Gvermi8860.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8860.t1
Unique NameGvermi8860.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length70
Homology
BLAST of Gvermi8860.t1 vs. uniprot
Match: A0A7S0BPP6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BPP6_9RHOD)

HSP 1 Score: 82.0 bits (201), Expect = 8.530e-19
Identity = 35/64 (54.69%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    1 MSLLPFIPNWLVLGAWFYGAYRFYRGFHRTSYQSSFRLPLALAWPLLFAVNPSYRSNFTKSLRA 64
            MSL+PF+PN++++G + Y AYRF RGF  T+YQ  +R+PLAL WP LFAVN S+R NF  ++++
Sbjct:   37 MSLVPFVPNFVLIGGYGYMAYRFARGFRSTTYQQDYRIPLALLWPFLFAVNGSFRKNFLTAIKS 100          
BLAST of Gvermi8860.t1 vs. uniprot
Match: M1V6G8_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V6G8_CYAM1)

HSP 1 Score: 64.7 bits (156), Expect = 1.700e-11
Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    2 SLLPFIPNWLVLGAWFYGAYRFYRGFHRTSYQSSFRLPLALAWPLLFAVNPSYRSNFTKSLR 63
             L+P +PNWLV   + Y AYRFYRGF RT++ SS +L L L WPLL  +  S R N  ++LR
Sbjct:   86 GLIPLVPNWLVAVLYLYFAYRFYRGFERTTFDSSSKLILTLIWPLLL-ITGSGRRNLQRALR 146          
BLAST of Gvermi8860.t1 vs. uniprot
Match: A0A6B3N8G3_9CYAN (Uncharacterized protein n=2 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6B3N8G3_9CYAN)

HSP 1 Score: 58.9 bits (141), Expect = 4.200e-10
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:   10 WLVLGAWFYGAYRFYRGFHRTSYQSSF--RLPLALAWPLLFAVNPSYRSNFTKSLR 63
            WL+LGA+ YG +RF++GF RT++      R+ L+  WP+L   N SYR NFTK+L+
Sbjct:    7 WLLLGAYGYGVWRFWKGFGRTNFSRKLPIRIYLSALWPVLIITNKSYRQNFTKALK 62          
BLAST of Gvermi8860.t1 vs. uniprot
Match: K9T4T0_9CYAN (Uncharacterized protein n=2 Tax=Pleurocapsales TaxID=52604 RepID=K9T4T0_9CYAN)

HSP 1 Score: 57.0 bits (136), Expect = 2.360e-9
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   15 AWFYGAYRFYRGFHRTSYQSSF--RLPLALAWPLLFAVNPSYRSNFTKSLR 63
            A+ +GA++F++GF RT++  S   R+ LAL WP+L  +NPSYR NF K+LR
Sbjct:   11 AYIWGAWKFWKGFDRTNFNRSLPNRMRLALLWPVLLVMNPSYRKNFQKALR 61          
BLAST of Gvermi8860.t1 vs. uniprot
Match: A0A3M1T5Q2_9CYAN (Uncharacterized protein n=1 Tax=Cyanobacteria bacterium J055 TaxID=2420338 RepID=A0A3M1T5Q2_9CYAN)

HSP 1 Score: 56.6 bits (135), Expect = 3.600e-9
Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   19 GAYRFYRGFHRTSYQSSF--RLPLALAWPLLFAVNPSYRSNFTKSLR 63
            G ++F+RGFHRTS++ SF  +  L+L WP+L   N SYR NFTK+L+
Sbjct:   16 GVWKFWRGFHRTSFEKSFGNQFTLSLLWPVLLIANKSYRRNFTKALK 62          
BLAST of Gvermi8860.t1 vs. uniprot
Match: UPI0009327472 (hypothetical protein n=1 Tax=Spirulina major TaxID=270636 RepID=UPI0009327472)

HSP 1 Score: 56.2 bits (134), Expect = 4.990e-9
Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    5 PFIPNWLVLGAWFYGAYRFYRGFHRTSYQSSF--RLPLALAWPLLFAVNPSYRSNFTKSLR 63
            P +  +L+L A+ +G ++F++G+ RT++Q+S   ++ LAL WP L  VN SYR NF K+LR
Sbjct:    3 PVVITFLLLVAYGWGIWKFWKGYDRTNFQASLVSKVTLALFWPALLIVNKSYRKNFQKALR 63          
BLAST of Gvermi8860.t1 vs. uniprot
Match: UPI0002ABA94E (hypothetical protein n=1 Tax=Leptolyngbya sp. PCC 6406 TaxID=1173264 RepID=UPI0002ABA94E)

