Gvermi8153.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8153.t2
Unique NameGvermi8153.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length251
Homology
BLAST of Gvermi8153.t2 vs. uniprot
Match: A0A2V3J599_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J599_9FLOR)

HSP 1 Score: 155 bits (393), Expect = 5.430e-43
Identity = 96/255 (37.65%), Postives = 144/255 (56.47%), Query Frame = 0
Query:    1 MESANSTASSQVQTFSTAALLLLVGVVDLIWYVRALLATREL--------SPWITATVVNMIFGGVFAVGYVFMRNGPAVFCIPSRVFAFLWPLLANFAVLWYMSYVIIAEKNVVLGVLPYSDGRLDSVVPMRTGGEQKKSQLIRVFAWLAVVVMAFACVRAAWKESLVAGWKS--ATAGAWGSFVYINCSAGVVFVAVYIVAREGA-CVGSALWVAALLLLGNMATFAYVAAVASRALATETPFPHVMLSMSRT 244
            M+S  +T+ S ++T+S AALL +     L  Y  A L T  L        S W      +  FG VFAV Y+F+RNGP+V CIP+++FAFLWP ++NFA+LWY++Y+I+  K++   ++PYS    +  VPMRT   ++ +Q++   A     V+    + A   ES    W    +    W +F Y +  AG++F A+YI+ REG     S LW  ALL+LGN  T  YV  +A +A++ + P  HV+LS  +T
Sbjct:    1 MDSTTATSPSLIKTYSIAALLFIASFAVLFAYTSAALETSLLNAPQDISQSGWAVVIFFDASFGAVFAVYYLFVRNGPSVACIPAKLFAFLWPFISNFALLWYVAYMILLHKDLRSALIPYSTAEANGQVPMRTQRNRRTAQIVASIASFLFFVIVVLDINAMRYESFSTAWTKLLSNQNKWITFTYADSLAGLLFTAIYIIEREGGPSPTSVLWAVALLVLGNAVTCVYVFLMALQAISEDVPITHVLLSSRKT 255          
BLAST of Gvermi8153.t2 vs. uniprot
Match: A0A2V3IJ70_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ70_9FLOR)

HSP 1 Score: 122 bits (307), Expect = 3.180e-30
Identity = 85/254 (33.46%), Postives = 138/254 (54.33%), Query Frame = 0
Query:    1 MESANSTASSQVQTFSTAALLLLVGV---VDLIWYVRALLATRELS-----PWITATVVNMIFGGVFAVGYVFMRNGPAVFCIPSRVFAFLWPLLANFAVLWYMSYVIIAEKNVVLGVLPYSDGRLDSV-VPMRTGGEQKKSQLIRVFAWLAVVVMAFACVRAAWKESLVAGWKSATAGAWGSFVYINCSAGVVFVAVYIVAREGA--CVGSALWVAALLLLGNMATFAYVAAVASRALATETPFPHVMLSMSR 243
            MES  +  +   Q +  AA L  VGV   + L+  +R    +  +S     PW  + + +   G  FA  YVF+R+GP VFC+ ++VFA ++P + NFA+LWY++Y+I+  K+V  G+LP +     +V + MR+   QK  + I V  +  ++  A  C  A+ ++SL  G++      W  F +I+   G++F  V+I+ REG   C+ S LW+  L+  GN  T  YV  VA +A + +  F  V+LS S+
Sbjct:    1 MESTTAANARATQAYIFAAFLTTVGVALFMSLVQTIRKSPLSEGISGIGESPWALSALADYFVGACFAALYVFLRDGPPVFCLSNKVFAVVFPFVGNFALLWYVAYLIVKAKDVTRGLLPQTVETPGNVEIDMRSSSTQKHPKTIGVAFFALLLWFAAVCFWASQRQSLQEGYRVLKMVKWAGFTFIDNLTGILFTVVFIIVREGEVNCITS-LWILGLVFFGNGPTCLYVIHVAQQAFSRDVSFSRVLLSRSK 253          
The following BLAST results are available for this feature:
BLAST of Gvermi8153.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J599_9FLOR5.430e-4337.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IJ70_9FLOR3.180e-3033.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 157..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..156
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 230..250
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 194..204
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 171..193
NoneNo IPR availableTMHMMTMhelixcoord: 200..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:1307569..1308321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8153.t2Gvermi8153.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 1307569..1308321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8153.t2 ID=Gvermi8153.t2|Name=Gvermi8153.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=251bp
MESANSTASSQVQTFSTAALLLLVGVVDLIWYVRALLATRELSPWITATV
VNMIFGGVFAVGYVFMRNGPAVFCIPSRVFAFLWPLLANFAVLWYMSYVI
IAEKNVVLGVLPYSDGRLDSVVPMRTGGEQKKSQLIRVFAWLAVVVMAFA
CVRAAWKESLVAGWKSATAGAWGSFVYINCSAGVVFVAVYIVAREGACVG
SALWVAALLLLGNMATFAYVAAVASRALATETPFPHVMLSMSRTPRARAT
*
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