Gvermi8016.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8016.t1
Unique NameGvermi8016.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length210
Homology
BLAST of Gvermi8016.t1 vs. uniprot
Match: A0A2V3IHJ3_9FLOR (Mitochondrial inner membrane protease subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHJ3_9FLOR)

HSP 1 Score: 352 bits (904), Expect = 6.380e-122
Identity = 161/209 (77.03%), Postives = 188/209 (89.95%), Query Frame = 0
Query:    1 MNLMPEQRDSERNQTKEASKPLEIEKKPWFRRVLEDDQFDDLRTFTLAFLVALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLSRFVRPPHDNDIVVFEPPLALQERGYKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKESPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPARFGTTFF 209
            MN+ PEQ++ +  + K+ +  ++  KKPW++R+ EDDQFDD+RTFT AFLVALFVRSTM+EPRYIPSLSMYPTF++GDQFLVDKLSR VRPPH+NDIVVFEPP  L+ERGYKKSDAFIKR+VA GGDRV+IH+G VEVNG+ R+E F+ E+PNYEWGPGTVP+G+VMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPP RFGTTFF
Sbjct:    1 MNIFPEQQEQQDLELKD-NPSVQEPKKPWYKRLFEDDQFDDVRTFTFAFLVALFVRSTMVEPRYIPSLSMYPTFEVGDQFLVDKLSRIVRPPHENDIVVFEPPTVLRERGYKKSDAFIKRVVAVGGDRVYIHNGRVEVNGIPREENFVNENPNYEWGPGTVPEGYVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGTTFF 208          
BLAST of Gvermi8016.t1 vs. uniprot
Match: R7Q6Y8_CHOCR (Mitochondrial inner membrane protease subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6Y8_CHOCR)

HSP 1 Score: 295 bits (756), Expect = 1.260e-98
Identity = 137/181 (75.69%), Postives = 154/181 (85.08%), Query Frame = 0
Query:   29 WFRRVLEDDQFDDLRTFTLAFLVALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLSRFVRPPHDNDIVVFEPPLALQERGYKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKESPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPARFGTTFF 209
            WF RVL DDQFDDLRTFT+AF VAL VR  ++EPRYIPSLSM+PTFDIGDQFLVDK+S++VR     D+VVFEPP AL+ERGY+K DAFIKRIVARGGD V I  G V VN + R+E FIKE PNYEWGPG VP GFVMVLGDNRNNSYDSH+WGFLPE NIIG+A+VRYWPPAR GT+F+
Sbjct:   78 WFSRVLNDDQFDDLRTFTMAFAVALLVRGFVVEPRYIPSLSMFPTFDIGDQFLVDKVSKYVRSAETGDVVVFEPPQALKERGYRKKDAFIKRIVARGGDIVRITGGEVYVNDLRREEPFIKEHPNYEWGPGEVPAGFVMVLGDNRNNSYDSHIWGFLPEENIIGKAMVRYWPPARVGTSFY 258          
BLAST of Gvermi8016.t1 vs. uniprot
Match: A0A5J4YQ87_PORPP (Mitochondrial inner membrane protease subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQ87_PORPP)

HSP 1 Score: 244 bits (624), Expect = 1.770e-77
Identity = 116/181 (64.09%), Postives = 140/181 (77.35%), Query Frame = 0
Query:   26 KKPWF-RRVLEDDQFDDLRTFTLAFLVALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLSRFVRPPHDNDIVVFEPPLALQERGYKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKESPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPARFG 205
            K P F +++L+D +FDDLRTF  +FLVAL  R  + EPRYIPSLSM+PTF++GDQ  V+K+SR VRP    DIVVFEPP AL + GYKKSDAFIKRIVA  GD V +HDG + +NG A+ E +I E P YEWGP  VP+G VMVLGDNRNNS+DSH+WGFLP  N+IGRA++ YWP  RFG
Sbjct:  156 KSPSFLQQLLKDPKFDDLRTFGASFLVALMFRQFVAEPRYIPSLSMFPTFEVGDQLAVEKVSRLVRPLQRGDIVVFEPPTALTDNGYKKSDAFIKRIVAVAGDFVQVHDGTLFINGQAQDESYINEHPRYEWGPTAVPEGQVMVLGDNRNNSFDSHLWGFLPIKNVIGRAVLTYWPLDRFG 336          
BLAST of Gvermi8016.t1 vs. uniprot
Match: M1UNG9_CYAM1 (Mitochondrial inner membrane protease subunit n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UNG9_CYAM1)

