Gvermi8086.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8086.t1
Unique NameGvermi8086.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length243
Homology
BLAST of Gvermi8086.t1 vs. uniprot
Match: A0A2V3J516_9FLOR (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J516_9FLOR)

HSP 1 Score: 378 bits (971), Expect = 5.090e-131
Identity = 181/242 (74.79%), Postives = 210/242 (86.78%), Query Frame = 0
Query:    1 MSTEHPSTLPPESLQGRLSAIFFDLDGTCINSDSIHFECYRDTLLDLVPAFNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEHVISRGVSPIAGLKQLLARCSQQDIVSYVVTNAPKGTCAKTMASIGIAEHFGGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRAFGAAFTVSDYNDPKLASALSMWLK 242
            M  +H  T+PPES++G L AI FDLDGTC+NSD IH+ECYRDTLL+L+P+FNGG PITREFYD EMSGRQNP LV++ILPQL L +QTR+W+TKESRYE VIS+GVSPIAGL +L+ RC Q  I++Y+VTNAPKGTC KT++SIGI E+FG  VVVAEEC++PKPHPAPYLRAL+LAGVSA EAIAFEDSPSGT SA  AGLLT+GMRSTQ+DE LR+FGAAFTV DYNDPKL SAL MW K
Sbjct:    1 MPDDHLHTMPPESIEGTLKAILFDLDGTCLNSDHIHYECYRDTLLELIPSFNGGKPITREFYDSEMSGRQNPELVSKILPQLPLHEQTRLWQTKESRYEDVISKGVSPIAGLIELIKRCKQDGIITYIVTNAPKGTCVKTVSSIGITEYFGSHVVVAEECEYPKPHPAPYLRALELAGVSAKEAIAFEDSPSGTRSAIGAGLLTIGMRSTQSDETLRSFGAAFTVRDYNDPKLLSALCMWTK 242          
BLAST of Gvermi8086.t1 vs. uniprot
Match: R7QAB4_CHOCR (HAD-like hydrolase family protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAB4_CHOCR)

HSP 1 Score: 287 bits (734), Expect = 3.990e-95
Identity = 141/224 (62.95%), Postives = 170/224 (75.89%), Query Frame = 0
Query:   18 LSAIFFDLDGTCINSDSIHFECYRDTLLDLVPAFNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEHVISRGVSPIAGLKQLLARCSQQDIVSYVVTNAPKGTCAKTMASIGIAEHFGGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRAFGAAFTVSDYNDPKLASALSMWL 241
            L A+FFDLDGTC+NSD IHF  YRD LL+L P FN G PITR +YD  MSGRQNP LVA +LP + L  +TR+W+ KE+RYE  I+RGV PI+GL  LL+    + + +YVVTNAP+G+C KTMA+IGIAEHFG  V+VAE+C  PKP PAPYL AL+LAGV   +A+ FEDSPSGT SA AAGLLT+G+RSTQTDE LRA GA  T+ DY D  L  AL+ W+
Sbjct:    8 LQALFFDLDGTCVNSDHIHFSTYRDILLELAPTFNSGLPITRTYYDTHMSGRQNPELVASLLPSVPLPIRTRLWQAKEARYEDHITRGVPPISGLPDLLSLARTKHLRTYVVTNAPRGSCHKTMAAIGIAEHFGSHVIVAEDCAAPKPDPAPYLTALKLAGVRPDQAVVFEDSPSGTCSAVAAGLLTIGVRSTQTDETLRAAGATLTIGDYRDAVLHKALAKWV 231          
BLAST of Gvermi8086.t1 vs. uniprot
Match: A0A1X6NWD3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWD3_PORUM)

HSP 1 Score: 187 bits (475), Expect = 3.310e-55
Identity = 106/233 (45.49%), Postives = 138/233 (59.23%), Query Frame = 0
Query:   10 PPESLQG-RLSAIFFDLDGTCINSDSIHFECYRDTLLDLVPAFNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEHVISRGVSPIAGLKQLLARCSQQDIVSYVVTNAPKGTCAKTMASIGIAEHFGGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRAFGAAFTVSDYNDPKLASALSMWL 241
            PP S QG  LSA+ FD+DGT +  D  HFE Y DTLL++ P FNGG  ITREFY+  MSGRQNP L+ +I+P +S E+   +  TKE  Y    +  +  +AG   LL   +   +   VVTNAP+     T+    + + F   V+V +EC   KP P PY+   +   V   EAIAFEDSPSG TSA AAGLLT+G+ +      L A GAAF + DY D +LA+ L +WL
Sbjct:   39 PPISTQGGTLSAVLFDMDGTLVAGDDHHFEAYADTLLEMEPQFNGGKRITREFYNTRMSGRQNPVLLKEIMPDVSPERGVVIADTKERAYMRRTAGAIEALAGAAALLDVLAAAGVRLGVVTNAPREIMEHTLGEAALRDRFPV-VIVGDECARAKPFPDPYVDGCRALDVQPREAIAFEDSPSGITSAVAAGLLTIGVGTGHPPATLLAAGAAFVIHDYYDERLATVLGLWL 270          
BLAST of Gvermi8086.t1 vs. uniprot
