Gvermi8013.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8013.t1
Unique NameGvermi8013.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length387
Homology
BLAST of Gvermi8013.t1 vs. uniprot
Match: A0A2V3IK85_9FLOR (E3 ubiquitin-protein ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK85_9FLOR)

HSP 1 Score: 556 bits (1434), Expect = 1.060e-196
Identity = 291/405 (71.85%), Postives = 311/405 (76.79%), Query Frame = 0
Query:    1 MPPSTPRRRSGIFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNICQRRAGMDSLRHHRNGLSSSELDMYADDPAXXXXXXXXVSNDVVVHVMPHHPPSA-DPDTSPLLHHDPSYD------------------HPAHTSASPHIATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNIVSSQFVDRFIRIVNLWYLAWFIVGSIWVSDGGTCATEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHTGSENLDDASCVICLCDYEDGEVVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASSPV 386
            MPPS PRRRSGIFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCEL AEFAVL WSRG TC  PLRFWL +LI+LQ+TTVLLNCLNICQRRAGM+S R HRNGLS++++DMYAD P+         SNDV+V VM     +A + D  PLL H+   D                  HP H   SPH +T                               +VS QFVD FIR+VNLWYLAWFI+GSIWVSDGGTC+TEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFIL+YRIMLPYAERERRRARAADPAQVQNL+SITFS ETF  HTGSENLDDASCVICLCDYEDGE VRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASS V
Sbjct:    1 MPPSAPRRRSGIFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELFAEFAVLVWSRGHTCDRPLRFWLAILIMLQVTTVLLNCLNICQRRAGMESFRLHRNGLSATDIDMYADTPSAPSTSSP-ASNDVIVQVMHQQSAAASENDRMPLLDHELQQDQSTHMVLQQLHHQSQPQSHPNHPXQSPHSSTPPSSQREFPHYQQLSESSRA-----------LVSPQFVDGFIRLVNLWYLAWFILGSIWVSDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILIYRIMLPYAERERRRARAADPAQVQNLSSITFSAETFLTHTGSENLDDASCVICLCDYEDGETVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASSLV 393          
BLAST of Gvermi8013.t1 vs. uniprot
Match: R7Q7W7_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7W7_CHOCR)

HSP 1 Score: 310 bits (794), Expect = 5.120e-101
Identity = 145/181 (80.11%), Postives = 162/181 (89.50%), Query Frame = 0
Query:  206 SSQFVDRFIRIVNLWYLAWFIVGSIWVSDGGTCATEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHTGSENLDDASCVICLCDYEDGEVVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASSPV 386
            S++  DR++RIVN WYL WFI+GS WVSDGGTC+T APHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAER+RRR RAADPAQVQNLNSI +SP TF    G+++L+DASCVICLC+YE+GE VRFLPCKHHFH+DCVDVWLRLDKACCLCKQDIDA  + P + PV
Sbjct:  118 STELFDRYVRIVNAWYLVWFILGSFWVSDGGTCSTTAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERDRRRPRAADPAQVQNLNSIEYSPATFANLAGNDSLEDASCVICLCEYEEGETVRFLPCKHHFHQDCVDVWLRLDKACCLCKQDIDAQ-TQPLTPPV 297          
BLAST of Gvermi8013.t1 vs. uniprot
Match: M2XIL2_GALSU (Zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XIL2_GALSU)

HSP 1 Score: 247 bits (631), Expect = 1.680e-75
Identity = 153/374 (40.91%), Postives = 206/374 (55.08%), Query Frame = 0
Query:   12 IFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNICQRR--AGMDSLRH-----HRNGLSSSELDMYADDPAXXXXXXXXVSNDVVVHVMPHHPPSADPDTSPLLHHDPSYDHPAHTSASPHIATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNIVSSQFVDRFIRIVNLWYLAWFIVGSIWVSDGGTCATEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAER-ERRRARAADPAQVQNLNSITFSPETFTAHTGSENLDDASCVICLCDYEDGEVVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAH 377
            +   ESTR+R+NV D+ QRDLLPAGR+L+V LV  EL AE  VL +S  ++C  PL FW+ VLI +QL +++LN +     R  A ++SL       H  G SSS +   A++                            P  S  +    S +   +T                                      ++  ++ V R++R++N +YL WFIVGSIW+S+  TC   APHLYRL++AL +IYYALL LPLACFCLI+CCLPLFI   R++LPYAE  +RRR RAA   Q+ NL   ++       H   E  +D SCVICL DY DG+++R LPCKHH+HK C+D WL LDK+C LCK+DID+ 
Sbjct:   59 LLRQESTRVRNNVVDRFQRDLLPAGRLLTVLLVTSELTAELLVLIFSWNKSCDRPLHFWICVLIFIQLFSLVLNLVGSRYSRVFASLESLSQEEGTRHETG-SSSGVFFRAENIYRGF-----------------------PSGSSEIEETESLEESGNTIFE-----------------------------------SMYHNELVSRWLRLLNAFYLVWFIVGSIWLSECETCNKTAPHLYRLVLALIVIYYALLGLPLACFCLIMCCLPLFI---RLLLPYAESTQRRRGRAATAEQINNLPCSSY------VHGSFEREEDTSCVICLTDYIDGDMIRHLPCKHHYHKKCIDEWLALDKSCPLCKKDIDSR 364          
BLAST of Gvermi8013.t1 vs. uniprot
Match: A0A1X6NVI3_PORUM (RING-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVI3_PORUM)

HSP 1 Score: 261 bits (666), Expect = 3.540e-74
Identity = 160/391 (40.92%), Postives = 208/391 (53.20%), Query Frame = 0
Query:    4 STPRRRSGIFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNICQRRAGMDSLRHHRNGLSSSELDMYADDPAXXXXXXXXVSNDVVVHVMPHHPPSADPDTSPLLHHDPSYDHPAHTSASPHIATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNIVSSQFVDRFIRIVNLWYLAWFIVGSIWVSDGGTCATEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHTGSENLD------------------DASCVICLCDYEDGEVVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDA 376
            + PR   G  H ESTR+RSNVA+QV+RDL PAG +L++ LV  E++AE  VLA S G  C  PLR WL+VLIVLQL T+ L+ + I   R         RN   +++       PA                       +  P   P+   +P+       +A+                                        + V  ++R +N W+L  F++ S+WVS+GGTCA  APHLYRL VALT+IYYALLFLPLACFCLIVCCLPLFI++YR+ LPYAERE RRAR+AD  Q+  L S  ++P   ++                          +A+CVICLC+Y  GE+V  LPC+HHFHK C+D WL  DK+C LCKQDIDA
Sbjct: 1046 NAPRPAGGFVHRESTRVRSNVAEQVRRDLHPAGLLLTLALVSAEVVAELGVLAISAGAPCDRPLRPWLIVLIVLQLATIALSGIRINSTRV--------RNARLAAQEAAEQATPAGAASTTAGRXXXX----------AGAPPLLPVSAMEPTAGWSRAEAATREAER---------------------------------RDEAVSEYLRQINWWFLVCFVLSSVWVSNGGTCAQTAPHLYRLAVALTVIYYALLFLPLACFCLIVCCLPLFIVLYRLALPYAEREWRRARSADATQLAALPSTPYTPGMLSSAAXXXXXXXXXXXXXXXXXXXXXXXXEATCVICLCEYVAGELVTSLPCRHHFHKKCIDEWLATDKSCPLCKQDIDA 1385          
BLAST of Gvermi8013.t1 vs. uniprot
Match: A0A7S1TI96_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TI96_9RHOD)