HSP 1 Score: 53.9 bits (128), Expect = 3.720e-8
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:   19 GAYRFYRGFHRTSYQSSFRLPLALAWPLLFAVNPSYRSNFTKSLR 63
            GA+RF++GFHRT++    RL +   WP+L  VN SYR NF K+L+
Sbjct:   16 GAWRFWKGFHRTNFSGG-RLTMTALWPILLVVNKSYRQNFNKALK 59          
BLAST of Gvermi8860.t1 vs. uniprot
Match: K9XGT6_9CHRO (Uncharacterized protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=K9XGT6_9CHRO)

HSP 1 Score: 52.8 bits (125), Expect = 1.110e-7
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   19 GAYRFYRGFHRTSYQSSF--RLPLALAWPLLFAVNPSYRSNFTKSLR 63
            G ++F++GFHRT++  SF  RL L+L WP L   N SYR NF K+L+
Sbjct:   15 GTWKFWKGFHRTTFSRSFSNRLSLSLLWPALLISNKSYRQNFRKALK 61          
BLAST of Gvermi8860.t1 vs. uniprot
Match: A0A2P8WI72_9CYAN (Uncharacterized protein n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8WI72_9CYAN)

HSP 1 Score: 51.6 bits (122), Expect = 3.040e-7
Identity = 23/45 (51.11%), Postives = 33/45 (73.33%), Query Frame = 0
Query:   19 GAYRFYRGFHRTSYQSSFRLPLALAWPLLFAVNPSYRSNFTKSLR 63
            GA++F+ GF+RT++    +L L L WPLL AVN SYR NF ++L+
Sbjct:   16 GAWKFWSGFNRTNFDQG-KLQLTLLWPLLLAVNKSYRQNFNRALK 59          
BLAST of Gvermi8860.t1 vs. uniprot
Match: UPI0016894EF5 (hypothetical protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI0016894EF5)

HSP 1 Score: 51.6 bits (122), Expect = 3.040e-7
Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 0
Query:   19 GAYRFYRGFHRTSYQSSFRLPLALAWPLLFAVNPSYRSNFTKSLR 63
            GA++F++GFHRT++    +L L L WPL   VN SYR NF ++L+
Sbjct:   16 GAWKFWKGFHRTNFSQG-KLQLTLLWPLFLMVNRSYRQNFNRALK 59          
The following BLAST results are available for this feature:
BLAST of Gvermi8860.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A7S0BPP6_9RHOD8.530e-1954.69Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M1V6G8_CYAM11.700e-1151.61Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A6B3N8G3_9CYAN4.200e-1048.21Uncharacterized protein n=2 Tax=unclassified Sympl... [more]
K9T4T0_9CYAN2.360e-950.98Uncharacterized protein n=2 Tax=Pleurocapsales Tax... [more]
A0A3M1T5Q2_9CYAN3.600e-953.19Uncharacterized protein n=1 Tax=Cyanobacteria bact... [more]
UPI00093274724.990e-944.26hypothetical protein n=1 Tax=Spirulina major TaxID... [more]
UPI0002ABA94E3.720e-851.11hypothetical protein n=1 Tax=Leptolyngbya sp. PCC ... [more]
K9XGT6_9CHRO1.110e-751.06Uncharacterized protein n=2 Tax=Cyanobacteria TaxI... [more]
A0A2P8WI72_9CYAN3.040e-751.11Uncharacterized protein n=1 Tax=filamentous cyanob... [more]
UPI0016894EF53.040e-748.89hypothetical protein n=1 Tax=Pseudanabaena sp. FAC... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..35
NoneNo IPR availableTMHMMTMhelixcoord: 4..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:287388..287597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8860.t1Gvermi8860.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 287388..287597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8860.t1 ID=Gvermi8860.t1|Name=Gvermi8860.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=70bp
MSLLPFIPNWLVLGAWFYGAYRFYRGFHRTSYQSSFRLPLALAWPLLFAV
NPSYRSNFTKSLRASPDDL*
back to top