Gvermi8151.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8151.t1
Unique NameGvermi8151.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length437
Homology
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BLAST of Gvermi8151.t1 vs. uniprot
Match: A0A2V3ISW2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISW2_9FLOR)

HSP 1 Score: 352 bits (902), Expect = 1.980e-114
Identity = 202/422 (47.87%), Postives = 276/422 (65.40%), Query Frame = 0 
Query:    1 MIRNGYLTHPDADFGLHNLRLKNPFLHELLIAVSMTCLVYQVTKLLLEISLGQTRRGEIKVSDFHIYTVVSSLSFTSILSPIWDRKHQGADAAKVTNCPTY--FSSTPNHIISVV-KYVLLLMALPGIQILGIFLSIETESSVSFKQASFGGMGMGVSGGRELMKQNTTSDCAKVETFLAMDENAVSDFFRCYNQFL-IPFDNEKHFGKSEKFIVILRASPVDIGVTIVVRGKRWISSLHLDMSDGKKSYRLKNVLTGAQREEIFDRGIQKMIGPCPSHTIQNSVDISWVIPPS----PQQEIISASVECDNFDSDFIAAVANRMLDNVTFVETERLELTENSNYPLKFKNGEDIVFFERRRSTAMLLPTIISVLVVFLVRHLVMLVLYVEGPLAMEMLLKERFGLNSCDSMLQVEQTVHYG 414
            MIR+ YLT+  A     N R ++    EL+ AV +T  VYQ+TKLLLE+SLGQ R+GEI +SD ++Y VVS LSF++++S I        D ++    P+Y   SS       V+ K+VLL++++PGI ILGIFLSIETE+ +SFK  +FGG+ MG+   R  +K N  S C KV T     E   SDFFRCY     IPFDNE +  ++ +FI ILR+S  +IGVTIV  GKRWIS L L+++DGK++Y LKN L+  QR  IF+ G+++++ PC S      +DISWVIPPS    P+Q+I+   VEC  +D   +A V N ML+NV+FV+TER E++E S    +F   +D++FF RR S A LL  +I  ++V L R LV  VL +EGP A+E+++K+RFGL  CDSMLQ EQ V+YG
Sbjct:    1 MIRDEYLTYAGAQSAFRNWRPESDIFFELVFAVLVTVFVYQLTKLLLEVSLGQKRKGEIVISDLYVYMVVSGLSFSAVVSNIRSLFRGKQDDSQEERSPSYGLLSSKSARTARVLAKFVLLVLSIPGIHILGIFLSIETETDLSFKDVNFGGLAMGLREDRSNIKMNRASSCPKVLTRFGHGETGTSDFFRCYTMTPPIPFDNEDNL-QAGRFIAILRSSSNNIGVTIVTPGKRWISFLTLNVNDGKQTYLLKNTLSSDQRSRIFESGVRELVAPCNSSLQTRGIDISWVIPPSLENEPKQDILRVLVECPGYDETHLAQVGNDMLNNVSFVQTERFEVSE-SFVSEEFVPADDLIFFRRRGSNASLLAMLIITVIVILARVLVGFVLSIEGPFALEVIIKDRFGLKCCDSMLQYEQKVNYG 420
The following BLAST results are available for this feature:
BLAST of Gvermi8151.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISW2_9FLOR1.980e-11447.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 383..436
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..63
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 135..358
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 359..382
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 84..111
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
NoneNo IPR availableTMHMMTMhelixcoord: 64..83
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 359..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:1284244..1285554 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8151.t1Gvermi8151.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 1284244..1285554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8151.t1 ID=Gvermi8151.t1|Name=Gvermi8151.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=437bp
MIRNGYLTHPDADFGLHNLRLKNPFLHELLIAVSMTCLVYQVTKLLLEIS
LGQTRRGEIKVSDFHIYTVVSSLSFTSILSPIWDRKHQGADAAKVTNCPT
YFSSTPNHIISVVKYVLLLMALPGIQILGIFLSIETESSVSFKQASFGGM
GMGVSGGRELMKQNTTSDCAKVETFLAMDENAVSDFFRCYNQFLIPFDNE
KHFGKSEKFIVILRASPVDIGVTIVVRGKRWISSLHLDMSDGKKSYRLKN
VLTGAQREEIFDRGIQKMIGPCPSHTIQNSVDISWVIPPSPQQEIISASV
ECDNFDSDFIAAVANRMLDNVTFVETERLELTENSNYPLKFKNGEDIVFF
ERRRSTAMLLPTIISVLVVFLVRHLVMLVLYVEGPLAMEMLLKERFGLNS
CDSMLQVEQTVHYGNIYVSENAAQGETITSDDGDKF*
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