Gvermi8022.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8022.t1
Unique NameGvermi8022.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length504
Homology
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BLAST of Gvermi8022.t1 vs. uniprot
Match: A0A2V3IHG5_9FLOR (F-box domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG5_9FLOR)

HSP 1 Score: 527 bits (1358), Expect = 2.400e-181
Identity = 263/487 (54.00%), Postives = 337/487 (69.20%), Query Frame = 0 
Query:    7 KQKKCAALPADAWRQVASHLSTADLANLSQVSIACRTAALSPDLFAKHLRCQPPSDLLSTTSYETIYQHSKSMQHVPIPTTVRSPAYKRVNVGILGSVSSYLILYDQSEGSVSCPSVGWRRNISELLLGEWGIRLQSSLLSAASC--GQTSPFPPHAFVAKRFLEMPHCKAGFFCNGGKSFGGNLLTICARTGKTIDQVFLPANEAHTGIEFLTGSENPKLALLGGINSQYLVYFTHKSFNIMHRSTGTIVNKWSRMPESLLIRGETSFNAPLITGVVACDTGENEKNYHIHLLEGGASEYSFSIDSKDELIDVTRSRDGRTITKRISSEGIVKLWTVVQRNAMFHWLQGLRASNKSGEVEMRSNGTQVFMRPRGGDGRIIRFTYGSFVREDKIARRVQGMSFDWARASWDGRVVLAVSRKGGFISIFDCDEGRCLKSVSIGDELDDLILVDGHMLVCLTHKDIIECHFNRFCQCLGAFPVHCESGE 491
            ++ KCA+LP D WR VAS L  +DL NL+ VS  CR AALSPDLFAKHL  QPP+DLLSTTSY TIY++S S++  P+ + V SP  ++  + ILGSVS  LI+YD++ G VS     WRR+ISEL+        ++  +S +S    ++ PF    FV++RFLE+P+C+ GF  +         +T+ A TG+T+  +FLP N          G + P+  LLGG  SQY+VYF  +   ++ R  GT+V KW    ES+L+RGETSFNAPLITGVV CD  E+ K YHIH LEGG+S+Y F ID  D LIDV +SRDG TI+KR+SS   VKLWTVV  + +FHW Q L  SN++G +EMRSNG+Q+ +RP GG GRI+R  YG  VR +++ARRVQ  +FDWARASWDGR+VLAVSR  GF+SIFDCDEGRCLKSVSIGD++DDL+LVDGH+LV LT   I+ECHF RFC C G F    ++ E
Sbjct:   17 RETKCASLPPDVWRHVASFLPKSDLVNLALVSQTCRAAALSPDLFAKHLSIQPPADLLSTTSYPTIYRNSHSLRLTPLISKVFSPDVRKAKLAILGSVSKLLIMYDENTGMVSTYPNEWRRDISELISKTAAENNENEEMSDSSSPKDESKPFQ-RQFVSERFLELPNCEIGFLSDAKNGIRKTFVTVNAETGQTVRTMFLPTNVGDELGRLAFGMDKPRRILLGGNESQYMVYFVGRMLFVIRRDEGTLVKKWPNAEESMLVRGETSFNAPLITGVVRCDGFEDRKQYHIHTLEGGSSDYHFCIDQHDTLIDVAQSRDGNTISKRVSSAKKVKLWTVVHHDIIFHWYQKLPLSNRTGALEMRSNGSQILIRPEGGGGRIVRINYGLPVRVEQLARRVQSSAFDWARASWDGRIVLAVSRSSGFLSIFDCDEGRCLKSVSIGDQIDDLVLVDGHILVALTPGHIVECHFKRFCGCEGLFGERQQAAE 502
The following BLAST results are available for this feature:
BLAST of Gvermi8022.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHG5_9FLOR2.400e-18154.00F-box domain-containing protein n=1 Tax=Gracilario... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 12..62
NoneNo IPR availableSUPERFAMILY63829Calcium-dependent phosphotriesterasecoord: 296..465

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:679760..681271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8022.t1Gvermi8022.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 679760..681271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8022.t1 ID=Gvermi8022.t1|Name=Gvermi8022.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=504bp
MLNPSFKQKKCAALPADAWRQVASHLSTADLANLSQVSIACRTAALSPDL
FAKHLRCQPPSDLLSTTSYETIYQHSKSMQHVPIPTTVRSPAYKRVNVGI
LGSVSSYLILYDQSEGSVSCPSVGWRRNISELLLGEWGIRLQSSLLSAAS
CGQTSPFPPHAFVAKRFLEMPHCKAGFFCNGGKSFGGNLLTICARTGKTI
DQVFLPANEAHTGIEFLTGSENPKLALLGGINSQYLVYFTHKSFNIMHRS
TGTIVNKWSRMPESLLIRGETSFNAPLITGVVACDTGENEKNYHIHLLEG
GASEYSFSIDSKDELIDVTRSRDGRTITKRISSEGIVKLWTVVQRNAMFH
WLQGLRASNKSGEVEMRSNGTQVFMRPRGGDGRIIRFTYGSFVREDKIAR
RVQGMSFDWARASWDGRVVLAVSRKGGFISIFDCDEGRCLKSVSIGDELD
DLILVDGHMLVCLTHKDIIECHFNRFCQCLGAFPVHCESGETKVESNDKN
SGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf