Gvermi8019.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8019.t1
Unique NameGvermi8019.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length396
Homology
BLAST of Gvermi8019.t1 vs. uniprot
Match: A0A2V3IHJ0_9FLOR (Protein RETICULATA-RELATED 4, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHJ0_9FLOR)

HSP 1 Score: 544 bits (1402), Expect = 1.530e-191
Identity = 292/402 (72.64%), Postives = 330/402 (82.09%), Query Frame = 0
Query:    1 MEKHTAFVARFPFSAARPASNPSPVSCTRYA-PRIARSAPRAHTLCALTPIESGAADFDFLPIATVAIYDFHAEDDS-----TAQPAYEGGSV-PPSGSSXXXXXXXXXXDSPSAPDAKLTSLLRDSNAALADVPADILSAYREGLIPLSAISNFFSARANILSRALMGAGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTKASTGKGLSSWISNLSKTLPSNIFQTDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSLIFIREKLDKTYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIFPRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQKVKE 395
            M   TAFV+  PF AA  +   +  +C R   P   +   R   + +L+PIE GA+DFDF+P+  +       E+DS     T QPAY+GG+V PP+  S   XXXXX   +P A D  LT+LLRDS AA++D+PADIL+AYR GLIP+SAISN+FSARANILSR LMGAGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRR NFW EKEFVFANL+TALLADFALVYLPAPSVSLTKAST KG+ +WI+NLS+TLPSNIFQTDRPFTLAQRA GF LKASQLFVVGMACCFTGVILTNSL+FIRE+LDK YV KTQKQNP+LVSVLYA+FLGASSGTRYQLVNGVENH+FPR+F   PQ++EEA+TFLLRY NTFWGSQQWVMFCRFTNVQK KE
Sbjct:    1 MSTFTAFVSLQPFPAASVSHLSNSATCIRLPLPARIQQRRRYSVISSLSPIEHGASDFDFVPVVNLTSSSMLPEEDSGAQNWTEQPAYDGGAVRPPTSGSGSGXXXXXDGATPPASDEPLTALLRDSKAAISDIPADILAAYRGGLIPVSAISNYFSARANILSRLLMGAGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRKNFWKEKEFVFANLITALLADFALVYLPAPSVSLTKASTEKGIKAWIANLSRTLPSNIFQTDRPFTLAQRAGGFALKASQLFVVGMACCFTGVILTNSLVFIRERLDKGYVPKTQKQNPLLVSVLYAIFLGASSGTRYQLVNGVENHVFPRVFSKTPQLLEEAATFLLRYVNTFWGSQQWVMFCRFTNVQKTKE 402          
BLAST of Gvermi8019.t1 vs. uniprot
Match: A0A1X6P946_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P946_PORUM)

HSP 1 Score: 295 bits (754), Expect = 6.080e-93
Identity = 161/291 (55.33%), Postives = 192/291 (65.98%), Query Frame = 0
Query:  125 ADVPADILSAYREGLIPLSAISNFFSARANILSRALMGAGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTKASTG--KGLSSWISNLSKTLPSNIFQTDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSLIFIREKL----------------------DKTYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIFPRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQ 391
            ADVPADIL+A   G +  S ++ +  A AN LSR LM  G  MRNRFLAD+LF+LKI IEE IGIFGKLSAEY++RR  F  E +FVFANLVTALLADFAL  LPAPSV+L  A+     G   W++ L    PSNIFQTDRPFTLAQRA GF +K SQLF VG  CC  G ++T+ L+  R  L                           +K + +N VLVS+ YA FLG SSG+RYQLVNGVE H+FPR+F++ P +VEE +TF LR GNTFWGS QWV F  +T VQ
Sbjct:  144 ADVPADILAAVARGTVTASVMAAWARAAANPLSRLLMATGPAMRNRFLADELFMLKIGIEEAIGIFGKLSAEYDKRRERFLPEADFVFANLVTALLADFALTALPAPSVALDGAAAAVKSGFGVWVAGL----PSNIFQTDRPFTLAQRAGGFAVKGSQLFAVGFLCCLLGQVMTSGLLLARRALPTPPSQRPAAGXXXXXXVAPGPSAAEAAKDKLRNVVLVSLAYATFLGVSSGSRYQLVNGVEAHLFPRLFKATPPIVEEVATFALRLGNTFWGSSQWVTFATYTGVQ 430          
BLAST of Gvermi8019.t1 vs. uniprot
Match: M2XF24_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XF24_GALSU)

