Gvermi8808.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8808.t1
Unique NameGvermi8808.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length498
Homology
BLAST of Gvermi8808.t1 vs. uniprot
Match: A0A2V3IM88_9FLOR (H/ACA ribonucleoprotein complex subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM88_9FLOR)

HSP 1 Score: 748 bits (1930), Expect = 1.630e-268
Identity = 375/445 (84.27%), Postives = 406/445 (91.24%), Query Frame = 0
Query:   15 FVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLPQTEQPPNQNVS--VALPENGEAKA---GINGAAKKETAVDEAPSMEVEDAITPENK 454
            +V+KP +SKPELDTS WPLLLK+YD LNVRSSHFTPIPVGHSPL RPILEY+RYGVINLDKPSNPSSHEVVAWIK+ILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+GVLKLHG+LGENPVSK+RRAVEMLTGALFQRPPLISAVKRQLRIRT+YEAKLLEYDE KRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWV+DNQRDESYLRSVIQPLEALLVN+KRIVVKDTAVNAICYGAVLMIPGVLRF+DDI+V QE+ LITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRV+MERDTYPRAWGLGP AGKKKGLIREGKLDK+G  NE TPADW+  YK L +P   QP ++  S  VA P NG   A    ++ + +   + +E PSMEVEDA+TP+++
Sbjct:   16 YVVKPESSKPELDTSKWPLLLKNYDTLNVRSSHFTPIPVGHSPLSRPILEYLRYGVINLDKPSNPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVGVLKLHGELGENPVSKVRRAVEMLTGALFQRPPLISAVKRQLRIRTVYEAKLLEYDEAKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVYDNQRDESYLRSVIQPLEALLVNFKRIVVKDTAVNAICYGAVLMIPGVLRFEDDIDVGQEVALITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVVMERDTYPRAWGLGPTAGKKKGLIREGKLDKYGNHNEKTPADWKNSYKSLNVPPPAQPSSEERSADVAAPANGSTPALPPKVHKSEESPFSAEEVPSMEVEDAVTPDDR 460          
BLAST of Gvermi8808.t1 vs. uniprot
Match: R7Q3X0_CHOCR (Box H/ACA snoRNP rRNA pseudouridine syntase component dyskerin n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3X0_CHOCR)

HSP 1 Score: 638 bits (1646), Expect = 1.350e-225
Identity = 306/445 (68.76%), Postives = 373/445 (83.82%), Query Frame = 0
Query:   13 DQFVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLPQTEQPPNQNVSVALPENGEAKAGINGAAKKETAVDEAPSMEVEDAITPENKSDK 457
            +++++KP +  P LDTS WPLLLK+YD LNVR++HFTPIPVG SP KRP+ +Y+RYGVINLDKP+NPSSHEVVAWIK+IL+VDKTGHSGTLDPKVTG LIVCIDR+TRLVKSQQGAGKEY+ V+KLHG LGENPV+++RR V++LTGALFQRPPLISAVKRQLRIRT+Y++KLLE+D+K+ L VFWVKCEAGTYIRTLCVHLGYLLGVGG+M ELRR+RSG+MGE+  M TMHDVLDA WV++N RDESYLR+VI+PLE+LL  +KR+V KD+AVN+ICYGAVLMIPG+LRF+D IEV +EIV++TTKGEA+A+A+AEMNTAV+ATCDHGR+ARIKRV+MERDTYPR WGLGP+A KKKGL+++GKLDKHG+PNE TP +W +   DL +          V    P N      +  +  K  A +  P  +VE+A TP+    K
Sbjct:    8 EEYIIKPESKTPALDTSKWPLLLKNYDALNVRTAHFTPIPVGCSPHKRPLHDYVRYGVINLDKPANPSSHEVVAWIKRILKVDKTGHSGTLDPKVTGCLIVCIDRSTRLVKSQQGAGKEYVAVVKLHGSLGENPVTQMRRGVDLLTGALFQRPPLISAVKRQLRIRTVYQSKLLEFDDKRNLGVFWVKCEAGTYIRTLCVHLGYLLGVGGNMQELRRIRSGVMGEDTGMYTMHDVLDAQWVYENNRDESYLRTVIKPLESLLTGHKRVVAKDSAVNSICYGAVLMIPGLLRFEDGIEVGEEIVIMTTKGEAVALAVAEMNTAVMATCDHGRIARIKRVVMERDTYPRKWGLGPMASKKKGLVQQGKLDKHGRPNESTPKEWGQMQPDLSVAAAVAAVTSPVKADAPSND----AMEVSTPKTDAGEATPGDKVENATTPDTSEKK 448          
BLAST of Gvermi8808.t1 vs. uniprot
Match: A0A7S0ZE13_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE13_9RHOD)

