Gvermi8035.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8035.t1
Unique NameGvermi8035.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length486
Homology
BLAST of Gvermi8035.t1 vs. uniprot
Match: A0A2V3IHG6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG6_9FLOR)

HSP 1 Score: 587 bits (1513), Expect = 8.290e-205
Identity = 309/494 (62.55%), Postives = 374/494 (75.71%), Query Frame = 0
Query:    1 MAPPRKRPRIQPVSAKRPPAPPRQSRSRPSLHDDASRPRTLVDLLRPNASRAEQVLGDDAPNDAWSVLANTVDNLPSHATQHPP-VHDSHPDAAVDLHQTQHQQLPVDLSIKTSLNITSSKSLWWTRVRGQAEEYEALHDLLSGVDTLAAANVVRPPLGSDAVVEAQVLTDTLTSAKRQFYRALLHFRYPCTTLPPVISRRWQTVFASSARTRPDSALQEAANVAMERLHLWQSALQSLFFGYKRGHIDHFYILLPSTTLLFSHAAAHS-------ATSVPKRPAHVPSPSDSPLRACFANGSLGLRSLLSDYAVPFRLLHPPNASEAHSEPPVIAEGRVAVQAVYNFVMSVGHKISNAADVPVLLCDKPFRGGTAITANVTDADEANVINSAGGATKLTYSVKINGFLTPRQVRAVCKALVDTQDRDFSVQMITEARSQMLNVCDQSISLLSADGPTSSQQTTSCPIQGR-VLSRVTRQTASPNFVLFTRAIE 485
            M+PPRKRPR QP+SAKRPP PPRQ+RSRP+  D+ SRPRTLVDLL  ++SRAEQVLGD+AP+DAWSVLANT+DNLPS + Q+    H   P +A DL +  ++ LP+DLSIKT++ + SS+SL WT +RGQAEEYEAL DLLS VD L  A   +PPLG+DAV  +   ++    AKR FYRALLHFRYPCTTLPPVISRRWQ+VF  ++R  PDSALQEA +VAMERL LWQSALQSLFFGYKRGHIDHFY++LPST LLFSHA  H+         S  +R  H  S ++  LRACFA GS GLRSLLSDYAVPF++ H  + +   ++P V+AEG +AVQAVYNF ++VGHKISNA DVP+LLCDKPFRGGTA++A VTD DE NVI+S GG T+L YSVK+NG LTPRQ+ A+CKA V TQD D+SVQ+ TE RS+MLNV +  I  L+     +S Q  S  +QGR VLSR+     S NF L+TRA+E
Sbjct:   46 MSPPRKRPRTQPISAKRPPPPPRQTRSRPAPQDENSRPRTLVDLLGRSSSRAEQVLGDNAPSDAWSVLANTLDNLPSESRQNSTHSHQPAPPSAPDLQEPSNEHLPLDLSIKTAITVISSRSLAWTTIRGQAEEYEALRDLLSDVDALVDAEPTKPPLGTDAVAHSHPPSEPFIRAKRLFYRALLHFRYPCTTLPPVISRRWQSVFNPTSRATPDSALQEATHVAMERLRLWQSALQSLFFGYKRGHIDHFYVILPSTALLFSHAVVHNQPRPVRNGRSHHRRGTHSHSTTELTLRACFAKGSPGLRSLLSDYAVPFKIEHGSDRTGGETDPCVVAEGVLAVQAVYNFALAVGHKISNATDVPILLCDKPFRGGTAMSAQVTDVDETNVIDSHGGPTRLRYSVKVNGLLTPRQLTAICKAFVATQDHDYSVQLKTEPRSEMLNVSEHLIGQLNNIASGNSYQPPSTRVQGRRVLSRIVAAAGSRNFSLYTRAVE 539          
BLAST of Gvermi8035.t1 vs. uniprot
Match: R7QQV4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQV4_CHOCR)