HSP 1 Score: 293 bits (750), Expect = 8.700e-93
Identity = 148/287 (51.57%), Postives = 192/287 (66.90%), Query Frame = 0
Query:  106 PSAPDAKLTSLLRDSNAALADVPADILSAYREGLIPLSAISNFFSARANILSRALMGAGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTKASTGKGLSSWISNLSKTLPSNIFQTDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSLIFIREKLDKTYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIFPRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQK 392
            P  PD  L +L+     +   +  ++  A+ +G I    + N+  ARAN +SR LM    G+RNRFLAD+ FLLKILIEE +G+ GKLSAE+E+RR  FW E +FVFAN++ A LADFALVY PAP++SL+ +      SSWI+N +K LP ++FQ    +TL QR   +  K  QL + G  C F GV LTNS+I IR+ LD ++  + Q  N +  S  Y +FLG S+GTRYQLVNG+E HIFPRIF S P+  E  +TFLLR+GNTFWGSQQWVMF +FT VQK
Sbjct:  109 PGRPDGTLLALMTKHGLSWESISTEVRQAFEQGRIGEDVVRNYILARANPVSRLLMSLSQGLRNRFLADERFLLKILIEESLGLCGKLSAEWERRRDRFWKEIDFVFANVIMAFLADFALVYFPAPAISLSGSHISH--SSWIANFAKDLPGSVFQVGHRYTLGQRMISYFYKVGQLSMTGFCCSFIGVALTNSIIMIRKALDPSFTPENQMSNVLTTSAAYGLFLGVSAGTRYQLVNGIEQHIFPRIFSSTPKA-ESIATFLLRWGNTFWGSQQWVMFAKFTGVQK 392          
BLAST of Gvermi8019.t1 vs. uniprot
Match: A0A7J7IQ73_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQ73_9RHOD)

HSP 1 Score: 284 bits (727), Expect = 5.190e-91
Identity = 145/272 (53.31%), Postives = 194/272 (71.32%), Query Frame = 0
Query:  126 DVPADILSAYREGLIPLSAISNFFSARANILSRALMG-AGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTK-ASTGKG---LSSWISNLSKTLPSNIFQTDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSLIFIREKLDKTYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIFPRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQK 392
            D+P D+  A+++G++  + I N+  A +N +SR LM    SGMR RFLAD LFL KILIEEG+GI GKLSAEYE RR  F++E +FVFAN++ ALLADFALVY PAPSV L   A+T      L + +S  ++ +PSNIFQ DRP+T+ QR A +  K SQLFV G AC   GV +TN+LI +R+ LD  +  +  K + +  SV+Y +FLG SS TRYQLVNG+E H+FPRI  +AP++VE  +T++LR+GNTFWGSQQW ++ +FT  Q+
Sbjct:    5 DIPFDVRDAFQKGIVSAAVIKNYIYANSNPVSRFLMNRTTSGMRERFLADNLFLTKILIEEGLGICGKLSAEYEVRRSRFFDEIDFVFANVLMALLADFALVYFPAPSVKLNPTAATSSAFGPLGARVSRFTQGMPSNIFQVDRPYTMQQRVACYLFKVSQLFVTGTACAAIGVSITNTLISVRQMLDPQFAPQNPKSDVLFTSVMYGLFLGISSSTRYQLVNGIEIHLFPRILGNAPRIVEAFATYILRWGNTFWGSQQWALWAKFTGAQR 276          
BLAST of Gvermi8019.t1 vs. uniprot
Match: M1V587_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V587_CYAM1)

