Gvermi8852.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8852.t1
Unique NameGvermi8852.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length260
Homology
BLAST of Gvermi8852.t1 vs. uniprot
Match: A0A2V3IDP0_9FLOR (DNA N6-methyl adenine demethylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDP0_9FLOR)

HSP 1 Score: 418 bits (1074), Expect = 3.260e-146
Identity = 198/255 (77.65%), Postives = 225/255 (88.24%), Query Frame = 0
Query:    1 MAADRFCLPSLFPSAKSRPSSVPGFILREDAFTSEEEAALIHAVDTSSAQWTRRRTRITKNYGPYYFYQERDTAEGRFRYTDGKIMHTPLPDFLHTLVMPIITREVPEISAFQPNQLHVALYKKEEQSKIHMHNDNKMGELGPYIVGMCLLSDCYMTFVRPKDGKKRVLHLPRRCVYVMTGESHHEWRHGILKGQTSGDRVSFTLREVRKLAVEDGARVKKSSHMPSAKSIRDQAMRDERAHRREMDRPNINLAD 255
            M  +RFCLP+ F S KSR +SVPGFIL E+AFT EEEAAL+HAVD+S A+WTRRRTRITKNYGPYY YQER+T +GRFRYTDG I+HTPLPDFL +LVMPI+ R VP++  F+PNQLHVALYKKEE SKIHMHNDNKMGELGP+IVGMCLLSDCYMTFVRPKDG++RVLHLPRRCVYVM+GESHHEWRHGILKGQT+ DRVSFTLR+VRKLAVE+GA+V KSSHMPS K+IRDQ  +D R  R E ++ NI LAD
Sbjct:    1 MGGERFCLPTFFSSPKSRFNSVPGFILCENAFTEEEEAALLHAVDSSPAKWTRRRTRITKNYGPYYLYQERNTPQGRFRYTDGNIIHTPLPDFLESLVMPIVKRGVPQLEEFKPNQLHVALYKKEEDSKIHMHNDNKMGELGPFIVGMCLLSDCYMTFVRPKDGRRRVLHLPRRCVYVMSGESHHEWRHGILKGQTASDRVSFTLRDVRKLAVEEGAKVTKSSHMPSKKNIRDQRAKDARVQRGEREQLNITLAD 255          
BLAST of Gvermi8852.t1 vs. uniprot
Match: W6KEV5_9TRYP (2OG-FeII_Oxy_2 domain-containing protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KEV5_9TRYP)

HSP 1 Score: 66.6 bits (161), Expect = 3.420e-9
Identity = 54/193 (27.98%), Postives = 91/193 (47.15%), Query Frame = 0
Query:   21 SVPGFILREDAFTSEEEAALIHAVDTSSAQ--WTRRRT-RITKNYGPYYFYQERDTAEGRFRYTDGKIMHTPLPDFLHTLVMPIITR--EVPEISAFQPNQLHVALYKKEEQSKIHMHNDNKMGELGPYIVGMCLLSDCYMTFVRPKDGKKRVLHLPRRCVYVMTGESHHEWRHGILKGQTSGDRVSFTLREV 208
            S+ G  +  D  + +EE  L+  +D  S    W   ++ R  + YGP     +++  + + + T+   +  P  + L      ++ R  E P I A    ++ V  Y +   S    H D+     G  I G+ LL DC++TFV   +G    + LPR+C ++M+GES + W H I        R+SFT+RE+
Sbjct:   94 SILGLHVVRDFLSDDEETYLVKFLDDPSPYPPWKESQSGRRVQEYGP-----KKNFKKKKIKTTEFVSIPLPFENILDK-ARGLVERLTEKPYIIA----EVSVLEYLRRRLSNFDPHIDDTW-LWGDRIAGINLLEDCFITFVN-SEGVCLEVFLPRKCFFLMSGESRYSWMHAIRPENVGNRRISFTIREL 274          
BLAST of Gvermi8852.t1 vs. uniprot
Match: A0A654HSM6_9CEST (Uncharacterized protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654HSM6_9CEST)