Match: A0A835ZE39_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE39_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.930e-54
Identity = 102/241 (42.32%), Postives = 144/241 (59.75%), Query Frame = 0
Query:    2 STEHPSTLPPESLQGRLSAIFFDLDGTCINSDSIHFECYRDTLLDLVPAFNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEHVISRGVSPIAGLKQLLARCSQQD-----IVSYVVTNAPKGTCAKTMASIGIAEHFGGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRAFGAAFTVSDYNDPKLASAL 237
            +TE P+   P  ++G L    FD+DGT ++SD +HFE YRD +L++ P  NGG PI + +Y   MSG  N  + A++ P + L QQ  +W  KE+ Y   IS  ++P+ GL +LL  C  +D     I + +VTNAP+     TM  +GI E FG  VV+  EC   KPHP PYL  L+  G++A + IAFEDS +G  SATAAGL TVG+ +   + ALR  GA   ++D+ D +L + L
Sbjct:   53 ATEAPAQPSPAHIKGCL----FDMDGTLVDSDELHFEAYRDIILEMRPDHNGGKPIDKAWYKEWMSGNSNAVITARLFPDMPLAQQEEMWDRKEALYRR-ISTAMAPLPGLARLLEWCDLEDDDKARIATIIVTNAPRLDARHTMEVLGIHERFGNTVVIGAECARAKPHPEPYLEGLRRLGLAARDCIAFEDSLNGCRSATAAGLFTVGVTTGLDEAALRGAGAGVCIADFTDERLWALL 288          
BLAST of Gvermi8086.t1 vs. uniprot
Match: A0A6H5JCU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU9_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 5.160e-52
Identity = 95/239 (39.75%), Postives = 138/239 (57.74%), Query Frame = 0
Query:    1 MSTEHPSTLPPESLQGRLSAIFFDLDGTCINSDSIHFECYRDTLLDLVPAFNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEHVISRGVSPIAGLKQLLARCSQQDIVSYVVTNAPKGTCAKTMASIGIAEHFGGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRAFGAAFTVSDYNDPKLASALSM 239
            +S E  +T    SL   +  I FD+DGT  +SD++HFE YR+T L + P+FNGG  I+RE+YD  MSG  NP +V ++ P++  E QT +WK KE  Y   IS  ++P+ GL + L  C  + +   +VTNAP+     T+  +G+++ F   +V+  EC   KPHP PYL  L   G+ A   +AFEDS +G +SA +AGL T G+     +      G    VSDY D +L +AL +
Sbjct:   82 VSAESGATNQFPSLPATVKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRK-ISTTMTPLPGLLKFLDCCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEETMVIGYECARAKPHPDPYLEGLSRLGLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLYAALGV 319          
BLAST of Gvermi8086.t1 vs. uniprot
Match: D8LK30_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK30_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.920e-47
Identity = 86/215 (40.00%), Postives = 125/215 (58.14%), Query Frame = 0
Query:   25 LDGTCINSDSIHFECYRDTLLDLVPAFNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEHVISRGVSPIAGLKQLLARCSQQDIVSYVVTNAPKGTCAKTMASIGIAEHFGGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRAFGAAFTVSDYNDPKLASALSM 239
            +DGT  +SD++HFE YR+T L L P+FNGG  I+RE+YD  MSG  NP +V ++ P++  E QT +WK KE  Y   IS  ++ + GL + L  C  + +   +VTNAP+     T+  +G+++ F   +V+  EC   KPHP PYL  L    + A   +AFEDS +G +SA +AGL T G+     +      G    VSDY D +L +AL +
Sbjct:    1 MDGTLTDSDTLHFEAYRETFLKLTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRK-ISTTMTLLPGLLEFLDGCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEETMVIGYECPRAKPHPDPYLEGLSRLDLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLHAALGV 214          
BLAST of Gvermi8086.t1 vs. uniprot
Match: A0A6U0VYW9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VYW9_9STRA)

HSP 1 Score: 168 bits (426), Expect = 8.560e-47
Identity = 96/221 (43.44%), Postives = 127/221 (57.47%), Query Frame = 0