HSP 1 Score: 612 bits (1578), Expect = 3.120e-215
Identity = 287/393 (73.03%), Postives = 347/393 (88.30%), Query Frame = 0
Query:    9 DKQHD-QFVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDL 400
            +KQ D  F+++P  + P L T++WPLLLK+YD+LNVRSSH+TPIP G+SPLKRP++EY+RYG+INLDKP+NPSSHEVVAWIK+ILR +KTGHSGTLDPKVTG LIVCIDRATRLVKSQQ AGKEY+GV +LH  LGEN + K+ RA+EMLTGA+FQRPPLISAVKRQLR+RTIYE+KL+EYD+++RL VFWV CEAGTYIRTLCVHLG LLGVGG M ELRRVRSG  GE E MVTMHDVLDA W +DN +DE+YLR V++PLEALLV + R+++KD++VNA+CYGA LMIPG+LRF+DDIEV QE+V++TTKGEA+A+AIAEM +A++ATCDHG VARIKRVIMERDTYPR WGLGP+A KKK ++++GKLDKHGK N+ TPA W K++  L
Sbjct:   16 EKQRDGSFLIEPSHAGPSLSTADWPLLLKNYDRLNVRSSHYTPIPCGNSPLKRPLIEYLRYGMINLDKPANPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQSAGKEYVGVFRLHASLGENALPKIERALEMLTGAVFQRPPLISAVKRQLRVRTIYESKLIEYDDERRLGVFWVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGAQGEGEGMVTMHDVLDAQWTYDNTKDETYLRRVVKPLEALLVKHSRLIIKDSSVNAVCYGAKLMIPGLLRFEDDIEVGQEVVIVTTKGEAVALAIAEMTSAIMATCDHGVVARIKRVIMERDTYPRRWGLGPMASKKKQMVKDGKLDKHGKSNDQTPASWTKEHPSL 408          
BLAST of Gvermi8808.t1 vs. uniprot
Match: A0A7S1TLW0_9RHOD (Hypothetical protein n=2 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLW0_9RHOD)

HSP 1 Score: 607 bits (1565), Expect = 1.290e-213
Identity = 287/401 (71.57%), Postives = 349/401 (87.03%), Query Frame = 0
Query:    8 DDKQHDQFVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLPQTEQP 408
            D ++  +F +KP ++ P LDTS WPLLLK++DKLNVRS+H+TPIP GHSPLKRP+ EY+RYG+INLDKP+NPSSHEVVAW+KKILR +KTGHSGTLDP+VTG LIVCIDRATRLVKSQQ AGKEY+GVL+LH  LG+N  ++++RAVE LTGA+FQRPPLISAVKRQLRIRTIYE++L+EYD+ +RL VFWV CEAGTYIRTLCVHLG LLGVGG M ELRRVRSG   E E +V+MHDVLDA W++DN +DESYLR V++PLEALLV + R+V+KD++VNAICYGA LMIPG+LR++DDIEV QEIV+++TKGEA+A+AIAEM +AV+ATCDHG VARIKRVIMERDTYPR WGLGP+A KKK ++++GKL KHG+ NE+TPA W K++  L  P  + P
Sbjct:    7 DAQRASEFQIKPESAAPALDTSEWPLLLKNFDKLNVRSAHYTPIPSGHSPLKRPLQEYLRYGMINLDKPANPSSHEVVAWVKKILRCEKTGHSGTLDPQVTGCLIVCIDRATRLVKSQQSAGKEYVGVLRLHASLGDNAEARVKRAVETLTGAVFQRPPLISAVKRQLRIRTIYESRLIEYDDARRLGVFWVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGAQSEREGLVSMHDVLDAQWLYDNNKDESYLRRVVKPLEALLVKHPRVVIKDSSVNAICYGAKLMIPGLLRYEDDIEVGQEIVIVSTKGEAVALAIAEMTSAVMATCDHGVVARIKRVIMERDTYPRRWGLGPMASKKKQMVKDGKLTKHGRTNENTPASWSKEHPKLSPPLEQAP 407          
BLAST of Gvermi8808.t1 vs. uniprot
Match: A0A830CJ24_9LAMI (H/aca ribonucleoprotein complex subunit 4 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CJ24_9LAMI)

