Gvermi8023.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8023.t1
Unique NameGvermi8023.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length192
Homology
BLAST of Gvermi8023.t1 vs. uniprot
Match: A0A2V3IHF3_9FLOR (Chromophore lyase CpcS/CpeS 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHF3_9FLOR)

HSP 1 Score: 292 bits (748), Expect = 3.820e-98
Identity = 151/191 (79.06%), Postives = 163/191 (85.34%), Query Frame = 0
Query:    1 MVAQPASRAPFSTVGMTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEICIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSGHTVLAVTKHSEHSGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIRRLNL 191
            MVA+ +S   FST GMTVE+FFERS G+WRSQRSSHILAFAQFEAITSEI IE ++  D+R K LAA H V   EI+I I+M WEGESDWDDDTEG LSG T LAVTK SE SGKLLRSSGYAE+IPAVGEW MTD G+FVLET YEAAAAEERIWFATKDLR+RVSQIRTSSGAGVVSASMSTEIRRL L
Sbjct:   40 MVAETSSPVAFSTAGMTVEEFFERSSGLWRSQRSSHILAFAQFEAITSEISIESVSVSDERIKALAAQHDVPQGEIAIGIHMRWEGESDWDDDTEGPLSGETTLAVTKGSEKSGKLLRSSGYAESIPAVGEWHMTDGGVFVLETLYEAAAAEERIWFATKDLRIRVSQIRTSSGAGVVSASMSTEIRRLKL 230          
BLAST of Gvermi8023.t1 vs. uniprot
Match: R7Q9S3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9S3_CHOCR)

HSP 1 Score: 216 bits (550), Expect = 7.660e-69
Identity = 110/174 (63.22%), Postives = 136/174 (78.16%), Query Frame = 0
Query:   16 MTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEICIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSGHTVLAVTKHSEHSGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIRRL 189
            MTV++FFE+S+G W SQRSSH LA+AQFEAITS+I I +  A+D     L   H++A++E  ++I MSWEGESDWD+D   E  G  V++V K    +G+LLRS GYAETIPAVG+W MT++G+FVL T YEAAAAEERIWFAT +LRMRVS IRTSSG GVV+AS STEIR+L
Sbjct:    1 MTVDEFFEKSVGEWSSQRSSHNLAWAQFEAITSDITITKKTANDDEVVSLCRQHEIAVEETDVSIAMSWEGESDWDEDEVME--GTAVMSVVKDGPANGRLLRSVGYAETIPAVGKWEMTEDGVFVLHTFYEAAAAEERIWFATPNLRMRVSLIRTSSGNGVVTASFSTEIRKL 172          
BLAST of Gvermi8023.t1 vs. uniprot
Match: A0A5J4YKK7_PORPP (Chromophore lyase CpcS/CpeS 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKK7_PORPP)

HSP 1 Score: 215 bits (548), Expect = 2.930e-67
Identity = 112/186 (60.22%), Postives = 136/186 (73.12%), Query Frame = 0
Query:    3 AQPASRAPFSTVGMTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEICIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSGHTVLAVTKHSEHSGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIRR 188
            AQP    PFS  GM VE+FF+RSIG WRSQRSSH L + QFE + SEI IE + A+D+  K +   +K   D I++AI MSWEG SDWD+D    L G TVL V K SE SG+LLRS GYAE IPAVG+WRM  +G+FVL+T+Y+ A AEERIWFAT DLRMRVS I+T+   GV++AS S+EIRR
Sbjct:   82 AQP----PFSARGMGVEEFFQRSIGEWRSQRSSHNLLWQQFEQVESEIVIENVTAEDEEVKGVCEQYKADADSIALAIRMSWEGTSDWDEDEV--LKGSTVLVVLKDSETSGRLLRSVGYAEEIPAVGQWRMETDGVFVLDTSYDRAGAEERIWFATPDLRMRVSMIKTAGNTGVLTASFSSEIRR 261          
BLAST of Gvermi8023.t1 vs. uniprot
Match: A0A7S1ET48_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET48_9RHOD)

HSP 1 Score: 209 bits (533), Expect = 5.310e-65
Identity = 107/181 (59.12%), Postives = 132/181 (72.93%), Query Frame = 0
Query:   11 FSTVGMTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEICIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSGHTVLAVTKHSE---HSGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIRR 188
            FS   MTV DFF RSIG W+SQRSSH LA+A FE++ S+I IE ++  D    E+   +  A+D    AI MSWEG SDWD+D    L G TVL V K+ +     GKLLRS GYAETIPAVGEW+MT++G+F+L T Y+ AAAEERIWFATKDLRMRVS I+TS+G GV++AS S+EIR+
Sbjct:   79 FSAWNMTVSDFFSRSIGTWKSQRSSHNLAWAHFESVNSDIVIESLSLSDSEVIEICEKYDTAMDSALCAIRMSWEGTSDWDEDEV--LKGSTVLVVVKNEQGGDKEGKLLRSEGYAETIPAVGEWKMTEDGVFILNTFYDRAAAEERIWFATKDLRMRVSMIKTSAGTGVLNASFSSEIRQ 257          
BLAST of Gvermi8023.t1 vs. uniprot
Match: A0A7S1XFR2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFR2_9RHOD)