HSP 1 Score: 57.4 bits (137), Expect = 6.550e-6
Identity = 60/220 (27.27%), Postives = 87/220 (39.55%), Query Frame = 0
Query:   24 GFILREDAFTSEEEAALIHAVDTSSAQWTRRRT-RITKNYGPYYFYQERDTAEGRFRYTDGKIMHTPLPDFLHTLVMPIITR---EVPEISAFQPNQLHVALYKKEEQSKIHMHNDNKMGELGPYIVGMCLLSDCYMTFVRP--------------KDGKKR-----------------VLHLPRRCVYVMTGESHHEWRHGILKGQTSGDRVSFTLREV 208
            G  L  +  +  EE ALIH +D S   W   ++ R  ++YG    ++++  A G F         T LP +   LV  +  R     P  S F P +L    Y  +  + I  H D+     G  IV + L S+  M F  P              +D  K                   +HLPRRC+ +M+G   H W H I +      R+S TLRE+
Sbjct:   97 GVTLLLEFISEAEEEALIHEIDMSP--WVPSQSGRYKQDYGAKVNFKKKRVALGAF---------TGLPSYSRKLVKRLHQRMRETDPSFSEFYPVELCNLEYLPQRGAAIVPHLDDSW-LWGERIVLLNLASETNMLFTLPMKTSSLSDSPAADERDRYKEFSNKFLPDEVARLPPRVTVHLPRRCLLIMSGPPRHLWLHEINRRDIKARRISLTLREL 304          
BLAST of Gvermi8852.t1 vs. uniprot
Match: A0A3P7ETK4_SCHSO (Uncharacterized protein n=4 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A3P7ETK4_SCHSO)

HSP 1 Score: 57.0 bits (136), Expect = 8.670e-6
Identity = 58/221 (26.24%), Postives = 89/221 (40.27%), Query Frame = 0
Query:   23 PGFILREDAFTSEEEAALIHAVDTSSAQWTRRRT-RITKNYGPYYFYQERDTAEGRFRYTDGKIMHTPLPDFLHTLVMPIITR---EVPEISAFQPNQLHVALYKKEEQSKIHMHNDNKMGELGPYIVGMCLLSDCYMTFVRP-KDG------------------------------KKRVLHLPRRCVYVMTGESHHEWRHGILKGQTSGDRVSFTLREV 208
            PG  +  +  +  EE ALIH +D+S   W   ++ R  ++YG    ++++      F         T LP++   LV  +  R     P  + F P +L    Y  +  + I  H D+     G  IV + L S+  M F  P K G                               +  +HLPRRC++VM+G   H W H I +      R+S TLRE+
Sbjct:   91 PGVTVLLEFISEAEEEALIHEIDSSP--WVPSQSGRYKQDYGVKVNFKKKRVVLSAF---------TGLPNYSRKLVRRLHQRMRETDPSFTEFYPVELCNLEYLPQRGAAIVPHVDDSW-LWGERIVLLNLASETNMLFTLPMKSGLPADSLAADEWNRYKAFSNEFLSEEVAQLLPRVTVHLPRRCLFVMSGPPRHVWLHEINRKDIKARRISLTLREL 299          
The following BLAST results are available for this feature:
BLAST of Gvermi8852.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IDP0_9FLOR3.260e-14677.65DNA N6-methyl adenine demethylase n=1 Tax=Gracilar... [more]
W6KEV5_9TRYP3.420e-927.982OG-FeII_Oxy_2 domain-containing protein n=1 Tax=P... [more]
A0A654HSM6_9CEST6.550e-627.27Uncharacterized protein n=1 Tax=Sparganum prolifer... [more]
A0A3P7ETK4_SCHSO8.670e-626.24Uncharacterized protein n=4 Tax=Schistocephalus so... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037151Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyGENE3D2.60.120.590coord: 15..215
e-value: 9.4E-31
score: 108.8
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likePFAMPF135322OG-FeII_Oxy_2coord: 26..206
e-value: 7.1E-16
score: 58.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..259
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 19..209
IPR032857Alpha-ketoglutarate-dependent dioxygenase alkB homologue 4PANTHERPTHR12463OXYGENASE-RELATEDcoord: 17..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:272057..272836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8852.t1Gvermi8852.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 272057..272836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8852.t1 ID=Gvermi8852.t1|Name=Gvermi8852.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=260bp
MAADRFCLPSLFPSAKSRPSSVPGFILREDAFTSEEEAALIHAVDTSSAQ
WTRRRTRITKNYGPYYFYQERDTAEGRFRYTDGKIMHTPLPDFLHTLVMP
IITREVPEISAFQPNQLHVALYKKEEQSKIHMHNDNKMGELGPYIVGMCL
LSDCYMTFVRPKDGKKRVLHLPRRCVYVMTGESHHEWRHGILKGQTSGDR
VSFTLREVRKLAVEDGARVKKSSHMPSAKSIRDQAMRDERAHRREMDRPN
INLADSLGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037151AlkB-like_sf
IPR027450AlkB-like
IPR032857ALKBH4