HSP 1 Score: 603 bits (1555), Expect = 1.150e-210
Identity = 303/458 (66.16%), Postives = 370/458 (80.79%), Query Frame = 0
Query:    3 TSTEKDDKQHD--QFVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLPQTEQPPNQNVSVALPENGEAK-AGINGAAKKETAVDEAPSMEVEDAITPENKSDK 457
            + T++DD+Q+D   +++KP +  P +DTS WP+LLK+YDKLNVR+ H+TP+P G+SPLKRP+ EY++YGV+NLDKP+NPSSHEVVAWIK+ILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ + +LH  + E  V+K+ +A+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD  K L VFW+ CEAGTY+RT+CVHLG+LLGVG  M ELRRVRSGI+GE++NMVTMHDV+D  W++DN RDESYLR VI PLE +L +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV +EIVL+TTKGEAIA+ IAEM TAV+ATCDHG VA+IKRV+M+RDTYPR WGLGP A  KK LI EGKLDK GKPNE TPA+W +                  +V LP  G+A  AG++   + E A  E+  +EVE    P+ K DK
Sbjct:   17 SKTKEDDQQNDAVDYLIKPQSYTPSIDTSQWPILLKNYDKLNVRTGHYTPLPSGYSPLKRPLAEYIKYGVLNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHSKVPE--VAKVSKALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGHLLGVGAHMQELRRVRSGILGEKDNMVTMHDVMDGQWMYDNYRDESYLRRVIMPLEVILTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEIVLMTTKGEAIALGIAEMPTAVMATCDHGTVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIAEGKLDKRGKPNESTPAEWMR------------------NVVLPTGGDAVVAGLSAVPEAEKA--ESGGLEVEGK--PKKKKDK 450          
BLAST of Gvermi8808.t1 vs. uniprot
Match: A0A251P3U3_PRUPE (Uncharacterized protein n=17 Tax=Amygdaloideae TaxID=171637 RepID=A0A251P3U3_PRUPE)

HSP 1 Score: 604 bits (1557), Expect = 1.860e-210
Identity = 290/387 (74.94%), Postives = 338/387 (87.34%), Query Frame = 0
Query:    7 KDDKQHDQFVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADW 393
            KDD     F++KP +S P +DTS WP+LLK+YD+LNVR+ H+TP+P G+SPLKRP+ EY+RYGVINLDKP+NPSSHEVVAWIK+ILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ V +LH  + +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLE+D  K L VFW+ CEAGTY+RTLCVHLG LLGVGG M ELRRVRSGIMGE++NMVTMHDV+DA WV+DN RDESYLR +I PLE LL +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV +E+VL+TTKGEAIA+ IAEM TAV+ATCDHG VA+IKRV+M+RDTYPR WGLGP A  KK LI EGKLDKHGKP E TP +W
Sbjct:   30 KDDDLDKDFMIKPQSSTPSMDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPD--VAKVARALEALTGAVFQRPPLISAVKRQLRIRTIYESKLLEFDADKHLVVFWISCEAGTYVRTLCVHLGLLLGVGGHMQELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNHRDESYLRRIIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIAEGKLDKHGKPTESTPQEW 414          
BLAST of Gvermi8808.t1 vs. uniprot
Match: A0A5B6ZX74_DAVIN (Putative H/ACA ribonucleoprotein complex subunit 4 (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZX74_DAVIN)

HSP 1 Score: 599 bits (1545), Expect = 3.700e-210
Identity = 287/393 (73.03%), Postives = 344/393 (87.53%), Query Frame = 0
Query:   11 QHDQFVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLP 403
            Q D +++KP +  P +DTS WP+LLK+YD+LNVR+ H+TP+P G+SPLKRP+ EY+RYGVINLDKP+NPSSHEVVAWIK+ILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ + +LH  + +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLE+D  K LAVFW+ CEAGTY+RTLCVHLG +LGVG  M ELRRVRSGI+GE++NMVTMHDV+DA WV+DN RDESYLR VI PLE +L +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV +EIVL+TTKGEA+A+ IAEM TAV+ATCDHG VARIKRV+M+RDTYPR WGLGP A  KK LI EGKL KHGKPNE+TP++W    ++++LP
Sbjct:   31 QTDDYLIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHSSVPD--VAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEFDPDKHLAVFWISCEAGTYVRTLCVHLGLILGVGAHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEIVLMTTKGEAVALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYPRKWGLGPRASMKKKLIGEGKLSKHGKPNENTPSEW---LRNVVLP 418          
BLAST of Gvermi8808.t1 vs. uniprot
Match: B9SBQ8_RICCO (Centromere/microtubule binding protein cbf5, putative n=1 Tax=Ricinus communis TaxID=3988 RepID=B9SBQ8_RICCO)