HSP 1 Score: 287 bits (735), Expect = 4.580e-90
Identity = 150/285 (52.63%), Postives = 196/285 (68.77%), Query Frame = 0
Query:  113 LTSLLRDSNAALADVPADILSAYREGLIPLSAISNFFSARANILSRALMGAGS-GMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTKA----STGKGLSSWISNLSKTLPSNIFQTDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSLIFIREKLDKTYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIFPRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQK 392
            LT  +   +    D+P D+  A+++G+I  + I N+  A +N +SR LM   S GMR RFLAD LFL KILIEEG+G+ GKLSAEYE RR  F++E +FVFAN++ ALLADFALVY PAPSV L  A    S    +   +SN +  +PSNIFQ DRP+TL QR A +  KA+QLFV G AC   GV +TN L+ +R+ LD  +V +  K N +  S++Y +FLG SS TRYQLVNG+E HIFP+I  ++P+ VE  +T+LLR+GNTFWGSQQW ++ RFT  QK
Sbjct:  150 LTRFMESRSFTWNDIPNDVREAFQKGIISAAVIKNYIYAASNPVSRFLMNRTSRGMRERFLADNLFLTKILIEEGLGLCGKLSAEYEVRRDRFFDELDFVFANVLMALLADFALVYFPAPSVKLNPAMATSSPFGSVGRIVSNYTNGMPSNIFQVDRPYTLQQRIACYLFKATQLFVTGTACAAIGVSVTNVLLSVRQMLDPEFVPQNPKSNVLFTSIMYGLFLGLSSSTRYQLVNGIEIHIFPKILGNSPRFVEGVATYLLRWGNTFWGSQQWALWARFTGAQK 434          
BLAST of Gvermi8019.t1 vs. uniprot
Match: A0A7S2ZQ62_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQ62_9RHOD)

HSP 1 Score: 248 bits (632), Expect = 1.490e-75
Identity = 133/288 (46.18%), Postives = 175/288 (60.76%), Query Frame = 0
Query:  106 PSAPDAKLTS-LLRDSNAALADVPADILSAYREGLIPLSAISNFFSARANILSRALMGAGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTKASTGKGLSSWISNLSKTLPSNIFQTDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSLIFIREKLDKTYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIFPRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQK 392
            PS  D ++    +  S A +  V   + SA++ G I   A+ N+     N   +  +       +R +AD LF+ K+ +EEG+GIFGKLSAE EQRR +F  E +FV  NL+TA L DF LVYLPAPSV L     G+G  +W   +++ LPS+IF  D   TLAQR  GF    ++LF VG ACCFT  ++TN +IF R KLD ++  +   QNP  VS +YA FL  SS TRYQ+VNG+E H  P +F   P +  EA+T  LR+GNTFWGSQQWV+F   T VQK
Sbjct:   80 PSGSDREMVMRFMESSGATVEQVDPKVWSAFQAGNISGLAVVNYLKCVLNPAKKLFLRLLPFTLSRVMADNLFIFKVGVEEGLGIFGKLSAEAEQRRGSFLKEIDFVLCNLLTAFLVDFGLVYLPAPSVKLR----GEGAENWFRMMNRILPSSIFVKDPSVTLAQRFQGFFWTGAKLFGVGFACCFTSAVITNLIIFSRTKLDPSFTPENAMQNPFSVSAMYATFLALSSNTRYQIVNGIEQHFLPVLFGRLPPIATEAATLGLRFGNTFWGSQQWVIFATLTGVQK 363          
BLAST of Gvermi8019.t1 vs. uniprot
Match: A0A5J4YY16_PORPP (Protein RETICULATA-RELATED 4, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY16_PORPP)