Query:   18 LSAIFFDLDGTCINSDSIHFECYRDTLLDLVPAFNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEHVISRGVSPIAGLKQLLARCSQQDIVSYVVTNAPKGTCAKTMASIGIAEHFGGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRA-FGAAFTVSDYNDPKLASAL 237
            L  I FD+DGT  +SDS+HFE Y+ TL  L P       ITREFYD EMSG+ N  +V ++LP LS EQQ +VW  KE  Y  + S  +    GL   L  C    + + VVTNAP+     T+  +G+   F   VV+  EC   KP P PYL  L+  G+SAS+ IAFEDSPSG  SA AA L TV + S++++E + A  G    V  ++D +L  +L
Sbjct:  160 LRGILFDMDGTLTDSDSVHFEAYKATLARLAPEL---PEITREFYDKEMSGQSNEIIVPKVLPDLSPEQQRQVWVQKEEEYRRLTSDSMQRFEGLDAFLQWCDSNSLKTIVVTNAPREDAMHTLTMLGLFGRFAKHVVIGMECKEAKPSPEPYLEGLRKLGLSASQCIAFEDSPSGAKSAIAAQLRTVAVLSSRSEEEMVATHGCVMGVRRFDDARLLESL 377          
BLAST of Gvermi8086.t1 vs. uniprot
Match: W7TRE2_9STRA (Had family hydrolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRE2_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.390e-44
Identity = 86/226 (38.05%), Postives = 133/226 (58.85%), Query Frame = 0
Query:   13 SLQGRLSAIFFDLDGTCINSDSIHFECYRDTLLDLVPAFNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEHVISRGVSPIAGLKQLLARCSQQDIVSYVVTNAPKGTCAKTMASIGIAEHF-GGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRAFGAAFTVSDYNDPKLASAL 237
            S+   +  I FD+DGT  NSD +HFE YRDTLL   P +N G P+ R FYD ++SG  N  +V  +LP    ++   +W  KE+ Y    S  +SP+ G+ +LL  C++  I   +VTNAP+  C  T+ S+ + + F   ++++ +E   PKP P  Y   L+  G++A E IAFEDS SG  SA AAG+ TV + +++++  +   GA  +V D+++P L + L
Sbjct:   67 SISPHIKGICFDMDGTLTNSDDLHFETYRDTLLKFAPEYNDGRPLERAFYDQKLSGSANEIIVPMLLPHWPQDRMEELWLAKEALYRER-SANISPLPGVIRLLDWCTENKIGYVLVTNAPRVECLHTLHSLKLKDRFHDSKIIIGQEMARPKPFPDAYNEGLRRLGLAAKECIAFEDSFSGLASAVAAGIPTVAVLTSRSEAEMIDRGAFMSVKDFDEPSLWALL 291          
BLAST of Gvermi8086.t1 vs. uniprot
Match: A0A6P0TH84_9CYAN (HAD-IA family hydrolase n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0TH84_9CYAN)

HSP 1 Score: 156 bits (395), Expect = 8.250e-44
Identity = 88/222 (39.64%), Postives = 130/222 (58.56%), Query Frame = 0
Query:   16 GRLSAIFFDLDGTCINSDSIHFECYRDTLLDLVPAFNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEHVISRGVSPIAGLKQLLARCSQQDIVSYVVTNAPKGTCAKTMASIGIAEHFGGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRAFGAAFTVSDYNDPKLASAL 237
            G   AI FDLDGT  N+D++HF+ +R+ LL      N    I REFYD + SGR N  ++ +ILPQLS+E    +   KE+ + +  S  + P+ GL   L      ++   VVTNAP+      + ++ +   F   V++ EE +  KPHP PYL AL+  GV+A++AI FEDSP+G T+   AG+ TVG+ STQ  ++L+A GA   + D+ DP + + L
Sbjct:   18 GPPEAILFDLDGTLTNTDALHFQIWREFLL------NYDLDIDREFYDQKFSGRLNQDILVEILPQLSMEAAIALGVEKEAEFRNRASGSLVPLPGLLSTLDWIESHNLKKAVVTNAPRQNALFMLQTLKVDHRFS-LVIIGEEVEFAKPHPLPYLTALEKLGVAAAKAIVFEDSPTGITAGVKAGIFTVGVASTQEPDSLKALGANVVIEDFTDPIVMALL 232          
BLAST of Gvermi8086.t1 vs. uniprot
Match: A0A7C3KDH7_9CYAN (HAD family hydrolase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3KDH7_9CYAN)

HSP 1 Score: 156 bits (394), Expect = 1.070e-43
Identity = 97/236 (41.10%), Postives = 134/236 (56.78%), Query Frame = 0
Query:    5 HPSTLP-PESLQGRLSAIFFDLDGTCINSDSIHFECYRDTLLDLVPAFNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEHVISRGVSPIAGLKQLLARCSQQDIVSYVVTNAPKGTCAKTMASIGIAEHFGGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRAFGAAFTVSDYNDPKLASALSM 239