HSP 1 Score: 201 bits (510), Expect = 6.800e-62
Identity = 104/179 (58.10%), Postives = 128/179 (71.51%), Query Frame = 0
Query:   11 FSTVGMTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEICIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSGHTVLAVTKHSEHSGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIRRL 189
            +S  GMTVE FF++S+G W+SQRSSH LAF+ FE I SE+ IE + A D   + + A +      I I+I MSWEGESDWD++ E  L G TVL V K S  SG+LLRS GYAETIPA+G+W M D+G FVL T Y+ A+AEERIWFA  DLR+RVS IRT  G GV +AS S+EIRR+
Sbjct:   61 YSPAGMTVEGFFDKSLGRWQSQRSSHNLAFSHFEEIRSELVIESVDAQDDAVQNICATYGEDPATIDISIRMSWEGESDWDENEE--LKGSTVLVVIKDSPTSGRLLRSEGYAETIPAIGQWTMQDDGCFVLLTPYDRASAEERIWFAGPDLRLRVSLIRTQLGRGVATASFSSEIRRI 237          
BLAST of Gvermi8023.t1 vs. uniprot
Match: L1JFC7_GUITC (Putative phycoerythrin lyase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JFC7_GUITC)

HSP 1 Score: 193 bits (491), Expect = 8.320e-59
Identity = 97/177 (54.80%), Postives = 125/177 (70.62%), Query Frame = 0
Query:   11 FSTVGMTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEICIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSGHTVLAVTKHSEHSGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIR 187
            ++  GM+VE+FFERS+G WRS RSSH +AFAQ E + S+I I ++AADD    ++   +    ++   +I MSWEG SDWD++    + G TVL + K  E  GKLLRS GY ETIPAVGEW M ++G FVL T Y+ AAAEERIWFAT DLRMR S I+T  G GV++AS+STE+R
Sbjct:   75 WTAAGMSVEEFFERSVGSWRSLRSSHNIAFAQLEEVNSDIDITQVAADDSEFLDICKTYNFEPEKACSSIRMSWEGSSDWDENEV--IKGSTVLVLYKDEERKGKLLRSVGYTETIPAVGEWTMQEDGTFVLHTFYDRAAAEERIWFATPDLRMRCSIIKTQHGKGVLTASLSTEVR 249          
BLAST of Gvermi8023.t1 vs. uniprot
Match: UPI0004E5BCA6 (Putative phycoerythrin lyase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=UPI0004E5BCA6)

HSP 1 Score: 190 bits (483), Expect = 1.860e-58
Identity = 96/172 (55.81%), Postives = 122/172 (70.93%), Query Frame = 0
Query:   16 MTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEICIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSGHTVLAVTKHSEHSGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIR 187
            M+VE+FFERS+G WRS RSSH +AFAQ E + S+I I ++AADD    ++   +    ++   +I MSWEG SDWD++    + G TVL + K  E  GKLLRS GY ETIPAVGEW M ++G FVL T Y+ AAAEERIWFAT DLRMR S I+T  G GV++AS+STE+R
Sbjct:   16 MSVEEFFERSVGSWRSLRSSHNIAFAQLEEVNSDIDITQVAADDSEFLDICKTYNFEPEKACSSIRMSWEGSSDWDENEV--IKGSTVLVLYKDEERKGKLLRSVGYTETIPAVGEWTMQEDGTFVLHTFYDRAAAEERIWFATPDLRMRCSIIKTQHGKGVLTASLSTEVR 185          
BLAST of Gvermi8023.t1 vs. uniprot
Match: A0A7S2ZUG7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZUG7_9RHOD)

HSP 1 Score: 186 bits (471), Expect = 5.270e-56
Identity = 98/185 (52.97%), Postives = 122/185 (65.95%), Query Frame = 0
Query:    5 PASRAPFSTVGMTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEICIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSGHTVLAVTKHSEHSGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIRRL 189
            P     +ST GMTVEDFF+ SIG WRS RSSH LA +  E + SEI IE +    +    +   ++      + AI MSWEG SDWD+D    L G T+L + K  +  G+LLRS GYAET+PAVGEW M  +G FVL T YE A+AEERIWF T ++R+RVS IRT +G GV++ASMSTEIR L
Sbjct:   54 PVQTGVYSTAGMTVEDFFKNSIGSWRSMRSSHNLAMSFMEEVNSEIEIEPVELAHESVLAICKQYETDPATAATAIKMSWEGTSDWDEDEV--LEGSTLLVLVKDEDAKGRLLRSEGYAETVPAVGEWSMEADGTFVLITPYERASAEERIWFTTPNMRVRVSFIRTQTGEGVLTASMSTEIREL 236          
BLAST of Gvermi8023.t1 vs. uniprot
Match: A0A6I5PBU2_9CYAN (Chromophore lyase CpcS/CpeS n=2 Tax=Leptolyngbyaceae TaxID=1890438 RepID=A0A6I5PBU2_9CYAN)

