Gvermi8205.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8205.t1
Unique NameGvermi8205.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length242
Homology
BLAST of Gvermi8205.t1 vs. uniprot
Match: A0A2V3IH11_9FLOR (Gamma carbonic anhydrase 2, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH11_9FLOR)

HSP 1 Score: 370 bits (950), Expect = 7.190e-128
Identity = 180/238 (75.63%), Postives = 208/238 (87.39%), Query Frame = 0
Query:    1 MQRAVLQRAVTHLRHFATKLAPPGNGPNHRSIMALDANTIRPYVQPNAFVAPSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVLTAGAVEGSMTPSDAVATGLTIEPELLVGDYCLIGANVTLKGCRIEGYNTIGHCSSVAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKVAQDAERRFAVTSSHAYEFLPVGFGYLEKEAMEAGKAAT 238
            M+RA+++RA  H R   +K APPG GPNHR+IM+LDA+TIRPYVQPNAFVAPSASVIGSVV+NDK+AIMYG V+RGDLALIQIGALT+IGEN VLTAGAV+G MTPSDAV+TGL +EPEL VGDYCLIGA VTLKGC + G N +GHCSSVAEGA +GR+A+LEPGTSVGEGV+IPE EVW GSPAQKVRD+T DEK ++ Q AERR++ T+SHAYEFLPVGFGYLEKEA+E   AA 
Sbjct:    1 MRRALVRRAAQHFRSLCSKPAPPGEGPNHRAIMSLDADTIRPYVQPNAFVAPSASVIGSVVINDKSAIMYGAVIRGDLALIQIGALTVIGENSVLTAGAVDGMMTPSDAVSTGLALEPELWVGDYCLIGAGVTLKGCHLMGDNIVGHCSSVAEGATLGRYAILEPGTSVGEGVSIPEGEVWGGSPAQKVRDVTDDEKLQMRQGAERRYSTTASHAYEFLPVGFGYLEKEALEKTDAAV 238          
BLAST of Gvermi8205.t1 vs. uniprot
Match: A0A075X1D4_NEOHI (Carbonic anhydrase 6 n=1 Tax=Neoporphyra haitanensis TaxID=1262161 RepID=A0A075X1D4_NEOHI)

HSP 1 Score: 191 bits (486), Expect = 8.440e-57
Identity = 107/219 (48.86%), Postives = 133/219 (60.73%), Query Frame = 0
Query:   20 LAPPGNGPNHRSIMALDANTIRPYVQPNAFVAPSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVLTA---GAVEGS------MTPSDAVATGLTIEPELLVGDYCLIGANVTLKGCRIEGYNTIGHCSSVAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKVAQDAERRFAVTSSHAYEFLPVGFGYLEKE 229
            +APP   PNHRS++ALD NTI P+VQPNA+VAPSASVIGSVVVND++A+M G VVRGDLA ++IGA TIIG+NCVL+A   G  EG       ++ +DAVA GL +EP L VGDY  +  N  L GC +EG N IG  + +  GAV                      E W G PA K+RD+  DEK    ++A     V + +A EFLP G  Y E E
Sbjct:   68 VAPPSRTPNHRSLLALDENTIVPFVQPNAYVAPSASVIGSVVVNDQSAVMNGAVVRGDLAYLRIGAFTIIGDNCVLSAEGPGTGEGGAADADRLSATDAVAAGLAMEPALFVGDYVDVAPNCVLTGCTLEGENAIGANTVIEPGAVXXXXXXXXXXXXXXXXXXXXXXEAWGGVPAVKLRDLDGDEKDAFGKNALENVKVAARYAAEFLPTGTVYWEAE 286          
BLAST of Gvermi8205.t1 vs. uniprot
Match: A0A8E8PGR1_NEOYE (Gama-carbonic anhydrase n=1 Tax=Neopyropia yezoensis TaxID=2788 RepID=A0A8E8PGR1_NEOYE)