HSP 1 Score: 213 bits (541), Expect = 1.070e-61
Identity = 121/290 (41.72%), Postives = 164/290 (56.55%), Query Frame = 0
Query:  113 LTSLLRDSNAALADVPADILSAYREGLIPLSAISNFFSARANILSRALMG-AGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTKASTGK-GLSSWISNLSKTLPSNIFQTDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSLIFIREKLDK--------TYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIFPRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQK 392
            L    R+S     DV  D+  AY +G +P   + N    + N  S+  +   G  MR RFLAD LFL KI+IE+ IG+ GKL AE + R   FWNE +FV AN+V ALLADF L Y PAP+V L+ +     G         KTLPS++FQT+ P+T+ QR + +  K+ QLFVVG+ C   G  L+  +  +  K+ K        T  +          + +Y +FLG SS TRYQLV+G+E H+FPR+F SA  +VE A +F LR+GNT  GS  WV + + T  QK
Sbjct:   97 LNKFFRESGKGWDDVSPDVKHAYEQGQLPSVVVRNDLWLQMNPASKFFVRLGGDAMRARFLADGLFLNKIIIEQAIGLVGKLVAESKGRGEAFWNELDFVGANVVMALLADFGLTYFPAPAVQLSSSKQASAGFIQKALEYGKTLPSSVFQTELPYTMGQRVSTYAFKSVQLFVVGVCCAAIGTALSQFVTLVNSKVSKRNHPAAPVTAAAGKAGAKIAYTAAMYGLFLGLSSNTRYQLVSGIEMHVFPRLFHSAHPLVETAGSFALRFGNTVIGSLNWVWWGKITGAQK 386          
BLAST of Gvermi8019.t1 vs. uniprot
Match: RER4_ARATH (Protein RETICULATA-RELATED 4, chloroplastic n=5 Tax=Camelineae TaxID=980083 RepID=RER4_ARATH)

HSP 1 Score: 177 bits (449), Expect = 3.520e-48
Identity = 111/282 (39.36%), Postives = 153/282 (54.26%), Query Frame = 0
Query:  116 LLRDSNAALADVPADILSAYREGLIPLSAISNFFSARANILSRALMGAGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTK--ASTGKGLSSWISNLSKTLPSNIFQ---TDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSLIFIREKLDKTYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIFPRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQK 392
            LL++S   L  +P D+ +A   G IP S I+ F   + + + R LM  G G R R LAD LF+ K+ +E G+GIF K +AEYE+RR NF+NE E VFA++  A++ADF LVYLPAP+VSL    A T  G+S +  N     P N FQ   +   +TL QR    T   ++LF VG      G  +TN+ I  R+ +D+    + +    V  SV Y V++  SS  RYQ+V GV             ++   A  F +R GNTF GS  WV + R   +QK
Sbjct:  108 LLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFG-GFRERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNC----PDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQK 384          
BLAST of Gvermi8019.t1 vs. uniprot
Match: A0A565CKU1_9BRAS (Uncharacterized protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CKU1_9BRAS)

HSP 1 Score: 177 bits (448), Expect = 3.980e-48
Identity = 111/282 (39.36%), Postives = 154/282 (54.61%), Query Frame = 0
Query:  116 LLRDSNAALADVPADILSAYREGLIPLSAISNFFSARANILSRALMGAGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTK--ASTGKGLSSWISNLSKTLPSNIFQ---TDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSLIFIREKLDKTYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIFPRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQK 392
            LL +S   L  +P D+ +A   G IP S I+ F   +++ + R LM   +G R R LAD LFL K+ +E G+G+F K +AEYE+RR NF+NE E VFA++V A++ADF LVYLPAP+VSL    A T  G+S +  N     P N FQ   +   +TL QR        ++LF VG      G  +TN+ I  R  +DKT   + +    V  S+ Y V++  SS  RYQ++ GV             ++V  A  F +R GNTF GS  WV + R   +QK
Sbjct:   99 LLAESGTGLDTLPKDLAAAIESGRIPGSVITRFLELQSSAVMRWLMQF-AGFRERLLADDLFLAKLAMECGVGVFTKTAAEYERRRENFFNELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNC----PDNAFQIAISGTSYTLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNAFIKARGAVDKTAEGEIETVPIVSTSIAYGVYMAVSSNLRYQVLAGVIEQRLLEPLLHQHKLVLSALCFAVRTGNTFLGSLLWVDYARLIGIQK 375          
BLAST of Gvermi8019.t1 vs. uniprot
Match: UPI0011D19285 (protein RETICULATA-RELATED 4, chloroplastic-like n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D19285)

