Gvermi803.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi803.t1
Unique NameGvermi803.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length157
Homology
BLAST of Gvermi803.t1 vs. uniprot
Match: R7Q2U6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2U6_CHOCR)

HSP 1 Score: 137 bits (346), Expect = 7.550e-36
Identity = 77/156 (49.36%), Postives = 103/156 (66.03%), Query Frame = 0
Query:    2 FNKTIASRLKHYVAEHQKDWDAYVGLLTYAYNLQVHRSTGTAPFNLVLSRIPPSTSIAPRATAHPADGPQAPTAAQAKRSILRRYENALSLAKERLNASQRSNKQDFDRKVMEGPHLKEGDEVFLDTLGKTSDEPL---DITRKLMPTTSGPYKVL 154
            FN+T+A+RL+HYV+EHQ+DWD YV  LTYAYN+QVH+STGT PF+LVL+R PP  S+   ++A P+     PT+AQ KR  L+R    LS A  +L  +Q   K++FD+ V   P  + G EVFLD     S  PL   D  RKL+P T+GPY+ +
Sbjct:  142 FNRTLATRLRHYVSEHQRDWDDYVQPLTYAYNMQVHKSTGTTPFDLVLTRHPPGISVQAPSSAIPSPNGSEPTSAQMKRITLQRVRKILSRAGTKLTHAQAQYKRNFDKAVRTLPSFEVGQEVFLDRPPDFSATPLENEDGHRKLLPKTTGPYRFI 297          
BLAST of Gvermi803.t1 vs. uniprot
Match: R7QR94_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR94_CHOCR)

HSP 1 Score: 134 bits (337), Expect = 1.570e-33
Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 0
Query:    2 FNKTIASRLKHYVAEHQKDWDAYVGLLTYAYNLQVHRSTGTAPFNLVLSRIPPSTSIAPRATAHPADGPQAPTAAQAKRSILRRYENALSLAKERLNASQRSNKQDFDRKVMEGPHLKEGDEVFLDTLGKTSDEPL---DITRKLMPTTSGPYKVL 154
            FN+T+A+RL+HYV+EHQ+DWD YV  LTYAYN+QVH+ST T PF+L+L+R PP  S+   ++A P+     PT+AQ K   L+R    LS A  +L  +Q   K++FD+ V   P  + G EVFLD     S  PL   D  RKL+P T+GPY+V+
Sbjct:  526 FNRTLATRLRHYVSEHQRDWDDYVQPLTYAYNMQVHKSTSTTPFDLILTRHPPGISVQAPSSAIPSPNGSEPTSAQMKPITLQRVRKILSRAGTKLTHAQAQYKRNFDKAVRTLPSFEVGQEVFLDRPPDFSATPLENEDGHRKLLPKTTGPYRVI 681          
BLAST of Gvermi803.t1 vs. uniprot
Match: R7QU67_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU67_CHOCR)

HSP 1 Score: 119 bits (298), Expect = 2.560e-29
Identity = 71/170 (41.76%), Postives = 104/170 (61.18%), Query Frame = 0
Query:    2 FNKTIASRLKHYVAEHQKDWDAYVGLLTYAYNLQVHRSTGTAPFNLVLSRIPPSTSIA---PRATAHPADGPQAPTAAQAKRSILRRYENALSLAKERLNASQRSNKQDFDRKVMEGPHLKEGDEVFLDT---------------LGKTSDEPLDITRKLMPTTSGPYKV 153
            FNKTI  RL+HYV EHQ+DWD ++  L YAYN+QVHRST T PF+LVL+R P   ++A   P+A     D P+ P   Q KR+ LR+  + L  A+ ++ A+Q+  K++FD+KV   P ++EGD+V++D                 G  +D   D++ KL+P T GP++V
Sbjct:  114 FNKTIVQRLRHYVEEHQRDWDEFLQPLAYAYNIQVHRSTETTPFDLVLTRQPSGLTVAGTAPQAAGVAHDDPRTPV--QYKRATLRKLRDVLDRARVKMTAAQKRYKENFDKKVRFRPVIQEGDQVYVDRPPPALRAAERRGRDGQGLGTD---DMSVKLLPKTEGPFRV 278          
BLAST of Gvermi803.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR)

