Gvermi8085.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi8085.t1 vs. uniprot
Match: R7QCG2_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCG2_CHOCR) HSP 1 Score: 168 bits (426), Expect = 1.950e-50 Identity = 82/169 (48.52%), Postives = 116/169 (68.64%), Query Frame = 0
Query: 1 MELYFQEHDI--SGEDSERRSTSRPSIVLRFASSLATLYSTNEDGDEERLREQVRAILAELAEGDPSVSGTPPASEEAIRTLPYVNVEKNQKGQLSSCPICTDQFELHEVARRLPCGHLFHSDCVTPWLKQHCTCPMCRRELPTDNREYEEEKKRQRRQAAVSSMQSFM 167
M+LY+QEHD+ + D+ TS +++LR A +A + S + ERL V +LA++++ DPS+ G PPAS E+IRTLP VN+ G SSCPICT+++E +E A+RLPCGH FH+DCV PWL+ HCTCP+CR ELPTD+ Y + K+ ++R+ AVS +Q M
Sbjct: 1 MDLYYQEHDVRPNERDTASTQTSTSTVMLRLALLVARM-SEATGPEHERLAAAVDHLLAQVSDTDPSMPGKPPASAESIRTLPVVNMRPGPSGP-SSCPICTEEYEFNEPAKRLPCGHTFHADCVVPWLRSHCTCPLCRAELPTDDLAYMQRKRLEKRREAVSQLQHHM 167
BLAST of Gvermi8085.t1 vs. uniprot
Match: UPI001E1DB7B7 (E3 ubiquitin-protein ligase RNF181-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB7B7) HSP 1 Score: 150 bits (379), Expect = 3.410e-43 Identity = 77/178 (43.26%), Postives = 112/178 (62.92%), Query Frame = 0
Query: 1 MELYFQEHDISGEDSERRSTSRPS----IVLRFASSLATLYSTN--EDGDEERLREQVRAILAELAEGDPSVSGTPPASEEAIRTLPYVNV---EKNQKGQLSSCPICTDQFELHEVARRLPCGHLFHSDCVTPWLKQHCTCPMCRRELPTDNREYEEEKKRQRRQAAVSSMQSFMYS 169
M+LYF EH + + R + L+ A+ LA L T ED + +RL R++LA + + DPS+ GTPPAS++AI L V++ + L SC +CT+ FE +E AR+LPCGH+FH DCV PWL+QHC+CPMCR E+P+ + YE+ K ++RQ+AV S++S MY+
Sbjct: 1 MDLYFAEHGVVPGSTSRGGAAELGEGALATLQAAAVLAQLTETAGVEDSETQRLGAVARSLLASVLDQDPSLQGTPPASDDAIAALERVHIVPRAASADADLLSCAVCTEYFERNEPARKLPCGHVFHGDCVIPWLRQHCSCPMCRHEIPSSDPVYEQGKVHRQRQSAVDSLRSSMYN 178
BLAST of Gvermi8085.t1 vs. uniprot
Match: A0A830C0W6_9LAMI (RING-type E3 ubiquitin transferase n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830C0W6_9LAMI) HSP 1 Score: 115 bits (289), Expect = 1.690e-28 Identity = 46/95 (48.42%), Postives = 71/95 (74.74%), Query Frame = 0
Query: 55 ILAELAEGDPSVSGTPPASEEAIRTLPYVNVEKN-QKGQLSSCPICTDQFELHEVARRLPCGHLFHSDCVTPWLKQHCTCPMCRRELPTDNREYE 148
++ +LAE DP+ GTPPAS+ A+ LP +NV+++ K +L+ C +C D FEL V +++PC H++H+DC+ PWL+ H +CP+CR ELPTD+ +YE
Sbjct: 136 LIQQLAENDPNRYGTPPASKSAVEALPSINVDEDLMKSELAQCAVCKDDFELGTVVKQMPCKHVYHTDCILPWLELHNSCPVCRHELPTDDPDYE 230
BLAST of Gvermi8085.t1 vs. uniprot
Match: D8T3I3_SELML (RING-type domain-containing protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T3I3_SELML) HSP 1 Score: 110 bits (275), Expect = 1.780e-28 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 0
Query: 55 ILAELAEGDPSVSGTPPASEEAIRTLPYVNV-EKNQKGQLSSCPICTDQFELHEVARRLPCGHLFHSDCVTPWLKQHCTCPMCRRELPTDNREY 147
++ +LAE DP+ GTPPAS+ AI +P V++ ++ G C +C D+FEL R++PC HL+H DC+ PWL QH +CP+CR E+PTD+ EY
Sbjct: 3 LIQQLAENDPNRYGTPPASKTAIEAMPVVSITSEHMSGDGGQCAVCKDEFELGSEVRQMPCKHLYHGDCILPWLAQHNSCPVCRHEMPTDDPEY 96
BLAST of Gvermi8085.t1 vs. uniprot
Match: A0A5C7H6G6_9ROSI (RING-type E3 ubiquitin transferase n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7H6G6_9ROSI) HSP 1 Score: 115 bits (289), Expect = 4.750e-28 Identity = 48/96 (50.00%), Postives = 69/96 (71.88%), Query Frame = 0
Query: 55 ILAELAEGDPSVSGTPPASEEAIRTLPYVNV-EKNQKGQLSSCPICTDQFELHEVARRLPCGHLFHSDCVTPWLKQHCTCPMCRRELPTDNREYEE 149
++ +LAE DP+ GTPPAS+ A+ LP + + E+ S C +C D FEL+E AR++PC H++HSDC+ PWL+ H +CP+CR ELPTD+ EYE+
Sbjct: 147 LIQQLAENDPNRYGTPPASKSAVEGLPNIKITEQMMSSDSSQCAVCKDSFELNEEARQMPCKHIYHSDCILPWLEMHNSCPVCRYELPTDDAEYEQ 242
BLAST of Gvermi8085.t1 vs. uniprot