HSP 1 Score: 191 bits (485), Expect = 1.190e-56
Identity = 106/221 (47.96%), Postives = 136/221 (61.54%), Query Frame = 0
Query:   20 LAPPGNGPNHRSIMALDANTIRPYVQPNAFVAPSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVLTA---GAVEGS----MTPSDAVATGLTIEPELLVGDYCLIGANVTLKGCRIEGYNTIGHCSSVAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKVAQDAERRFAVTSSHAYEFLPVGFGYLEKEAMEA 233
            +APP   PNHRS++ALD NTI P+VQPNA+VAPSASVIGSVV+ND++A+M G VVRGDLA ++IGA TIIG+NCVL+A   G  EG     ++ SDAVATGL++EP L VGDY  +  N  L GC +EG N IG  + +                           E W G PA K+RD+  DEK    +++     +T+ +A EFLPVG  Y E E + A
Sbjct:   70 VAPPSTTPNHRSLLALDENTIVPFVQPNAYVAPSASVIGSVVINDQSAVMTGAVVRGDLAFLRIGAFTIIGDNCVLSAEGPGGGEGGSADRLSASDAVATGLSMEPALFVGDYVDVAPNCVLNGCTLEGENAIGANTVIXXXXXXXXXXXXXXXXXXXXXXXXXGGEAWGGVPAVKLRDLDGDEKEAFVKNSMDNVKMTARYASEFLPVGTVYWEAERVSA 290          
BLAST of Gvermi8205.t1 vs. uniprot
Match: A0A1X6P188_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P188_PORUM)

HSP 1 Score: 164 bits (414), Expect = 9.690e-47
Identity = 94/199 (47.24%), Postives = 117/199 (58.79%), Query Frame = 0
Query:   46 PNAFVAPSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVLTAGAVEG--------SMTP---SDAVATGLTIEPELLVGDYCLIGANVTLKGCRIEGYNTIGHCSSVAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKVAQDAERRFAVTSSHAYEFLPVGFGYLEKEAMEA 233
            PNA+VAPSASVIGSVV+ND++A+M G VVRGDLA ++IGA T+IG+NCVL+A A  G        S TP   +DAVATGL +EP L VGDY  +  N  L GC + G N IG  + +  GA                    PE E W G PA K+RD+  DEK   A++A     + + +A EFLPVG  Y E E M A
Sbjct:   31 PNAYVAPSASVIGSVVINDQSAVMNGAVVRGDLAYLRIGAFTVIGDNCVLSADAPGGGGGVGTVDSSTPLSAADAVATGLAMEPALFVGDYVDVAPNCVLTGCTLSGENAIGANTVIGPGAXXXXXXXXXXXXXXXXXXXXPEGEAWGGVPAVKLRDLDGDEKDAFAKNAAENAKMAARYASEFLPVGTVYWEAERMTA 229          
BLAST of Gvermi8205.t1 vs. uniprot
Match: M2VW39_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VW39_GALSU)

HSP 1 Score: 141 bits (356), Expect = 9.160e-38
Identity = 81/221 (36.65%), Postives = 120/221 (54.30%), Query Frame = 0
Query:   14 RHFATKLAPPGNGPNHRSIMALDANTIRPYVQPNAFVAPSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVLTAGAVE--GSMTPSDAVATGLTIEPELLVGDYCLIGANVTLKGCRIEGYNTIGHCSSVAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKVAQDAERRFAVTSSHAYEFLPVGFGYLEKEAME 232
            R + + +A P    NHR++MALD + IRP    NAFVAPSASVIG+V + +K  + YG+V+R D A I +   ++I +NCVLT    +  G + P +             +G + +I ++  L+ C I+    IG  S +  GA +    V+ P + V    +IP  EVW G+PA+ +R + PD+     Q AE  F  T  H  EF P GF Y+EKE ++
Sbjct:   42 RTWCSGVALPDLSSNHRNVMALDKDRIRPIHANNAFVAPSASVIGAVDLAEKVVVWYGSVLRADFAEIVVSGFSVIEDNCVLTVVPPKRSGELKPIN-------------IGSWVVIESHSILQSCTIDSRTRIGAHSVIEPGAHIDMDCVILPHSVVSANQSIPTGEVWGGNPAKFIRKVDPDQVEDTIQQAENMFYFTKQHIVEFFPKGFAYIEKERLQ 249          
BLAST of Gvermi8205.t1 vs. uniprot
Match: A0A7S2ZNU4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZNU4_9RHOD)

