Gvermi8041.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi8041.t1
Unique Name	Gvermi8041.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	145

Homology

[Close]

BLAST of Gvermi8041.t1 vs. uniprot
Match: A0A2V3IHK6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHK6_9FLOR)

HSP 1 Score: 94.7 bits (234), Expect = 4.350e-22
Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 0

Query:    1 MFRACKPSVPRTSIDNLH----SPPCPPAATVPPAAEPLQYFGTPSKKHTSPPAPQQLKE----------KPLPTPASPT-IDDQPPTCPPNSGAHPGTDDDGLEMGWEFRTVMEPVLTPDEMSEDLSRDVRPERRIDPHDDPLLNDMFAFFSGLQSEQ 144
            MFRACKPS+PR S D  H    + P PPAA V PAAEP   F TP+K  +   A  Q ++          +PL  P  P+ +  QP  C              LE GWE++TV +P LT +++ EDL+R+VRPER+I P +DPLL+ MF+ F    +E+
Sbjct:    1 MFRACKPSLPRASPDKTHPHRTAAPDPPAA-VQPAAEPPYVFRTPTKDDSGDTAESQNQKSHAQSFAREPQPLTMPPPPSEVCSQPYICT-------------LEPGWEYKTVRQPALTQEDVLEDLTREVRPERQISPDNDPLLDLMFSMFPEPTAEE 145

The following BLAST results are available for this feature:

BLAST of Gvermi8041.t1 vs. uniprot

BLAST of Gvermi8041.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IHK6_9FLOR	4.350e-22	41.51	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..78

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:787788..788222 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi8041.t1	Gvermi8041.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 787788..788222 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi8041.t1 ID=Gvermi8041.t1|Name=Gvermi8041.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=145bp
MFRACKPSVPRTSIDNLHSPPCPPAATVPPAAEPLQYFGTPSKKHTSPPA
PQQLKEKPLPTPASPTIDDQPPTCPPNSGAHPGTDDDGLEMGWEFRTVME
PVLTPDEMSEDLSRDVRPERRIDPHDDPLLNDMFAFFSGLQSEQ*