HSP 1 Score: 117 bits (293), Expect = 1.320e-27
Identity = 75/170 (44.12%), Postives = 100/170 (58.82%), Query Frame = 0
Query:    2 FNKTIASRLKHYVAEHQKDWDAYVGLLTYAYNLQVHRSTGTAPFNLVLSRIPPSTSIAPRATAHPA----DGPQAPTAAQAKRSILRRYENALSLAKERLNASQRSNKQDFDRKVMEGPHLKEGDEVFLD--------------TLGKTSDEPLDITRKLMPTTSGPYKV 153
            FN+T+  RL+HYV EHQ+DWD YV  LT+AYN QVHRST T PF+LVL+R PPS  I P      A    + P+ P   Q KR+ LR+  +AL  A+ +L+ASQ+  K DFD+KV   P +  GD V++D                G T  + L +  KL+P T GP++V
Sbjct:  512 FNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTR-PPSGLILPGTVPQDAGTHREDPRTPV--QYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPPRPLTSVERRTRAQGTTGTDELSV--KLLPKTEGPFRV 676          
BLAST of Gvermi803.t1 vs. uniprot
Match: R7QJ93_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ93_CHOCR)

HSP 1 Score: 114 bits (284), Expect = 1.940e-26
Identity = 70/164 (42.68%), Postives = 99/164 (60.37%), Query Frame = 0
Query:    2 FNKTIASRLKHYVAEHQKDWDAYVGLLTYAYNLQVHRSTGTAPFNLVLSRIPPSTSI---APRATAHPADGPQAPTAAQAKRSILRRYENALSLAKERLNASQRSNKQDFDRKVMEGPHLKEGDEVFLDTLGK--TSDEPLDITR-------KLMPTTSGPYKV 153
            FN+T+  RL+HYVAEHQ+DWD Y+  LT+AYN QVHRST T PF+LVL+R P   ++    P+      + P+ P   Q KR+ LR+  +AL   + +L A+QR  K DFD+KV     ++ GD V++D   +  TS E  D+         KL+P T GP++V
Sbjct:  432 FNRTLVQRLRHYVAEHQRDWDEYIQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLALPGTVPQDAVSNTEDPRTPV--QYKRATLRKLRDALERTRVKLTAAQRRYKADFDKKVRFRSVIQVGDLVYVDRPPRPLTSTERGDLPSNDGGPSVKLLPKTEGPFRV 593          
BLAST of Gvermi803.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 113 bits (282), Expect = 4.040e-26
Identity = 71/168 (42.26%), Postives = 98/168 (58.33%), Query Frame = 0
Query:    2 FNKTIASRLKHYVAEHQKDWDAYVGLLTYAYNLQVHRSTGTAPFNLVLSRIPPSTSIAPRATAHPA----DGPQAPTAAQAKRSILRRYENALSLAKERLNASQRSNKQDFDRKVMEGPHLKEGDEVFLDTLGKT------------SDEPLDITRKLMPTTSGPYKV 153
            FN+T+  RL+HYV EHQ+DWD YV  LT+AYN QVHRST T PF+LVL+R PP+  I P      A    + P+ P   Q KR+ LR+  +AL  A+ +L ASQ+  K + DRKV   P ++ GD V++D   +T              +  D++ KL+P   GP+ V
Sbjct:  608 FNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTR-PPTGLILPGTVPQDAGTHMEDPRTPV--QYKRATLRKLRDALDRARTKLTASQKQYKDNLDRKVRFRPVVRAGDFVYVDRPPRTLTSVERRMRVQSPTDTEDLSVKLLPKAEGPFNV 772          
BLAST of Gvermi803.t1 vs. uniprot
Match: R7Q4X3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X3_CHOCR)

HSP 1 Score: 111 bits (278), Expect = 6.200e-26
Identity = 68/152 (44.74%), Postives = 92/152 (60.53%), Query Frame = 0
Query:    2 FNKTIASRLKHYVAEHQKDWDAYVGLLTYAYNLQVHRSTGTAPFNLVLSRIPPSTSIAPRATAHPADGPQAPTAAQAKRSILRRYENALSLAKERLNASQRSNKQDFDRKVMEGPHLKEGDEVFLDTLGKTSDEPLDITRKLMPTTSGPYKV 153
            FN+T+  RL+HYV EHQ+DWD Y+  LT+AYN QVHRST T PF+LVL+R PPS  I P       + P+ P   Q KR+ LR+  +AL  A+ +L+ASQ+  K DFD+KV   P +  GD V++D        PL    +      GP++V
Sbjct:  224 FNRTLVQRLRHYVEEHQRDWDDYLQPLTFAYNTQVHRSTETTPFDLVLTR-PPSGLILP-------EDPRTPV--QYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDR----PPRPLTSVERRTRAQEGPFRV 361          
BLAST of Gvermi803.t1 vs. uniprot
Match: A0A2V3J488_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J488_9FLOR)