HSP 1 Score: 220 bits (560), Expect = 7.200e-68
Identity = 108/196 (55.10%), Postives = 136/196 (69.39%), Query Frame = 0
Query:   29 WFRRVLEDDQFDDLRTFTLAFLVALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLS-RFVRPPHDNDIVVFEPPLALQERG-----------------YKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKESPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPARFGT 206
            W++R+  DD+F D+R FT +FL A+F+R+ ++EPRYIPSLSMYPTFD+GDQ LVDK++ +  R     D+VVF PP AL E                   Y   DA IKR+VA GGD V I DG + VNG A+ E +I ESP+Y+WGP  VPDG+++VLGDNR+NS DSHVWGFLPE N+IGRA+ RYWP  R GT
Sbjct:  138 WWQRLWRDDKFADVRVFTASFLAAVFIRAFVVEPRYIPSLSMYPTFDVGDQLLVDKVTLKLGRHIQRGDVVVFYPPPALIEASKETAKALNAAGETGAHQYGARDAMIKRVVALGGDVVEIRDGRLYVNGEAQIETYIAESPDYQWGPVQVPDGYLVVLGDNRSNSLDSHVWGFLPERNVIGRAVFRYWPLTRVGT 333          
BLAST of Gvermi8016.t1 vs. uniprot
Match: A0A4Y7KUF9_PAPSO (Peptidase_S26 domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7KUF9_PAPSO)

HSP 1 Score: 216 bits (551), Expect = 1.380e-66
Identity = 101/168 (60.12%), Postives = 125/168 (74.40%), Query Frame = 0
Query:   40 DDLRTFTLAFLVALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLSRFVRPPHDNDIVVFEPPLALQERGYKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKESPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPARFGTT 207
            DD +T   AF V+L  RS + EPR+IPSLSMYPTFD+GD+ + +K+S + R P  ND+V+F+ P  LQ+ GY  SD FIKRIVA+ GD V +HDG + VNGVAR E+FI E P+Y+  P TVP+  V V+GDNRNNSYDSHVWG LPE NIIGR++ RYWPP R G T
Sbjct:  123 DDAKTVFAAFAVSLAFRSFIAEPRFIPSLSMYPTFDVGDRLVAEKVSYYFRKPCPNDVVIFKSPPVLQQVGYTDSDVFIKRIVAKEGDVVEVHDGKLIVNGVARDEEFILEPPSYDMSPVTVPENSVFVMGDNRNNSYDSHVWGPLPEKNIIGRSVFRYWPPTRIGGT 290          
BLAST of Gvermi8016.t1 vs. uniprot
Match: A0A251V6G0_HELAN (Putative peptidase S26A, signal peptidase I n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251V6G0_HELAN)

HSP 1 Score: 214 bits (544), Expect = 3.780e-66
Identity = 97/172 (56.40%), Postives = 125/172 (72.67%), Query Frame = 0
Query:   36 DDQFDDLRTFTLAFLVALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLSRFVRPPHDNDIVVFEPPLALQERGYKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKESPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPARFGTT 207
            D   DD++T  +A  V+L  R+ + EPR+IPSLSMYPTFD+GD+ + +K+S + R P  NDIV+F+ P  LQ+ GY   D FIKRIVA+ GD V +H+G + VNGV R E F  E+P YE  P  VP+ +V V+GDNRNNSYDSHVWG LP  NIIGR+++RYWPPAR G+T
Sbjct:   81 DFSLDDVKTVVVAVAVSLAFRAFIAEPRFIPSLSMYPTFDVGDRIVAEKVSYYFRKPCPNDIVIFKSPPVLQKAGYTDDDVFIKRIVAKAGDVVEVHNGKLIVNGVVRNEDFTYEAPKYEMNPVRVPENYVFVMGDNRNNSYDSHVWGSLPSKNIIGRSVLRYWPPARIGST 252          
BLAST of Gvermi8016.t1 vs. uniprot
Match: A0A2G5FAQ4_AQUCA (Peptidase_S26 domain-containing protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5FAQ4_AQUCA)