HSP 1 Score: 602 bits (1551), Expect = 9.630e-210
Identity = 300/445 (67.42%), Postives = 358/445 (80.45%), Query Frame = 0
Query:    9 DKQHDQFVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLPQTEQPPNQNVSVALPENGEAKAGINGAAK------KETAVDEAPSMEVED 447
            D++ D  ++KP +  P  DTSNWP+LLK+YD+LNVR+ H+TP+P GHSPLKRP+ EY+RYGV+NLDKP+NPSSHEVVAWIK+ILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ V +LH  + +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD  + L VFW+ CEAGTY+RT+CVHLG +LGVGG M ELRRVRSGI+GE++NMVTMHDV+DA WV DN RDE+YLR VI PLE LL +YKR+VVKD+AVNAICYGA LMIPG+LRF++D+E  +E+VL+TTKGEAIA+ IAEM TAV+ATCDHG VA+IKRV+M+RDTYPR WGLGP A  KK LI EGKLDKHGKPNE+TP +W +                   VALP  G+A      AAK      KETA  +  + EVE+
Sbjct:   10 DQEQDLTMIKPQSFTPPNDTSNWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYIRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHDKVPD--VAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVFWISCEAGTYVRTMCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVFDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPKASMKKKLIAEGKLDKHGKPNENTPQEWMRNL-----------------VALPTGGDAIVASTAAAKGSATENKETAALKKETGEVEE 435          
BLAST of Gvermi8808.t1 vs. uniprot
Match: A0A6J1CVU2_MOMCH (H/ACA ribonucleoprotein complex subunit 4 n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1CVU2_MOMCH)

HSP 1 Score: 602 bits (1551), Expect = 9.960e-210
Identity = 289/400 (72.25%), Postives = 347/400 (86.75%), Query Frame = 0
Query:    4 STEKDDKQHDQFVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLP 403
            S E+  K    F++KP +  P +DTS WP+LLK+YD+LNVR+ H+TP+P G+SPLKRP+ EY+RYG++NLDKP+NPSSHEVVAWIK+ILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ + +LH  + +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD +K L VFW+ CEAGTY+RTLCVHLG +LGVGG M ELRRVRSGI+GE++NMVTMHDV+DA WV+DN +DESYLR VI PLE +L +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV +E+VL+TTKGEAIA+ IAEM TAV+ATCDHG VA+IKRV+M+RDTYPR WGLGP A  KK LI EGKLDKHGKPNE+TP +W    ++L+LP
Sbjct:   29 SDEQPQKDAADFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHSSVPD--VAKVSRALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDAEKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGIVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEW---LRNLVLP 423          
BLAST of Gvermi8808.t1 vs. uniprot
Match: UPI00125D9BD6 (H/ACA ribonucleoprotein complex subunit 4-like n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125D9BD6)