HSP 1 Score: 87.0 bits (214), Expect = 1.070e-17
Identity = 53/134 (39.55%), Postives = 71/134 (52.99%), Query Frame = 0
Query:   21 WDAYVGLLTYAYNLQVHRSTGTAPFNLVLSRIPPSTSIAPRATAHPADGPQAPTAAQAKRSILRRYENALSLAKERLNASQRSNKQDFDRKVMEGPHLKEGDEVFLDTLGKTSDEPLDITRKLMPTTSGPYKVL 154
            WD YV  L YAYN  VHRSTGT PF + L R PP   +  + T  P D     T+AQAKR   +R ++ L   +     +Q+  K DFD+ +        GD V+LD   K      DI  KL+P ++GPY+V+
Sbjct:    3 WDDYVQPLVYAYNNLVHRSTGTTPFEITLVRAPPPYIVVLQDTGIPQDVTGKMTSAQAKRYSRKRIDSKLKAPQTHFGKAQKRYKADFDKSICFVRKFSPGDYVYLDRPPKEKHLAEDIAAKLVPRSTGPYRVI 136          
BLAST of Gvermi803.t1 vs. uniprot
Match: UPI001E1D71BC (uncharacterized protein LOC123543955 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D71BC)

HSP 1 Score: 83.6 bits (205), Expect = 3.530e-16
Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 0
Query:    2 FNKTIASRLKHYVAEHQKDWDAYVGLLTYAYNLQVHRSTGTAPFNLVLSRIPPSTSIAPRATAHPADGPQAPTAAQAKRSILRRYENALSLAKERLNASQRSNKQDFDRKVME-GPHLKEGDEVFLDTLGKTSDEPLDITRKLMPTTSGPYKVLAT 156
            FN+TI + L+ YV   Q DWD Y   +T+ YN +VH S   APF L+LSR PP+ S+ P      ++     T   AK   L R +  + LA+ RL  +Q   K++FDR + E    +  G  V+L    +          KL     GPY+V+AT
Sbjct:   63 FNRTIINSLRGYVERRQNDWDEYTSAITFGYNCRVHSSLNLAPFELILSRPPPTLSVGP------SEAEAQDTPVSAKLRFLTRVKELVPLAQTRLAEAQAQYKKNFDRSIKEKNKDVSPGSWVYL----RREVHEAGRNPKLDDQVDGPYQVIAT 208          
BLAST of Gvermi803.t1 vs. uniprot
Match: R7Q7I0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7I0_CHOCR)

HSP 1 Score: 77.8 bits (190), Expect = 7.790e-14
Identity = 38/59 (64.41%), Postives = 45/59 (76.27%), Query Frame = 0
Query:    2 FNKTIASRLKHYVAEHQKDWDAYVGLLTYAYNLQVHRSTGTAPFNLVLSRIPPSTSIAP 60
            FN+T+  RL+HYV EHQ+DWD YV  LT+AYN QVHRST T PF+LVL+  PPS  I P
Sbjct:  354 FNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTH-PPSGLILP 411          
The following BLAST results are available for this feature:
BLAST of Gvermi803.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
R7Q2U6_CHOCR7.550e-3649.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QR94_CHOCR1.570e-3348.08Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QU67_CHOCR2.560e-2941.76Integrase catalytic domain-containing protein n=1 ... [more]
R7QN04_CHOCR1.320e-2744.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QJ93_CHOCR1.940e-2642.68Integrase catalytic domain-containing protein n=3 ... [more]
R7QLF2_CHOCR4.040e-2642.26Integrase catalytic domain-containing protein n=1 ... [more]
R7Q4X3_CHOCR6.200e-2644.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J488_9FLOR1.070e-1739.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
UPI001E1D71BC3.530e-1635.26uncharacterized protein LOC123543955 n=1 Tax=Merce... [more]
R7Q7I0_CHOCR7.790e-1464.41Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..76
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..103
e-value: 3.1E-9
score: 38.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:412882..413352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi803.t1Gvermi803.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 412882..413352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi803.t1 ID=Gvermi803.t1|Name=Gvermi803.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=157bp
MFNKTIASRLKHYVAEHQKDWDAYVGLLTYAYNLQVHRSTGTAPFNLVLS
RIPPSTSIAPRATAHPADGPQAPTAAQAKRSILRRYENALSLAKERLNAS
QRSNKQDFDRKVMEGPHLKEGDEVFLDTLGKTSDEPLDITRKLMPTTSGP
YKVLAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf