Gvermi8038.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8038.t1
Unique NameGvermi8038.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length113
Homology
BLAST of Gvermi8038.t1 vs. uniprot
Match: R7QMX8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMX8_CHOCR)

HSP 1 Score: 169 bits (428), Expect = 1.980e-51
Identity = 85/111 (76.58%), Postives = 96/111 (86.49%), Query Frame = 0
Query:    5 NSTVLRARAKWQ---SIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVTNPTAKVSVEETE 112
            + T +R    W+    IDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGF+KF+VHNVNELE+LMMQNRVYCAEIA +VS RKRIAI+DRAAQLDIK++N  A+V VEETE
Sbjct:   79 SDTQMRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFFKFLVHNVNELEVLMMQNRVYCAEIAHSVSCRKRIAIIDRAAQLDIKISNAGARVKVEETE 189          
BLAST of Gvermi8038.t1 vs. uniprot
Match: A0A2V3IHN5_9FLOR (60S ribosomal protein L32-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHN5_9FLOR)

HSP 1 Score: 167 bits (423), Expect = 8.620e-51
Identity = 85/109 (77.98%), Postives = 94/109 (86.24%), Query Frame = 0
Query:    7 TVLRARAKWQ---SIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVTNPTAKVSVEETE 112
            T +R    W+    IDSRVRRKWRGKVSMPNIGYG+NKKTRHMLPNGF+KFVVHNV+ELE+LMM NRV+CAEI  AVSARKRIAILDRAAQLDI+VTN  A+V VEETE
Sbjct:   72 TKIRVAESWRRPKGIDSRVRRKWRGKVSMPNIGYGTNKKTRHMLPNGFFKFVVHNVSELEVLMMHNRVFCAEIGHAVSARKRIAILDRAAQLDIRVTNSNARVKVEETE 180          
BLAST of Gvermi8038.t1 vs. uniprot
Match: Q7XY96_GRIJA (Ribosome protein L32 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY96_GRIJA)

HSP 1 Score: 155 bits (391), Expect = 1.470e-46
Identity = 77/111 (69.37%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    5 NSTVLRARAKWQ---SIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVTNPTAKVSVEETE 112
            + T +R    W+    IDSRVRRKWRGKV MPNIGYGSNKKTRH+LPNGFYK ++ NV+EL++LMM NR YC EIA +VS+RKRIAILDRAAQ D+KVTN  AKV VEET+
Sbjct:   23 SDTAIRVSESWRRPKGIDSRVRRKWRGKVLMPNIGYGSNKKTRHLLPNGFYKMLISNVDELDVLMMHNRTYCVEIAHSVSSRKRIAILDRAAQFDLKVTNAGAKVKVEETQ 133          
BLAST of Gvermi8038.t1 vs. uniprot
Match: A0A6T6MH63_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6MH63_9RHOD)

HSP 1 Score: 139 bits (349), Expect = 3.620e-40
Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 0
Query:    9 LRARAKWQ---SIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVTNPTAKVSVEETE 112
            LR +  W+    IDS VRRK+RGKV MPNIGYGSNKKTRH++PNGFYKFVV+NV EL+LL+M NR Y AEIA  VS++KR  I+ RAA+LD+KVTN  A+V VEETE
Sbjct:   27 LRVKESWRRPKGIDSCVRRKFRGKVLMPNIGYGSNKKTRHLMPNGFYKFVVNNVKELDLLLMHNRTYAAEIAHNVSSKKRKEIIARAAELDVKVTNSKARVRVEETE 133          
BLAST of Gvermi8038.t1 vs. uniprot
Match: A0A4P9XXJ7_9FUNG (60S ribosomal protein L32 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XXJ7_9FUNG)

HSP 1 Score: 135 bits (340), Expect = 8.720e-39
Identity = 69/105 (65.71%), Postives = 86/105 (81.90%), Query Frame = 0
Query:    9 LRARAKWQS---IDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVTNPTAKVSVEE 110
            LR  A W+    ID+RVRR+++G+++MPNIGYGSNKKTRH++PNGF KF+V NV EL+LLMMQNR Y AEIA  VS+RKRI I++RAAQL+IKVTN  A+V  EE
Sbjct:   29 LRVDASWRKPKGIDNRVRRRFKGQIAMPNIGYGSNKKTRHLMPNGFKKFLVSNVKELDLLMMQNRTYAAEIAHNVSSRKRIQIVERAAQLNIKVTNAKARVRTEE 133          
BLAST of Gvermi8038.t1 vs. uniprot
Match: M4C135_HYAAE (Uncharacterized protein n=11 Tax=Oomycota TaxID=4762 RepID=M4C135_HYAAE)

HSP 1 Score: 135 bits (341), Expect = 1.380e-38
Identity = 65/97 (67.01%), Postives = 80/97 (82.47%), Query Frame = 0
Query:   16 QSIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVTNPTAKVSVEETE 112
            + ID RVRRK++G + MPN+GYGSNKKTRH+LPNGFYKFVV+NV ELE+L+M NR YCAEIA  VS RKR  I++RA QL+++VTNP A+V  EE E
Sbjct:   39 KGIDGRVRRKFKGAIKMPNVGYGSNKKTRHLLPNGFYKFVVNNVAELEVLLMHNRKYCAEIAHNVSGRKRREIIERAEQLNVRVTNPDARVRAEENE 135          
BLAST of Gvermi8038.t1 vs. uniprot
Match: V4KPF8_EUTSA (Uncharacterized protein n=3 Tax=Brassicaceae TaxID=3700 RepID=V4KPF8_EUTSA)

HSP 1 Score: 133 bits (335), Expect = 4.870e-38
Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 0
Query:    3 DPNSTVLRARAKWQSIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVTNPTAKVSVEETE 112
            D   TV  +  + + IDSRVRRK++G   MPN+GYGS+KKTRH LPNGF KFVVHNV ELELLMM NR YCAEIA  +S +KR AI++RA+QLD+ VTN TA++  +E E
Sbjct:   24 DRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNVTELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVAVTNKTARLRSQEDE 133          
BLAST of Gvermi8038.t1 vs. uniprot
Match: A0A023EEF4_AEDAL (60S ribosomal protein L32 n=7 Tax=Culicoidea TaxID=41827 RepID=A0A023EEF4_AEDAL)

HSP 1 Score: 133 bits (335), Expect = 5.020e-38
Identity = 66/99 (66.67%), Postives = 82/99 (82.83%), Query Frame = 0
Query:   14 KWQSIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVTNPTAKVSVEETE 112
            K + ID+RVRR+++G+  MPNIGYGSNK+TRHMLPNGF KF+VHNV ELE+LMMQNRVYCAEIA AVS++KR  I++RA QL I VTNP  ++  +E E
Sbjct:   36 KPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPNGFKKFLVHNVRELEVLMMQNRVYCAEIAHAVSSKKRKQIVERAKQLAIAVTNPNGRLRSQENE 134          
BLAST of Gvermi8038.t1 vs. uniprot
Match: A0A6A4Q9D3_LUPAL (Putative ribosomal protein L32e n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4Q9D3_LUPAL)

HSP 1 Score: 132 bits (333), Expect = 5.700e-38
Identity = 67/97 (69.07%), Postives = 79/97 (81.44%), Query Frame = 0
Query:   16 QSIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVTNPTAKVSVEETE 112
            + IDSRVRRK++G V MPNIGYGS+KKTRH LPNGF KFVVHNV +LELLMM NR YCAEIA  +S RKR  I++RAAQLD+ VTN TA++  +E E
Sbjct:   19 KGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNISTRKRKEIVERAAQLDVVVTNKTARLRSQEDE 115          
BLAST of Gvermi8038.t1 vs. uniprot
Match: A0A7S2XAB1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XAB1_9EUKA)

HSP 1 Score: 132 bits (333), Expect = 6.630e-38
Identity = 65/95 (68.42%), Postives = 79/95 (83.16%), Query Frame = 0
Query:   16 QSIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVTNPTAKVSVEE 110
            + IDSRVRRK++G + M N+GYGSNKKTR++LPNGFYKF+VHNV ELELLMM NR YCAE+A AVS++KR  I++RA QL IKVTN  AK+  EE
Sbjct:   24 KGIDSRVRRKFKGAIPMANVGYGSNKKTRNLLPNGFYKFLVHNVKELELLMMHNRKYCAEVAHAVSSKKRKEIVERADQLGIKVTNANAKLRAEE 118          
The following BLAST results are available for this feature:
BLAST of Gvermi8038.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QMX8_CHOCR1.980e-5176.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IHN5_9FLOR8.620e-5177.9860S ribosomal protein L32-1 n=1 Tax=Gracilariopsis... [more]
Q7XY96_GRIJA1.470e-4669.37Ribosome protein L32 n=1 Tax=Griffithsia japonica ... [more]
A0A6T6MH63_9RHOD3.620e-4067.29Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A4P9XXJ7_9FUNG8.720e-3965.7160S ribosomal protein L32 n=1 Tax=Thamnocephalis s... [more]
M4C135_HYAAE1.380e-3867.01Uncharacterized protein n=11 Tax=Oomycota TaxID=47... [more]
V4KPF8_EUTSA4.870e-3861.82Uncharacterized protein n=3 Tax=Brassicaceae TaxID... [more]
A0A023EEF4_AEDAL5.020e-3866.6760S ribosomal protein L32 n=7 Tax=Culicoidea TaxID... [more]
A0A6A4Q9D3_LUPAL5.700e-3869.07Putative ribosomal protein L32e n=1 Tax=Lupinus al... [more]
A0A7S2XAB1_9EUKA6.630e-3868.42Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 10..101
e-value: 3.7E-48
score: 176.0
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 14..101
e-value: 9.3E-38
score: 128.9
IPR001515Ribosomal protein L32ePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 13..111
IPR001515Ribosomal protein L32eCDDcd00513Ribosomal_L32_L32ecoord: 10..101
e-value: 9.92714E-51
score: 153.84
IPR036351Ribosomal protein L32e superfamilySUPERFAMILY52042Ribosomal protein L32ecoord: 11..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:777520..778190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8038.t1Gvermi8038.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 777520..778190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8038.t1 ID=Gvermi8038.t1|Name=Gvermi8038.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=113bp
LLDPNSTVLRARAKWQSIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNG
FYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIKVT
NPTAKVSVEETE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001515Ribosomal_L32e
IPR036351Ribosomal_L32e_sf