Gvermi8081.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8081.t1
Unique NameGvermi8081.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length117
Homology
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BLAST of Gvermi8081.t1 vs. uniprot
Match: A0A2V3J524_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J524_9FLOR)

HSP 1 Score: 115 bits (289), Expect = 2.990e-31
Identity = 76/120 (63.33%), Postives = 85/120 (70.83%), Query Frame = 0 
Query:    1 MSTPTTTHHDTPIINSPSKSPTLPPRAAPIQASTCPLPHSPKPHLXXXXXXPLSPLRLPDKHQSRTALERPRAQNEVPAVPPPAPVAFD-----EPPHFVPQGAEEDIMEVLMERAKRHS 115
            MS+PTTTHHDT +INSPSKSP LPPRA P+   TCPLPHSPKPHLXXXXXX    LRLP+KH  R    +P  QN      PP P   D     EPP F+P+GAEEDIME L+E+AKRHS
Sbjct:    1 MSSPTTTHHDTIVINSPSKSPALPPRAPPVSGKTCPLPHSPKPHLXXXXXXXXXALRLPEKHPLRP---QPDPQNL-----PPLPNTTDSDDNNEPP-FIPEGAEEDIMENLLEQAKRHS 111
The following BLAST results are available for this feature:
BLAST of Gvermi8081.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J524_9FLOR2.990e-3163.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:951947..952297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8081.t1Gvermi8081.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 951947..952297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8081.t1 ID=Gvermi8081.t1|Name=Gvermi8081.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=117bp
MSTPTTTHHDTPIINSPSKSPTLPPRAAPIQASTCPLPHSPKPHLPHQPL
PPLSPLRLPDKHQSRTALERPRAQNEVPAVPPPAPVAFDEPPHFVPQGAE
EDIMEVLMERAKRHSF*
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