Match: A0A7J9EI15_9ROSI (RING-type domain-containing protein n=1 Tax=Gossypium trilobum TaxID=34281 RepID=A0A7J9EI15_9ROSI) HSP 1 Score: 112 bits (279), Expect = 6.180e-28 Identity = 47/95 (49.47%), Postives = 68/95 (71.58%), Query Frame = 0
Query: 55 ILAELAEGDPSVSGTPPASEEAIRTLPYVNVEK-NQKGQLSSCPICTDQFELHEVARRLPCGHLFHSDCVTPWLKQHCTCPMCRRELPTDNREYE 148
++ +LAE DP+ GTPPAS+ A+ TLP VN+ K N + + C +C D+FE A+++PC HL+H DC+ PWL+ H +CP+CR ELPTD+ +YE
Sbjct: 32 LIQQLAENDPNRYGTPPASKSAMDTLPSVNISKHNLSSEFNQCAVCMDEFEDGTEAKQMPCKHLYHKDCIFPWLELHNSCPVCRHELPTDDPDYE 126
BLAST of Gvermi8085.t1 vs. uniprot
Match: UPI000CD93744 (E3 ubiquitin-protein ligase RING1 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD93744) HSP 1 Score: 115 bits (289), Expect = 7.290e-28 Identity = 53/137 (38.69%), Postives = 80/137 (58.39%), Query Frame = 0
Query: 24 SIVLRFASSLATLYSTNEDGDEERLR-----------EQVRAILAELAEGDPSVSGTPPASEEAIRTLPYVNVEKNQ-KGQLSSCPICTDQFELHEVARRLPCGHLFHSDCVTPWLKQHCTCPMCRRELPTDNREYE 148
S + +++ + N DGD R + ++ +LAE DP+ GTPPAS+ I+ LP + + + + S C +C D FELHE A++LPC H++H DC+ PWL+ H +CP+CR ELPTD++EYE
Sbjct: 144 STLRAGGANIQFVIENNSDGDPSGFRLPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSVIQNLPNIKITSDLLESDYSDCAVCKDSFELHEQAKQLPCKHVYHQDCIVPWLELHNSCPVCRYELPTDDQEYE 280
BLAST of Gvermi8085.t1 vs. uniprot
Match: A0A2J6KV11_LACSA (RING-type E3 ubiquitin transferase n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KV11_LACSA) HSP 1 Score: 115 bits (289), Expect = 8.360e-28 Identity = 53/137 (38.69%), Postives = 80/137 (58.39%), Query Frame = 0
Query: 24 SIVLRFASSLATLYSTNEDGDEERLR-----------EQVRAILAELAEGDPSVSGTPPASEEAIRTLPYVNVEKNQ-KGQLSSCPICTDQFELHEVARRLPCGHLFHSDCVTPWLKQHCTCPMCRRELPTDNREYE 148
S + +++ + N DGD R + ++ +LAE DP+ GTPPAS+ I+ LP + + + + S C +C D FELHE A++LPC H++H DC+ PWL+ H +CP+CR ELPTD++EYE
Sbjct: 144 STLRAGGANIQFVIENNSDGDPSGFRLPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSVIQNLPNIKITSDLLESDYSDCAVCKDSFELHEQAKQLPCKHVYHQDCIVPWLELHNSCPVCRYELPTDDQEYE 280
BLAST of Gvermi8085.t1 vs. uniprot
Match: A0A2P6P1I4_ROSCH (RING-type E3 ubiquitin transferase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P1I4_ROSCH) HSP 1 Score: 115 bits (288), Expect = 1.190e-27 Identity = 51/96 (53.12%), Postives = 68/96 (70.83%), Query Frame = 0
Query: 55 ILAELAEGDPSVSGTPPASEEAIRTLPYVNVEKNQKGQLSS-CPICTDQFELHEVARRLPCGHLFHSDCVTPWLKQHCTCPMCRRELPTDNREYEE 149
++ +LAE DP+ GTPPAS+ AI LP V + K SS C +C D FEL E A+++PC HL+HSDC+ PWL+ H +CP+CR ELPTD+ EYE+
Sbjct: 182 LIQQLAENDPNRYGTPPASKSAIEALPVVKISKELLDSDSSQCAVCKDSFELGEEAKQMPCKHLYHSDCILPWLELHNSCPVCRHELPTDDSEYEQ 277
BLAST of Gvermi8085.t1 vs. uniprot
Match: UPI000D62D084 (E3 ubiquitin-protein ligase RING1-like isoform X2 n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62D084) HSP 1 Score: 113 bits (283), Expect = 3.340e-27 Identity = 47/95 (49.47%), Postives = 67/95 (70.53%), Query Frame = 0
Query: 55 ILAELAEGDPSVSGTPPASEEAIRTLPYVNVEKNQ-KGQLSSCPICTDQFELHEVARRLPCGHLFHSDCVTPWLKQHCTCPMCRRELPTDNREYE 148
++ +LAE DP+ GTPPAS+ +R LP + + + + S C +C D FELHE A++LPC H++H DC+ PWL+ H +CP+CR ELPTD+ EYE
Sbjct: 152 LIQQLAENDPNRYGTPPASKSVVRNLPSIKITDDLLESDYSDCAVCKDSFELHEEAKQLPCKHVYHQDCIIPWLELHNSCPVCRFELPTDDPEYE 246 The following BLAST results are available for this feature:
BLAST of Gvermi8085.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi8085.t1 ID=Gvermi8085.t1|Name=Gvermi8085.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=170bpback to top |