270.0
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 33..216
NoneNo IPR availableGENE3D3.90.226.10coord: 21..214
e-value: 3.5E-78
score: 263.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR10381:SF24ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 4, CHLOROPLASTICcoord: 33..216
IPR018215ClpP, Ser active sitePROSITEPS00381CLP_PROTEASE_SERcoord: 109..120
IPR033135ClpP, histidine active sitePROSITEPS00382CLP_PROTEASE_HIScoord: 131..144
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 36..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:1697498..1698172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi9075.t1Gvermi9075.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 1697498..1698172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi9075.t1 ID=Gvermi9075.t1|Name=Gvermi9075.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=225bp
MVPEPSPQPPADPPKPDAPPSVAPPVPMVAVGDNSQMDIYSRLAKDRILL
LGRAVDDEVANSLVAQMLFLASEDPDKDITIYINSPGGSVSAGLAIYDTM
QFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQG
QAADIEIQAKEILFVKALLNGYMADFTGQPMEKIERDTDRDFFMTAVDAK
EYGIIDEVIKTKVDVPVLKRPTFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR018215ClpP_Ser_AS
IPR033135ClpP_His_AS
IPR029045ClpP/crotonase-like_dom_sf