HSP 1 Score: 172 bits (437), Expect = 2.070e-47
Identity = 108/280 (38.57%), Postives = 153/280 (54.64%), Query Frame = 0
Query:  116 LLRDSNAALADVPADILSAYREGLIPLSAISNFFSARANILSRALMGAGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQRRHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTKA-STGKGLSSWISNLSKTLPSNIFQ---TDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSLIFIREKLDKTYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIFPRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQ 391
            +L ++   L  +P D+ +A   G IP S +S FF    +   R LM  G G + R LAD LFL K+ +E G+GIF K +AEYE+RR NF+NE E VFA++V A++ADF LVYLPAP+VSL  A + G G    I+      P N FQ   +   +++ QR        ++LF VG A    G  +TN+LI  R+ +DK+   + +    +  S  Y V++  SS  RYQ++ GV             +V+  A  F +R GNTF GS  WV + RF  +Q
Sbjct:   21 VLAEAGRQLESLPKDLAAAVEAGRIPGSVVSRFFELERSPFFRWLMQFG-GFKERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFFNELEIVFADVVMAIIADFMLVYLPAPTVSLRPALAIGAGP---ITKFFHNCPDNAFQVALSGTSYSMLQRLGAIVRNGAKLFAVGTASSLVGTAVTNALINARKAVDKSAADEIENVPILSTSAAYGVYMAVSSNLRYQVLAGVIEQRLLEPMLHQHKVMLSALCFAVRTGNTFLGSLLWVDYARFIGIQ 296          
The following BLAST results are available for this feature:
BLAST of Gvermi8019.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHJ0_9FLOR1.530e-19172.64Protein RETICULATA-RELATED 4, chloroplastic n=1 Ta... [more]
A0A1X6P946_PORUM6.080e-9355.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2XF24_GALSU8.700e-9351.57Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7J7IQ73_9RHOD5.190e-9153.31Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1V587_CYAM14.580e-9052.63Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7S2ZQ62_9RHOD1.490e-7546.18Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YY16_PORPP1.070e-6141.72Protein RETICULATA-RELATED 4, chloroplastic n=1 Ta... [more]
RER4_ARATH3.520e-4839.36Protein RETICULATA-RELATED 4, chloroplastic n=5 Ta... [more]
A0A565CKU1_9BRAS3.980e-4839.36Uncharacterized protein n=1 Tax=Arabis nemorensis ... [more]
UPI0011D192852.070e-4738.57protein RETICULATA-RELATED 4, chloroplastic-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021825Protein RETICULATA-relatedPFAMPF11891RETICULATA-likecoord: 169..345
e-value: 2.7E-47
score: 160.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..112
NoneNo IPR availablePANTHERPTHR31620PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATEDcoord: 85..394
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 231..281
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 304..395
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 282..303
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..230
NoneNo IPR availableTMHMMTMhelixcoord: 281..303
NoneNo IPR availableTMHMMTMhelixcoord: 210..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:673135..674322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8019.t1Gvermi8019.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 673135..674322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8019.t1 ID=Gvermi8019.t1|Name=Gvermi8019.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=396bp
MEKHTAFVARFPFSAARPASNPSPVSCTRYAPRIARSAPRAHTLCALTPI
ESGAADFDFLPIATVAIYDFHAEDDSTAQPAYEGGSVPPSGSSSGSGSGG
SDDDSPSAPDAKLTSLLRDSNAALADVPADILSAYREGLIPLSAISNFFS
ARANILSRALMGAGSGMRNRFLADKLFLLKILIEEGIGIFGKLSAEYEQR
RHNFWNEKEFVFANLVTALLADFALVYLPAPSVSLTKASTGKGLSSWISN
LSKTLPSNIFQTDRPFTLAQRAAGFTLKASQLFVVGMACCFTGVILTNSL
IFIREKLDKTYVSKTQKQNPVLVSVLYAVFLGASSGTRYQLVNGVENHIF
PRIFRSAPQVVEEASTFLLRYGNTFWGSQQWVMFCRFTNVQKVKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021825RETICULATA-related