HSP 1 Score: 124 bits (310), Expect = 1.090e-30
Identity = 71/220 (32.27%), Postives = 116/220 (52.73%), Query Frame = 0
Query:   26 GPNHRSIMALDANTIRPYVQPNAFVAPSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVLTAGAVEGSMTPSDAVATGLTIEPELLVGDYCLIGANVTLKGCRIEGYNTIGHCSSVAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKVAQDAERRFAVTSS----HAYEFLPVGFGYLEKEAMEAGKAATVPE 241
            G NHR ++ LD + IRP+++ +AF+APSA+++G   ++ KT +M+ +V+RGDLA   +GA  +I EN V  AG +     PS  V+          + DYC IG+   L+ C I+ Y  +G+ S + E   VG  +++EP + V  G  IP  ++W G+PA+   ++   +K   A       A+       +   +LP    +LEKE +   +   V E
Sbjct:   64 GLNHRCVLTLDNDMIRPFIKKDAFIAPSATIVGYTGISFKTCVMHNSVIRGDLAYCYVGAYCVIEENVVAVAGTIAN---PSGDVS----------IEDYCYIGSGSVLRSCTIQRYAIVGNGSIIEENVFVGEASIVEPKSVVPAGTEIPTGQIWGGNPAKFKGNV---DKFTFADRGNEMRAMCKQILKWYKPMYLPYSLAWLEKEVLSRRRETEVAE 267          
BLAST of Gvermi8205.t1 vs. uniprot
Match: A0A7S1CBV1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBV1_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.450e-26
Identity = 69/187 (36.90%), Postives = 98/187 (52.41%), Query Frame = 0
Query:   42 PYVQPNAFVAPSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVL-TAGAVEGSMTPSDAVATGLTIEPELLVGDYCLIGANVTLKGCRIEGYNTIGHCSSVAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKVAQDAERRFAVTSSHAYEFLPVGFGYLE 227
            P V+ N FVAPSA+VIG V +  K+++ YG VVRGD+  ++IG  + IG+  V+ T  +VEG    +              +GDY  +G    L+ C IE    IG  + V EGA+V              G  IP  ++WAG+PAQ VR++T +E +    DAE    +   HA+EFLP G  Y +
Sbjct:   70 PEVENNVFVAPSATVIGHVQILHKSSVWYGAVVRGDVNAVEIGGYSSIGDRAVVSTTKSVEGRPAAT------------CRIGDYVTVGPGALLQSCTIENGVKIGAGAVVMEGALVXXXXXXXXXXXXXXGRRIPSGQLWAGNPAQFVRNLTKEELATFEGDAEFVADLGGEHAHEFLPAGGAYTD 244          
BLAST of Gvermi8205.t1 vs. uniprot
Match: A0A0D5CNI8_9CHLO (Gamma type carbonic anhydrase n=1 Tax=Lobosphaera incisa TaxID=312850 RepID=A0A0D5CNI8_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 5.420e-25
Identity = 71/190 (37.37%), Postives = 102/190 (53.68%), Query Frame = 0
Query:   29 HRSIMALDANTIRPYVQPNAFVAPSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVLTAGAVEGSMTPSDAVATGLTIEPE-LLVGDYCLIGANVTLKGCRIEGYNTIGHCSSVAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKVAQDAERRFAVTSSHAYE 217
            HR +M L  +T +P VQP+AFVAPSASVIG V +   +++ YG V+RGD+  I +G      EN  L  G V  +      VAT L   P    +G    +G   TL GC IE  + IG  +++ EG  V + A++  G  V     +P  EVW G+PA+ +R + P+EKS +   A++  A+   H  E
Sbjct:   39 HRPVMNL--STRKPDVQPSAFVAPSASVIGQVTLGKNSSVWYGCVLRGDMGHISVG------ENSNLQDGTVVRT------VATYLASRPAGTHIGKNVTVGHFATLNGCTIEDESLIGMGATLLEGVRVEKNAMVAAGAVVQPQTVVPSGEVWGGNPARFLRALKPEEKSFMVTSADKYAALAGEHKQE 214          
BLAST of Gvermi8205.t1 vs. uniprot
Match: A0A5A8CT95_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CT95_CAFRO)