            HPS++P   S +  LSAI +DLDGT +N+D IHF  +++ L D       G  I   FY   +SGR NP +VA +LPQLS  +     + KE+R+ H ++  +  + GL QLL     + +   VVTNAP      T+ S+ + E F   VV+A+E    KP PAPY  AL+   + A +AIAFEDSPSG  SAT AG+ T+G+ ST   + L   GA   + D+N P L   LS+
Sbjct:    4 HPSSIPFGSSPKIALSAILYDLDGTLVNTDPIHFRAWQEKLNDF------GMTIDEAFYQKHISGRLNPAIVADLLPQLSETEANSFIEEKEARFRH-LAPNLERMTGLTQLLEWARDRQLHQAVVTNAPTENVHHTLQSLELQEWFQP-VVIADELGIGKPDPAPYCFALEQLKLKADQAIAFEDSPSGIRSATRAGIFTIGVASTHAPQVLTEVGAQLVIDDFNAPALWELLSL 231          
The following BLAST results are available for this feature:
BLAST of Gvermi8086.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J516_9FLOR5.090e-13174.79Haloacid dehalogenase-like hydrolase domain-contai... [more]
R7QAB4_CHOCR3.990e-9562.95HAD-like hydrolase family protein n=1 Tax=Chondrus... [more]
A0A1X6NWD3_PORUM3.310e-5545.49Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A835ZE39_9STRA3.930e-5442.32HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A6H5JCU9_9PHAE5.160e-5239.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK30_ECTSI1.920e-4740.00Haloacid dehalogenase-like hydrolase family protei... [more]
A0A6U0VYW9_9STRA8.560e-4743.44Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TRE2_9STRA1.390e-4438.05Had family hydrolase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A6P0TH84_9CYAN8.250e-4439.64HAD-IA family hydrolase n=1 Tax=Cyanothece sp. SIO... [more]
A0A7C3KDH7_9CYAN1.070e-4341.10HAD family hydrolase n=1 Tax=Oscillatoriales cyano... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041492Haloacid dehalogenase-like hydrolasePFAMPF13419HAD_2coord: 21..205
e-value: 6.3E-23
score: 81.8
IPR006439HAD hydrolase, subfamily IATIGRFAMTIGR01509TIGR01509coord: 86..207
e-value: 2.1E-14
score: 51.9
IPR023198Phosphoglycolate phosphatase-like, domain 2GENE3D1.10.150.240Putative phosphatase; domain 2coord: 33..105
e-value: 1.3E-39
score: 138.2
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 20..222
e-value: 1.3E-39
score: 138.2
NoneNo IPR availableSFLDSFLDG01129C1.5:_HAD,_Beta-PGM,_Phosphatcoord: 19..228
e-value: 2.6E-26
score: 87.4
NoneNo IPR availableSFLDSFLDS00003Haloacid_Dehalogenasecoord: 19..228
e-value: 2.6E-26
score: 87.4
NoneNo IPR availablePANTHERPTHR461936-PHOSPHOGLUCONATE PHOSPHATASEcoord: 17..237
NoneNo IPR availablePANTHERPTHR46193:SF18HEXITOL PHOSPHATASE Bcoord: 17..237
NoneNo IPR availableCDDcd07505HAD_BPGM-likecoord: 20..209
e-value: 1.11556E-27
score: 101.153
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 18..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:958011..958824 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8086.t1Gvermi8086.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 958011..958824 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8086.t1 ID=Gvermi8086.t1|Name=Gvermi8086.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=243bp
MSTEHPSTLPPESLQGRLSAIFFDLDGTCINSDSIHFECYRDTLLDLVPA
FNGGSPITREFYDLEMSGRQNPHLVAQILPQLSLEQQTRVWKTKESRYEH
VISRGVSPIAGLKQLLARCSQQDIVSYVVTNAPKGTCAKTMASIGIAEHF
GGRVVVAEECDHPKPHPAPYLRALQLAGVSASEAIAFEDSPSGTTSATAA
GLLTVGMRSTQTDEALRAFGAAFTVSDYNDPKLASALSMWLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041492HAD_2
IPR006439HAD-SF_hydro_IA
IPR023198PGP-like_dom2
IPR023214HAD_sf
IPR036412HAD-like_sf