HSP 1 Score: 214 bits (546), Expect = 8.760e-66
Identity = 101/168 (60.12%), Postives = 123/168 (73.21%), Query Frame = 0
Query:   40 DDLRTFTLAFLVALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLSRFVRPPHDNDIVVFEPPLALQERGYKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKESPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPARFGTT 207
            DD +T   AF V+L  RS + EPRYIPSLSMYPTF++GD+ + +K+S + R P  NDIV+F+ P  LQE GY   D FIKRIVA+ GD V +HDG + VNGVAR E FI ESP+Y+  P  VP+ FV V+GDNRNNSYDSH+WG LP  NIIGR++ RYWPP R G T
Sbjct:  133 DDAKTVFAAFAVSLAFRSFIAEPRYIPSLSMYPTFNVGDRLVAEKVSYYFRKPCPNDIVIFKSPPVLQEVGYTDEDVFIKRIVAKEGDTVEVHDGKLIVNGVARDENFILESPSYDMTPVRVPENFVFVMGDNRNNSYDSHIWGPLPAKNIIGRSVFRYWPPNRIGGT 300          
BLAST of Gvermi8016.t1 vs. uniprot
Match: A0A200PP70_9MAGN (Peptidase S26A n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PP70_9MAGN)

HSP 1 Score: 214 bits (546), Expect = 8.760e-66
Identity = 99/170 (58.24%), Postives = 126/170 (74.12%), Query Frame = 0
Query:   40 DDLRTFTLAFLVALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLSRFVRPPHDNDIVVFEPPLALQERGYKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKESPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPARFGTTFF 209
            DD +T   AF V+L  RS + EPR+IPSLSMYPTFD+GD+ + +K+S + R P  NDIV+F+ P  LQE GY  +D FIKRIVA+ GD V +HDG + VNGVAR E+++ E P+Y+  P  VP+  V V+GDNRNNSYDSH+WG LP  NIIGR++ RYWPPAR G+T F
Sbjct:  123 DDAKTVFAAFAVSLAFRSFVAEPRFIPSLSMYPTFDVGDRIVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDNDVFIKRIVAKAGDVVEVHDGKLMVNGVARNEEYVLEPPSYDMTPVHVPENSVFVMGDNRNNSYDSHIWGPLPAKNIIGRSVFRYWPPARIGSTIF 292          
BLAST of Gvermi8016.t1 vs. uniprot
Match: UPI000A67577B (Signal peptidase I n=1 Tax=Cyanobacteria bacterium SBC TaxID=2821503 RepID=UPI000A67577B)

HSP 1 Score: 209 bits (533), Expect = 1.220e-65
Identity = 92/171 (53.80%), Postives = 123/171 (71.93%), Query Frame = 0
Query:   37 DQFDDLRTFTLAFLVALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLSRFVRPPHDNDIVVFEPPLALQERGYKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKESPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPARFGTT 207
            D  +++R F +A ++AL +R+ + EPRYIPS SM+PT ++GD+ +V+K+S +  PP   DI+VF PP  LQ +GY+   AFIKR++AR GD V ++DG V VNG   +E +I E P Y WGP TVP G + V+GDNRNNS DSHVWGFLPE N IGRA  R+WP +R G+T
Sbjct:   20 DHGENIRIFAVALVLALLLRTFIAEPRYIPSESMFPTLELGDRLIVEKISYYFHPPEPGDIIVFSPPPQLQRQGYRADQAFIKRVIARSGDTVAVNDGQVYVNGQPLRENYIAEVPEYAWGPATVPPGSIFVMGDNRNNSNDSHVWGFLPEENTIGRAWFRFWPLSRLGST 190          
BLAST of Gvermi8016.t1 vs. uniprot
Match: UPI001CB8A802 (chloroplast processing peptidase isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8A802)