HSP 1 Score: 106 bits (264), Expect = 2.200e-24
Identity = 67/202 (33.17%), Postives = 103/202 (50.99%), Query Frame = 0
Query:   29 HRSIMALDANTIRPYVQPNAFVAPSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVLT-AGAVEGSMTPSDAVATGLTIEPELLVGDYCLIGANVTLKGCRIEGYNTIGHCSSVAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKVAQDAERRFAVTSSHAYEFLPVGFGYLEKE 229
            HR +M L      P   P+ FVAP+A+V+G+V +  K+ + YG VVRGD A ++IG  T I +  V+T A  VEG  +    + + +T+ P               L+ C +EG+N IG  + V +G                 G  IP  ++WAG+PA+ VR++T +E + +  DAE   ++   HA EFLP    +L+ E
Sbjct:   40 HRPVMNLFDK--HPVTDPSVFVAPNATVVGNVTIAHKSNVWYGAVVRGDQARVEIGGYTNIQDRAVVTTAKEVEGQSSGVTKIGSHVTVCP------------GAVLRSCVVEGHNRIGAGAVVNDGXXXXXXXXXXXXXXXHPGRRIPGGQLWAGNPAEFVRNLTKEEMAALEIDAEAASSLAEEHAAEFLPTSAVHLDAE 227          
BLAST of Gvermi8205.t1 vs. uniprot
Match: A0A0K9RLH3_SPIOL (Uncharacterized protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RLH3_SPIOL)

HSP 1 Score: 106 bits (265), Expect = 3.220e-24
Identity = 66/191 (34.55%), Postives = 105/191 (54.97%), Query Frame = 0
Query:   29 HRSIMALDANTIRPYVQPNAFVAPSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVLTAGA--VEGSMTPSDAVATGLTIEPELLVGDYCLIGANVTLKGCRIEGYNTIGHCSSVAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKVAQDAERRFAVTSSHAYE 217
            HR++M +     +P+V   AFVAPSAS+IG V V  +++I YG V+RGD+  I IG+ T I +N ++      + G + P+             ++GD   +G +  L GC +E    IG  +++ +G +V + A++  G+ V +   IP  EVWAG+PA+ VR IT DE + ++Q A     +   HA E
Sbjct:   42 HRTLMNVFDK--KPFVDKEAFVAPSASIIGDVQVGHRSSIWYGCVLRGDVNFISIGSGTNIQDNSLVHVAKSNLSGKVLPT-------------IIGDNVTVGHSAVLHGCTVEDEAFIGTGATLLDGVLVEKHAMVAAGSLVRQNTRIPCGEVWAGNPAKFVRKITEDEMTFISQSANNYHNLAQVHATE 217          
The following BLAST results are available for this feature:
BLAST of Gvermi8205.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH11_9FLOR7.190e-12875.63Gamma carbonic anhydrase 2, mitochondrial n=1 Tax=... [more]
A0A075X1D4_NEOHI8.440e-5748.86Carbonic anhydrase 6 n=1 Tax=Neoporphyra haitanens... [more]
A0A8E8PGR1_NEOYE1.190e-5647.96Gama-carbonic anhydrase n=1 Tax=Neopyropia yezoens... [more]
A0A1X6P188_PORUM9.690e-4747.24Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2VW39_GALSU9.160e-3836.65Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S2ZNU4_9RHOD1.090e-3032.27Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1CBV1_9STRA4.450e-2636.90Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A0D5CNI8_9CHLO5.420e-2537.37Gamma type carbonic anhydrase n=1 Tax=Lobosphaera ... [more]
A0A5A8CT95_CAFRO2.200e-2433.17Uncharacterized protein n=3 Tax=Sar TaxID=2698737 ... [more]
A0A0K9RLH3_SPIOL3.220e-2434.55Uncharacterized protein n=1 Tax=Spinacia oleracea ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10Hexapeptide repeat proteinscoord: 33..217
e-value: 2.7E-35
score: 123.2
NoneNo IPR availablePANTHERPTHR13061DYNACTIN SUBUNIT P25coord: 28..232
NoneNo IPR availableCDDcd04645LbH_gamma_CA_likecoord: 44..206
e-value: 3.58735E-41
score: 136.387
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 41..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:1564392..1565117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8205.t1Gvermi8205.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 1564392..1565117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8205.t1 ID=Gvermi8205.t1|Name=Gvermi8205.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=242bp
MQRAVLQRAVTHLRHFATKLAPPGNGPNHRSIMALDANTIRPYVQPNAFV
APSASVIGSVVVNDKTAIMYGTVVRGDLALIQIGALTIIGENCVLTAGAV
EGSMTPSDAVATGLTIEPELLVGDYCLIGANVTLKGCRIEGYNTIGHCSS
VAEGAVVGRFAVLEPGTSVGEGVTIPEEEVWAGSPAQKVRDITPDEKSKV
AQDAERRFAVTSSHAYEFLPVGFGYLEKEAMEAGKAATVPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011004Trimer_LpxA-like_sf