HSP 1 Score: 181 bits (458), Expect = 7.400e-55
Identity = 93/173 (53.76%), Postives = 120/173 (69.36%), Query Frame = 0
Query:   16 MTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEICIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSGHTVLAVTKHSEHSGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIRR 188
            M +E F ERS+G WRSQRS+H LAF  FE + S I IE +  D+    EL   ++V+L+ I     MSWEGESDWD+D    L G T+L     S  +GKLLR  GYAET+ A+G++ +TD+G F+L TAY+ AAAEE+IWFAT +LR RVS I+TSSG GV +AS S+E+RR
Sbjct:    1 MDIETFVERSLGEWRSQRSAHHLAFGHFEEVRSNIKIEALTLDNPGVLELCQRYEVSLENIVSPFKMSWEGESDWDEDEV--LEGSTILIPVPDSATTGKLLREQGYAETMEAMGDYCLTDDGTFILTTAYDRAAAEEKIWFATPNLRFRVSLIKTSSGKGVTTASFSSEVRR 171          
BLAST of Gvermi8023.t1 vs. uniprot
Match: A0A1Z4L9A9_NOSLI (Chromophore lyase CpcS/CpeS n=6 Tax=Nostoc TaxID=1177 RepID=A0A1Z4L9A9_NOSLI)

HSP 1 Score: 180 bits (456), Expect = 1.640e-54
Identity = 95/177 (53.67%), Postives = 121/177 (68.36%), Query Frame = 0
Query:   16 MTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEICIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSGHTVLAVTKHSEH--SGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIRRLN 190
            M + +FFE SIG WRSQRS H LAFA FE + S I IE ++ DD   +E+  L+ V+  +I+    M+WEGESDWDD     +SG TVL      E+   GKLLR  GYAETIPAVG++ ++D+G+F L T Y+ AAAEERIWFA  +LR RVS I+TS G GV +AS S+EIR L+
Sbjct:    1 MKITEFFELSIGRWRSQRSGHHLAFAHFEEVLSTIDIESLSTDDPAVREICKLYDVSTSDITHPFRMTWEGESDWDDKP---ISGSTVLVPIPDIENPSKGKLLREKGYAETIPAVGKYHLSDDGVFTLLTQYDLAAAEERIWFANPNLRFRVSMIKTSDGKGVTTASFSSEIRSLS 174          
The following BLAST results are available for this feature:
BLAST of Gvermi8023.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHF3_9FLOR3.820e-9879.06Chromophore lyase CpcS/CpeS 3 n=1 Tax=Gracilariops... [more]
R7Q9S3_CHOCR7.660e-6963.22Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YKK7_PORPP2.930e-6760.22Chromophore lyase CpcS/CpeS 3 n=1 Tax=Porphyridium... [more]
A0A7S1ET48_9RHOD5.310e-6559.12Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1XFR2_9RHOD6.800e-6258.10Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
L1JFC7_GUITC8.320e-5954.80Putative phycoerythrin lyase n=3 Tax=Guillardia th... [more]
UPI0004E5BCA61.860e-5855.81Putative phycoerythrin lyase n=1 Tax=Guillardia th... [more]
A0A7S2ZUG7_9RHOD5.270e-5652.97Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A6I5PBU2_9CYAN7.400e-5553.76Chromophore lyase CpcS/CpeS n=2 Tax=Leptolyngbyace... [more]
A0A1Z4L9A9_NOSLI1.640e-5453.67Chromophore lyase CpcS/CpeS n=6 Tax=Nostoc TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018536Chromophore lyase CpcS/CpeSPFAMPF09367CpeScoord: 18..188
e-value: 6.3E-51
score: 172.6
IPR018536Chromophore lyase CpcS/CpeSHAMAPMF_01459Chrphore_lyase_CpxScoord: 16..188
score: 24.635406
IPR012674CalycinGENE3D2.40.128.20coord: 8..190
e-value: 3.2E-55
score: 188.8
NoneNo IPR availableCDDcd16339CpcScoord: 20..188
e-value: 1.53691E-47
score: 151.327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:682388..682963 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8023.t1Gvermi8023.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 682388..682963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8023.t1 ID=Gvermi8023.t1|Name=Gvermi8023.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=192bp
MVAQPASRAPFSTVGMTVEDFFERSIGVWRSQRSSHILAFAQFEAITSEI
CIERIAADDQRTKELAALHKVALDEISIAIYMSWEGESDWDDDTEGELSG
HTVLAVTKHSEHSGKLLRSSGYAETIPAVGEWRMTDEGMFVLETAYEAAA
AEERIWFATKDLRMRVSQIRTSSGAGVVSASMSTEIRRLNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018536CpcS/CpeS
IPR012674Calycin