HSP 1 Score: 601 bits (1550), Expect = 1.270e-209
Identity = 288/389 (74.04%), Postives = 342/389 (87.92%), Query Frame = 0
Query:   15 FVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTPIPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKLRRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVKCEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDAMWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPGVLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRVIMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDLMLP 403
            +++KP +  P +DTS WP+LLK+YD+LNVR+ H+TP+P G+SPLKRP+ EY+RYGV+NLDKPSNPSSHEVVAWIK+ILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEY+ V +LH D+ +  V+K+ RA+E LTGA+FQRPPLISAVKRQLRIRTIYE+KLLEYD  + L VFW+ CEAGTY+RT+CVHLG LLGVGG M ELRRVRSGI GE++NMVTMHDV+DA WV+DN RDESYLR VI PLE LL +YKR+VVKD+AVNAICYGA LMIPG+LRF++DIEV +E+VL+TTKGEAIA+ IAEM TAV+ATCDHG VA+IKRV+M+RDTYPR WGLGP A  KK LI +GKLDKHGKPNE TPA+W    ++++LP
Sbjct:   38 YLIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVLNLDKPSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDVPD--VAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTMCVHLGLLLGVGGHMQELRRVRSGISGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPAEW---LRNVVLP 421          
The following BLAST results are available for this feature:
BLAST of Gvermi8808.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IM88_9FLOR1.630e-26884.27H/ACA ribonucleoprotein complex subunit 4 n=1 Tax=... [more]
R7Q3X0_CHOCR1.350e-22568.76Box H/ACA snoRNP rRNA pseudouridine syntase compon... [more]
A0A7S0ZE13_9RHOD3.120e-21573.03Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1TLW0_9RHOD1.290e-21371.57Hypothetical protein n=2 Tax=Erythrolobus australi... [more]
A0A830CJ24_9LAMI1.150e-21066.16H/aca ribonucleoprotein complex subunit 4 n=1 Tax=... [more]
A0A251P3U3_PRUPE1.860e-21074.94Uncharacterized protein n=17 Tax=Amygdaloideae Tax... [more]
A0A5B6ZX74_DAVIN3.700e-21073.03Putative H/ACA ribonucleoprotein complex subunit 4... [more]
B9SBQ8_RICCO9.630e-21067.42Centromere/microtubule binding protein cbf5, putat... [more]
A0A6J1CVU2_MOMCH9.960e-21072.25H/ACA ribonucleoprotein complex subunit 4 n=4 Tax=... [more]
UPI00125D9BD61.270e-20974.04H/ACA ribonucleoprotein complex subunit 4-like n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002478PUA domainSMARTSM00359pua_5coord: 278..352
e-value: 2.4E-18
score: 77.0
IPR002478PUA domainPFAMPF01472PUAcoord: 278..351
e-value: 3.4E-18
score: 65.4
IPR012960Dyskerin-likeSMARTSM01136DKCLD_2coord: 27..85
e-value: 7.2E-33
score: 125.2
IPR012960Dyskerin-likePFAMPF08068DKCLDcoord: 28..85
e-value: 2.5E-31
score: 107.5
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 61..269
e-value: 1.0E-174
score: 582.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..481
NoneNo IPR availablePANTHERPTHR23127:SF0H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT DKC1coord: 6..493
NoneNo IPR availablePROSITEPS50890PUAcoord: 277..352
score: 17.223557
NoneNo IPR availableCDDcd02572PseudoU_synth_hDyskerincoord: 67..251
e-value: 1.51699E-131
score: 376.987
IPR004802tRNA pseudouridine synthase B familyTIGRFAMTIGR00425TIGR00425coord: 35..362
e-value: 2.1E-154
score: 511.3
IPR004802tRNA pseudouridine synthase B familyPANTHERPTHR23127CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5coord: 6..493
IPR032819tRNA pseudouridylate synthase B, C-terminalPFAMPF16198TruB_C_2coord: 208..274
e-value: 5.9E-21
score: 74.4
IPR036974PUA domain superfamilyGENE3D2.30.130.10PUA domaincoord: 28..361
e-value: 1.0E-174
score: 582.2
IPR002501Pseudouridine synthase II, N-terminalPFAMPF01509TruB_Ncoord: 89..207
e-value: 1.3E-19
score: 71.1
IPR004521Uncharacterised domain CHP00451TIGRFAMTIGR00451TIGR00451coord: 269..347
e-value: 4.8E-9
score: 34.4
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 28..275
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 277..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:95445..97053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8808.t1Gvermi8808.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 95445..97053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8808.t1 ID=Gvermi8808.t1|Name=Gvermi8808.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=498bp
MGTSTEKDDKQHDQFVLKPFASKPELDTSNWPLLLKDYDKLNVRSSHFTP
IPVGHSPLKRPILEYMRYGVINLDKPSNPSSHEVVAWIKKILRVDKTGHS
GTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYIGVLKLHGDLGENPVSKL
RRAVEMLTGALFQRPPLISAVKRQLRIRTIYEAKLLEYDEKKRLAVFWVK
CEAGTYIRTLCVHLGYLLGVGGSMLELRRVRSGIMGEEENMVTMHDVLDA
MWVHDNQRDESYLRSVIQPLEALLVNYKRIVVKDTAVNAICYGAVLMIPG
VLRFDDDIEVSQEIVLITTKGEAIAIAIAEMNTAVIATCDHGRVARIKRV
IMERDTYPRAWGLGPVAGKKKGLIREGKLDKHGKPNEHTPADWQKKYKDL
MLPQTEQPPNQNVSVALPENGEAKAGINGAAKKETAVDEAPSMEVEDAIT
PENKSDKKKKDKSSKKKRKREDAADAPESEKKKKKKKKKKKESTVDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002478PUA
IPR012960Dyskerin-like
IPR004802tRNA_PsdUridine_synth_B_fam
IPR032819TruB_C
IPR036974PUA_sf
IPR002501PsdUridine_synth_N
IPR004521Uncharacterised_CHP00451
IPR020103PsdUridine_synth_cat_dom_sf
IPR015947PUA-like_sf