Gvermi8208.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8208.t1
Unique NameGvermi8208.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length103
Homology
BLAST of Gvermi8208.t1 vs. uniprot
Match: A0A2V3IGY7_9FLOR (NADH-u_ox-rdase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGY7_9FLOR)

HSP 1 Score: 159 bits (401), Expect = 1.230e-48
Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    1 MAHPINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAA---VVMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKYGPKKIASESS 101
            MAHPINDP FP+ID DP+FGKVMS+ R SDW+NA LAT +S+PFGYAA   V+MRPSMYMAG+IGASFGLFLGFQNSF RLTGYKENA E AK+  +K  S +S
Sbjct:    1 MAHPINDPKFPVIDRDPSFGKVMSAFRTSDWQNATLATVLSVPFGYAAGRPVLMRPSMYMAGIIGASFGLFLGFQNSFARLTGYKENAAEAAKFASEKSVSGTS 104          
BLAST of Gvermi8208.t1 vs. uniprot
Match: R7Q7T4_CHOCR (NADH-ubiquinone oxidoreductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7T4_CHOCR)

HSP 1 Score: 134 bits (338), Expect = 3.550e-38
Identity = 68/105 (64.76%), Postives = 81/105 (77.14%), Query Frame = 0
Query:    1 MAHPINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAA---VVMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKYGPKKIASESSA 102
            M +PIN PT  +I  DP+FG+VMS+ RA DW+N ALAT +S+PFGY A   +VMRPSMY A  IGA FGL LGFQ+SF RLTGYKENA+EVAKY P + A ES+A
Sbjct:   68 MTYPINPPTHQVITRDPSFGQVMSAFRAGDWQNLALATGISMPFGYWAGRPIVMRPSMYAAATIGALFGLSLGFQSSFARLTGYKENALEVAKYSPSQSA-ESTA 171          
BLAST of Gvermi8208.t1 vs. uniprot
Match: A0A6V2QQX1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2QQX1_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.880e-11
Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 0
Query:    4 PINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAVVMRP----SMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKYGPKKI 96
            P +DP FP+++ DP+    ++SLR  D+   AL       +GY  +V +P    +   A  IG +F  F+  Q++  RL GYKEN +EV KYG  KI
Sbjct:    2 PYSDPKFPVVNNDPSVDDCINSLRKRDYM--ALFGLTGASWGYGYMVGKPLRGATASTAAAIGFTFASFVVLQDTRSRLLGYKENGVEVKKYGLCKI 96          
BLAST of Gvermi8208.t1 vs. uniprot
Match: A0A7S0WTB3_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WTB3_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 8.360e-11
Identity = 36/96 (37.50%), Postives = 50/96 (52.08%), Query Frame = 0
Query:    1 MAHPINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAV-----VMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKY 91
            M   +++P + +ID  P   K   +    D + AA ATF +  +G  A      +  PS YM   IG + G  L +QNS GRL G+KEN  EVAK+
Sbjct:    1 MGIILDEPKYKVIDSAPGLAKCFGNCSFEDMKIAAGATFAATTYGCLAGKGVKGMAGPSAYMGLAIGVTAGALLAYQNSAGRLMGFKENPDEVAKF 96          
BLAST of Gvermi8208.t1 vs. uniprot
Match: A0A8H7VPA5_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VPA5_9FUNG)

HSP 1 Score: 57.8 bits (138), Expect = 3.320e-8
Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = 0
Query:   10 FPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAVV-------------MRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAK 90
            FP+ID DP+FG+V+ + R +D+   A +T ++     AAV+             +R  + ++ L GA  G  L +QNS  R  G+KENAIEV K
Sbjct:   10 FPVIDTDPSFGRVVRNFRTTDYATLAASTAIAP----AAVIGLEKFNPVAAGRSLRIPIRLSVLFGAFGGFLLAYQNSSLRFWGWKENAIEVTK 99          
BLAST of Gvermi8208.t1 vs. uniprot
Match: B8BVH7_THAPS (NADH-u_ox-rdase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVH7_THAPS)

HSP 1 Score: 53.9 bits (128), Expect = 5.500e-7
Identity = 30/93 (32.26%), Postives = 44/93 (47.31%), Query Frame = 0
Query:    4 PINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAVVMRPSMYMAGLIGASFGLFLG----FQNSFGRLTGYKENAIEVAKYG 92
            P  DP F +++  P   + + SLR SD+  A   T  S  +GY   + +P+         + G+        QN   RL GY+EN +EV KYG
Sbjct:    2 PYGDPKFTVVNPSPDVDQTLRSLRTSDYLLATFITSASWAYGYT--MGKPTRMACASTAMALGMTAAGMAVLQNGRSRLRGYRENEVEVKKYG 92          
BLAST of Gvermi8208.t1 vs. uniprot
Match: UPI001E8DC5F8 (NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit-domain-containing protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=UPI001E8DC5F8)

HSP 1 Score: 54.3 bits (129), Expect = 6.950e-7
Identity = 33/88 (37.50%), Postives = 45/88 (51.14%), Query Frame = 0
Query:   10 FPIIDGDPTFGKVMSSLRASDWRN--AALATFVSLPFGYAAV-----VMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAK 90
            +P+ID DPTFG+V+  +R SD+    AA A   +  +G   V       R +M + G +G S G  L +Q S  R  G  ENA E  K
Sbjct:   10 YPVIDADPTFGRVVRYMRPSDYATWAAAAAAGPAAFWGLERVDPSRASTRSAMKLVGFLGVSAGFLLAYQRSSFRFMGLSENASEAKK 97          
The following BLAST results are available for this feature:
BLAST of Gvermi8208.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IGY7_9FLOR1.230e-4873.08NADH-u_ox-rdase domain-containing protein n=1 Tax=... [more]
R7Q7T4_CHOCR3.550e-3864.76NADH-ubiquinone oxidoreductase n=1 Tax=Chondrus cr... [more]
A0A6V2QQX1_9STRA1.880e-1138.14Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0WTB3_9CHLO8.360e-1137.50Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A8H7VPA5_9FUNG3.320e-837.23Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
B8BVH7_THAPS5.500e-732.26NADH-u_ox-rdase domain-containing protein n=1 Tax=... [more]
UPI001E8DC5F86.950e-737.50NADH-ubiquinone oxidoreductase complex I, 21 kDa s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019721NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminalPFAMPF10785NADH-u_ox-rdasecoord: 8..83
e-value: 1.5E-17
score: 64.0
NoneNo IPR availablePANTHERPTHR34062OXIDOREDUCTASE 21 KDA SUBUNIT, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G04750)-RELATEDcoord: 6..95
NoneNo IPR availablePANTHERPTHR34062:SF1OXIDOREDUCTASE 21 KDA SUBUNIT, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G04750)-RELATEDcoord: 6..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..54
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:1568127..1568549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8208.t1Gvermi8208.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 1568127..1568549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8208.t1 ID=Gvermi8208.t1|Name=Gvermi8208.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=103bp
MAHPINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAVV
MRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKYGPKKIASES
SA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019721NADH-UbQ_OxRdtase_su21_N