HSP 1 Score: 213 bits (541), Expect = 1.960e-65
Identity = 104/183 (56.83%), Postives = 125/183 (68.31%), Query Frame = 0
Query:   25 EKKPWFRRVLEDDQFDDLRTFTLAFLVALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLSRFVRPPHDNDIVVFEPPLALQERGYKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKESPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPARFGTT 207
            EKK  F     D   DD +T   A  V+L  R  + EPR+IPSLSMYPTFD+GD+ + +K+S + R P  NDIV+F+ P  LQE GY   D FIKR+VA+ GD V +HDG + VNGVAR E F  E+P YE  P  VPD +V V+GDNRNNSYDSHVWG LP  NIIGR++ RYWPPAR G T
Sbjct:   90 EKKDGFLPDWVDFTSDDAKTVFAALAVSLAFRMFIAEPRFIPSLSMYPTFDVGDRLVAEKVSYYFREPCPNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKAGDLVEVHDGKLIVNGVARNEDFTNEAPKYEMTPVRVPDKYVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPARIGGT 272          
The following BLAST results are available for this feature:
BLAST of Gvermi8016.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHJ3_9FLOR6.380e-12277.03Mitochondrial inner membrane protease subunit n=1 ... [more]
R7Q6Y8_CHOCR1.260e-9875.69Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A5J4YQ87_PORPP1.770e-7764.09Mitochondrial inner membrane protease subunit n=1 ... [more]
M1UNG9_CYAM17.200e-6855.10Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A4Y7KUF9_PAPSO1.380e-6660.12Peptidase_S26 domain-containing protein n=2 Tax=Pa... [more]
A0A251V6G0_HELAN3.780e-6656.40Putative peptidase S26A, signal peptidase I n=1 Ta... [more]
A0A2G5FAQ4_AQUCA8.760e-6660.12Peptidase_S26 domain-containing protein n=1 Tax=Aq... [more]
A0A200PP70_9MAGN8.760e-6658.24Peptidase S26A n=1 Tax=Macleaya cordata TaxID=5685... [more]
UPI000A67577B1.220e-6553.80Signal peptidase I n=1 Tax=Cyanobacteria bacterium... [more]
UPI001CB8A8021.960e-6556.83chloroplast processing peptidase isoform X1 n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 58..74
score: 39.22
coord: 117..129
score: 47.8
coord: 161..180
score: 55.6
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 44..200
e-value: 5.9E-36
score: 121.7
IPR000223Peptidase S26A, signal peptidase IPANTHERPTHR43390SIGNAL PEPTIDASE Icoord: 7..205
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 54..207
e-value: 6.0E-33
score: 115.5
NoneNo IPR availablePANTHERPTHR43390:SF2THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATEDcoord: 7..205
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..60
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 43..199
e-value: 2.0E-39
score: 135.3
IPR019533Peptidase S26CDDcd06530S26_SPase_Icoord: 61..194
e-value: 2.61911E-23
score: 87.2559
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 166..179
IPR019756Peptidase S26A, signal peptidase I, serine active sitePROSITEPS00501SPASE_I_1coord: 67..74
IPR019757Peptidase S26A, signal peptidase I, lysine active sitePROSITEPS00760SPASE_I_2coord: 119..131
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 56..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:670478..671107 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8016.t1Gvermi8016.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 670478..671107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8016.t1 ID=Gvermi8016.t1|Name=Gvermi8016.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=210bp
MNLMPEQRDSERNQTKEASKPLEIEKKPWFRRVLEDDQFDDLRTFTLAFL
VALFVRSTMIEPRYIPSLSMYPTFDIGDQFLVDKLSRFVRPPHDNDIVVF
EPPLALQERGYKKSDAFIKRIVARGGDRVHIHDGLVEVNGVARKEQFIKE
SPNYEWGPGTVPDGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWP
PARFGTTFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR019533Peptidase_S26
IPR019758Pept_S26A_signal_pept_1_CS
IPR019756Pept_S26A_signal_pept_1_Ser-AS
IPR019757Pept_S26A_signal_pept_1_Lys-AS
IPR036286LexA/Signal_pep-like_sf