Gvermi8092.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8092.t1
Unique NameGvermi8092.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length181
Homology
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BLAST of Gvermi8092.t1 vs. uniprot
Match: A0A2V3J9A3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J9A3_9FLOR)

HSP 1 Score: 117 bits (293), Expect = 2.940e-30
Identity = 78/172 (45.35%), Postives = 90/172 (52.33%), Query Frame = 0 
Query:    2 SADAAQQLRETLKVALQDARKLYDDGLIDDNEFKDLKDLELTKYRQQLTAIA----------DAPTPAAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRFSNADVLVVDPSTFQRLTTPPIFRXXXXXXXXIIVPSDELNKLRQPSQLDQAES 163
            +ADA QQLRE LKVALQDARKLYDDGL+D+NEFKDLK  EL KY++QL AI             P P+A +P                                            PRF+  DVL VD STFQRLTTPPIFR        I+VPS+EL KL+QP Q D  +S
Sbjct:    3 TADAQQQLREKLKVALQDARKLYDDGLLDENEFKDLKAHELEKYKEQLAAITAPSKPLNSHQTPPPPSATTPTRTPLNVRFRKQALASPASAPSYLSPPSHIR-------------PRFAREDVLYVDSSTFQRLTTPPIFRRRPKKRR-IVVPSEELRKLQQPLQPDGKDS 160
The following BLAST results are available for this feature:
BLAST of Gvermi8092.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J9A3_9FLOR2.940e-3045.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:976915..977457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8092.t1Gvermi8092.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 976915..977457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8092.t1 ID=Gvermi8092.t1|Name=Gvermi8092.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=181bp
MSADAAQQLRETLKVALQDARKLYDDGLIDDNEFKDLKDLELTKYRQQLT
AIADAPTPAAASPPATNCTPLAPLTPTRTPLTARLSQTARQSPASAPSYL
SPPSHIKPRFSNADVLVVDPSTFQRLTTPPIFRRRRSKKRRIIVPSDELN
KLRQPSQLDQAESPARGATTYPLRGGAPLP*
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