Gvermi8156.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8156.t1
Unique NameGvermi8156.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length204
Homology
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BLAST of Gvermi8156.t1 vs. uniprot
Match: R7Q4N4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4N4_CHOCR)

HSP 1 Score: 55.8 bits (133), Expect = 6.870e-7
Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 0 
Query:  123 KRGSKKYVPFAKERKLYEEAKKKRDEXXXXXXXXXXXXXXXXKCSKKKRKQQAKQYRAVTNRGQPRMKHRIDALLARIE 201
            KR  KKY+PF K+ K  E+A+K+R  XXX             K SKK+R++++K YR VT +GQP +KH++D +L++I+
Sbjct:   25 KRKPKKYLPFTKQMKQAEQARKERXXXXXEREIKIKTRENRLKLSKKERRKRSKLYRKVTTKGQPLLKHKLDMMLSQIQ 103
The following BLAST results are available for this feature:
BLAST of Gvermi8156.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q4N4_CHOCR6.870e-743.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..161
IPR013730Fyv7/TAP26PFAMPF08524rRNA_processingcoord: 123..202
e-value: 6.1E-10
score: 39.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:1315404..1316161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8156.t1Gvermi8156.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 1315404..1316161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8156.t1 ID=Gvermi8156.t1|Name=Gvermi8156.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=204bp
MNESAALIARRTQAARDALRRRQKEKKARIVKKHVRYKQKQKLLSQLALS
ENEAPIVATEFARIGDEEEHHPTRKLARVNDGSQVEPSTPPAESGGDGRA
PSAGSPENRLQVTAGGDDGANPKRGSKKYVPFAKERKLYEEAKKKRDEQH
KEQEQKIKQREEMLKCSKKKRKQQAKQYRAVTNRGQPRMKHRIDALLARI
EKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013730Fyv7/TAP26