Gvermi8153.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8153.t1
Unique NameGvermi8153.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length229
Homology
BLAST of Gvermi8153.t1 vs. uniprot
Match: A0A2V3J599_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J599_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 1.700e-25
Identity = 59/149 (39.60%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    1 MESANSTASSQVQTFSTAALLLLVGVVDLIWYVRALLATREL--------SPWITATVVNMIFGGVFAVGYVFMRNGPAVFCIPSRVFAFLWPLLANFAVLWYMSYVIIAEKNVVLGVLPYSDGRLDSVVPMRTGGEQKKSQLIRVFAA 141
            M+S  +T+ S ++T+S AALL +     L  Y  A L T  L        S W      +  FG VFAV Y+F+RNGP+V CIP+++FAFLWP ++NFA+LWY++Y+I+  K++   ++PYS    +  VPMRT   ++ +Q++   A+
Sbjct:    1 MDSTTATSPSLIKTYSIAALLFIASFAVLFAYTSAALETSLLNAPQDISQSGWAVVIFFDASFGAVFAVYYLFVRNGPSVACIPAKLFAFLWPFISNFALLWYVAYMILLHKDLRSALIPYSTAEANGQVPMRTQRNRRTAQIVASIAS 149          
BLAST of Gvermi8153.t1 vs. uniprot
Match: A0A2V3IJ70_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ70_9FLOR)

HSP 1 Score: 79.3 bits (194), Expect = 4.130e-14
Identity = 51/147 (34.69%), Postives = 82/147 (55.78%), Query Frame = 0
Query:    1 MESANSTASSQVQTFSTAALLLLVGV---VDLIWYVRALLATRELS-----PWITATVVNMIFGGVFAVGYVFMRNGPAVFCIPSRVFAFLWPLLANFAVLWYMSYVIIAEKNVVLGVLPYSDGRLDSV-VPMRTGGEQKKSQLIRV 138
            MES  +  +   Q +  AA L  VGV   + L+  +R    +  +S     PW  + + +   G  FA  YVF+R+GP VFC+ ++VFA ++P + NFA+LWY++Y+I+  K+V  G+LP +     +V + MR+   QK  + I V
Sbjct:    1 MESTTAANARATQAYIFAAFLTTVGVALFMSLVQTIRKSPLSEGISGIGESPWALSALADYFVGACFAALYVFLRDGPPVFCLSNKVFAVVFPFVGNFALLWYVAYLIVKAKDVTRGLLPQTVETPGNVEIDMRSSSTQKHPKTIGV 147          
The following BLAST results are available for this feature:
BLAST of Gvermi8153.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J599_9FLOR1.700e-2539.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IJ70_9FLOR4.130e-1434.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..228
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..77
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:1306819..1308321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8153.t1Gvermi8153.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 1306819..1308321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8153.t1 ID=Gvermi8153.t1|Name=Gvermi8153.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=229bp
MESANSTASSQVQTFSTAALLLLVGVVDLIWYVRALLATRELSPWITATV
VNMIFGGVFAVGYVFMRNGPAVFCIPSRVFAFLWPLLANFAVLWYMSYVI
IAEKNVVLGVLPYSDGRLDSVVPMRTGGEQKKSQLIRVFAAQDLPCVISN
STSYEQLAAPTNSILEAGGDLMLQMRFLQMTSVGQLRLASSNRLKLRSDR
AKTTGSIDKRNTVRQGFRQTIRDVYRTR*
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