HSP 1 Score: 249 bits (635), Expect = 6.100e-73
Identity = 167/476 (35.08%), Postives = 256/476 (53.78%), Query Frame = 0
Query:    2 APPRKRPRIQ--PVSAKRPPAPPRQSRSR--------PSLHD--DASRPRTLVDLLRPNASRAEQVLGDDAPNDAWSVLANTVDNLPSHATQHPPVHDSHPDAAV----------------DLHQTQHQQLPVDLSIKTSLNITSSKSLWWTRVRGQAEEYEALHDLLSGVDTLAAANVVRPPLGSDA--------VVEAQVLTDT-LTSAKRQFYRALLHFRYPCTTLPPVISRRWQTVFASSARTR-PDSALQEAANVAMERLHLWQSALQSLFFGYKRGHIDHFYILLPSTTLLFSHAAAHSATSVPKRPAHVPSPSDSPLRACF----ANGSLGLRSLLSDYAVPFRLLHPPNASEAHSEPPVIAEGRVAVQAVYNFVMSVGHKISNAADVPVLLCDKPFRGGTAITANVTDADEANVINSAGGATKLTYSVKINGFLTPRQVRAVCKALVDTQDRDFSVQMITEARSQMLN 435
            +P RKRPR Q      KRPP   R S  R         S+ D  +A+ P TL DL+    SRAEQ LG++APN+ W+   NT+DN+ S +     + +      V                ++ + +  Q+P+DL++K  +++ S  +L W   RGQ +EY AL  L +G  + A      P   +D         V++A+   D  + + K+  Y+ALLHFR P  +LP VIS RWQ + ++  R    + AL +    A+ RL  WQSA QSL+FGY+ GHI  FY+LL +TT+LF+     + +   +R   + S ++    +CF    A  S GLR+L+S++ VPF L+  P++ E   +P V+ EG  A+ A++NF++S G  ISNA DVP+L+CDKPFRG T  +A V +A +  +    G   +  Y+++++G  TP Q+  VC +L   Q  +F+ +  T+    MLN
Sbjct:   10 SPTRKRPRTQNSATKGKRPPLGNRHSNGRLSQIRVEMDSVADIREANMP-TLTDLIGGGRSRAEQFLGEEAPNNIWASFGNTLDNMGSLSNLPTVIGNDDASKVVYDADSRAFSEQLERDENVSERKFDQIPMDLTLKRKVDVVSKSTLRWALRRGQGDEYGALAKLTNGKSSTANDERQDPVSRNDRNRLEDDSNVLQARSNVDEDVLNWKKCLYKALLHFRCPGESLPKVISSRWQVLTSNYGRASWQEHALHDEKKFAVHRLINWQSAFQSLYFGYRHGHIPDFYVLLQTTTVLFNRGKPWAGSKKRRRSTAMVSSANDNQSSCFRASVAKASTGLRALMSEHEVPFTLVERPSSFE---DPGVVVEGDFAIHALFNFLLSRGPGISNADDVPLLVCDKPFRGSTIYSAEVLNARQMLIPGKPGEQPEHRYTMQLSGLFTPGQISDVCNSLAKIQRGEFAARFNTDEAGNMLN 481          
The following BLAST results are available for this feature:
BLAST of Gvermi8035.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IHG6_9FLOR8.290e-20562.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQV4_CHOCR6.100e-7335.08Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availablePANTHERPTHR12972:SF0PROTEIN DOWNSTREAM NEIGHBOR OF SONcoord: 87..445
IPR024861DonsonPANTHERPTHR12972DOWNSTREAM NEIGHBOR OF SONcoord: 87..445

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:771571..773028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8035.t1Gvermi8035.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 771571..773028 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8035.t1 ID=Gvermi8035.t1|Name=Gvermi8035.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=486bp
MAPPRKRPRIQPVSAKRPPAPPRQSRSRPSLHDDASRPRTLVDLLRPNAS
RAEQVLGDDAPNDAWSVLANTVDNLPSHATQHPPVHDSHPDAAVDLHQTQ
HQQLPVDLSIKTSLNITSSKSLWWTRVRGQAEEYEALHDLLSGVDTLAAA
NVVRPPLGSDAVVEAQVLTDTLTSAKRQFYRALLHFRYPCTTLPPVISRR
WQTVFASSARTRPDSALQEAANVAMERLHLWQSALQSLFFGYKRGHIDHF
YILLPSTTLLFSHAAAHSATSVPKRPAHVPSPSDSPLRACFANGSLGLRS
LLSDYAVPFRLLHPPNASEAHSEPPVIAEGRVAVQAVYNFVMSVGHKISN
AADVPVLLCDKPFRGGTAITANVTDADEANVINSAGGATKLTYSVKINGF
LTPRQVRAVCKALVDTQDRDFSVQMITEARSQMLNVCDQSISLLSADGPT
SSQQTTSCPIQGRVLSRVTRQTASPNFVLFTRAIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024861Donson