Gvermi8840.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8840.t1
Unique NameGvermi8840.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length478
Homology
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BLAST of Gvermi8840.t1 vs. uniprot
Match: A0A2V3ITN6_9FLOR (CENP-B-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITN6_9FLOR)

HSP 1 Score: 247 bits (631), Expect = 1.740e-70
Identity = 134/228 (58.77%), Postives = 163/228 (71.49%), Query Frame = 0 
Query:    1 MECGITSLLKLAFKRQQLFSVLDGVDQGLKNAFNVNPVVAMRWLSHEWITLPPNLIQRCWQQSLGNIDPDDHQVLVESRREEAYEINELLNDVGRVCSGVSIRSLLCSLDDSDCIETVNLDTLGDSVVDRLLTEKMDSSPATTPLKIPVLPPVEEQLKAFAIVRQILDQRGMTDKKLRAVVRDVQREIRIELTAQTGRNTLFSLERSNQLPQSIQARQVEKTQHAQHI 228
            MECGI S +KL FKRQQLFSVLD VD+   + F+VNP VAMRWLSHEW  + PN+IQ CWQQSLGNIDPD HQ LVE+ REEAYEINEL N+V RVC   +IRSLL S ++SDCIE V L+TL D+VV+RLL  K+ +    TP  +P LPPV+EQLKA AIVR ILD+R MT  +LR V+RDVQR+IR E  A           + N+ PQ+  A + ++ Q AQ +
Sbjct:  319 MECGIISTMKLRFKRQQLFSVLDRVDESAADVFHVNPHVAMRWLSHEWKVMSPNVIQSCWQQSLGNIDPDRHQFLVETTREEAYEINELFNEVARVCGLSNIRSLLYSPNESDCIERVTLETLRDTVVERLLASKVGNQNVITP-HVPHLPPVKEQLKALAIVRLILDERAMTASQLRKVIRDVQRDIRTEHAA-----------KQNRTPQTGTAIRCKEEQQAQQV 534
The following BLAST results are available for this feature:
BLAST of Gvermi8840.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ITN6_9FLOR1.740e-7058.77CENP-B-like n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 434..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:241919..243352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8840.t1Gvermi8840.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 241919..243352 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8840.t1 ID=Gvermi8840.t1|Name=Gvermi8840.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=478bp
MECGITSLLKLAFKRQQLFSVLDGVDQGLKNAFNVNPVVAMRWLSHEWIT
LPPNLIQRCWQQSLGNIDPDDHQVLVESRREEAYEINELLNDVGRVCSGV
SIRSLLCSLDDSDCIETVNLDTLGDSVVDRLLTEKMDSSPATTPLKIPVL
PPVEEQLKAFAIVRQILDQRGMTDKKLRAVVRDVQREIRIELTAQTGRNT
LFSLERSNQLPQSIQARQVEKTQHAQHIQQSPKRKAPPSSQLNLQPNQFQ
RLRPSPQHQQSPKSSQSHQSQSSEHSENSQPSEQTKHVQRSHCLEKNYRT
SSPVQVQGSAAASLLSCSARTRSDVKSSEVPSFDHNKISTGMESRVLVST
GLPKDSVMQVDSPQLQGEHANVGPTSNVPIAPSDDERQVRDEENLISTEL
AKDSEMKSDALSLEGEHANIGPNSDIPITLSDNEPQIRDEESTARTKATV
PHKDIQSSEEDMQRKTGRESERVSEIS*
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