HSP 1 Score: 236 bits (601), Expect = 1.400e-69
Identity = 152/356 (42.70%), Postives = 190/356 (53.37%), Query Frame = 0
Query:   19 RLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNICQRRAGMDSLRHHRNGLSSSELDMYADDPAXXXXXXXXVSNDVVVHVMPHHPPSADPDTSPLLHHDPSYDHPAHTSASPHIATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNIVSSQFVDRFIRIVNLWYLAWFIVGSIWVSDGGTCATEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHTGSENLDDASCVICLCDYEDGEVVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDI 374
            R R+NV D VQRDLLPAGR+LS+FLV+CEL+AE  VL  S  + C  PL  W+ +L++LQ+ TV+LN L I   R    S      G +S      AD P          S                P +   L + PS +  A+  +S                                          + R  R++N +YL WFIVGSIWVS+  +CA  APHLYRL +ALTIIYY LL LPLACFCLI+CCLPLFI   RIMLPYAER +RR+RAA P Q+  L   TF  E      G E +++ +CVICL  Y DG+ +R LPCKHHFH  C+D WL   + C LCK+ I
Sbjct:  195 RARTNVVDHVQRDLLPAGRLLSIFLVVCELVAEGTVLTLSWSKPCARPLHLWIEILMLLQIATVVLNALCIVHGRQATLS------GPTSPSRPWDADSPGSGSPLDSPRS----------------PASGLRLLNSPSLESLANNLSS------------------------------------TTEGARLARRQRLLNAFYLIWFIVGSIWVSESSSCAKTAPHLYRLALALTIIYYTLLGLPLACFCLIMCCLPLFI---RIMLPYAERAQRRSRAATPEQIMALPVSTFPIE------GLE-VEEDNCVICLGSYVDGDSIRELPCKHHFHMKCIDQWLACSQQCPLCKKSI 482          
BLAST of Gvermi8013.t1 vs. uniprot
Match: A0A5J4YII6_PORPP (E3 ubiquitin protein ligase RIE1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YII6_PORPP)

HSP 1 Score: 225 bits (574), Expect = 1.210e-66
Identity = 142/366 (38.80%), Postives = 197/366 (53.83%), Query Frame = 0
Query:   16 ESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNICQRRAGMDSLRHHRNGLSSSELDMYADDPAXXXXXXXXVSNDVVVHVMPHHPPS--ADPDTSPLLHHDPSYDHPAHTSASPHIATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNIVSSQFVDRFIRIVNLWYLAWFIVGSIWVSDGGTCATEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHTGSENLDDASCVICLCDYEDGEVVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNS 379
            +  +LRSNVA Q++RDL PA RMLS+FLV  E +AE+ VL     + C   L  W++VL+ +QL +V+L   +    R+ +D +       S +                   ++++ V  +    P+  A    SP L    S+   A       +                                + V+   + R+IRI+N  YLAWF++GSIWVSDG +CA  APHLYRL++ LTIIYY+LL LPL CFCLI+CCLP+FI   R+MLPYAER +RR R A   Q+  L +  F+  +     GSE     SCVICL  Y D E ++ LPC+HHFH  C+D WL +DK+C LCK DID+H++
Sbjct:   68 QPVQLRSNVASQMRRDLTPAARMLSIFLVSFEFVAEYIVLYIDWDKPCDSFLHLWVVVLMAMQLCSVVLGLAS----RSALDRVVLISEDASGAPRSTAPSVVFTAGGMGVATNSNISVGPVDASMPASFASDAQSPELSRATSWSTVAENLYGSDVNPTTS---------------------------SSVNPDLILRWIRILNGLYLAWFLIGSIWVSDGASCAQTAPHLYRLVLVLTIIYYSLLGLPLFCFCLIMCCLPMFI---RLMLPYAERAQRRGRCASAEQIAALPTEAFNATSAPEMFGSEQ----SCVICLSAYADAERLKILPCRHHFHSKCIDEWLCVDKSCPLCKADIDSHDT 395          
BLAST of Gvermi8013.t1 vs. uniprot
Match: A0A7S0BLF4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLF4_9RHOD)

HSP 1 Score: 149 bits (375), Expect = 4.960e-40
Identity = 79/163 (48.47%), Postives = 105/163 (64.42%), Query Frame = 0
Query:  214 IRIVNLWYLAWFIVGSIWVSDGGTCATEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHTGSENLDDASCVICLCDYEDGEVVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDA 376
            +R+VN  YL  F +GS+ V+   +C    P LYRL++ALT+IYY LL LPLACFCL++C LP F     + L  +ER  R++R A   +++ L    F P+ F ++       D SCVICL  YE GE +R LPCKH FH +CVD WL +DK+C LCKQDID+
Sbjct:    1 VRMVNALYLILFGIGSVLVTQARSCMKTDPDLYRLVLALTVIYYGLLGLPLACFCLMLCWLPGFFRFIPVYL--SERCNRQSRMASSKRIEELPRTDFDPDNFDSN------HDVSCVICLNPYERGEKLRTLPCKHDFHSECVDQWLLIDKSCPLCKQDIDS 155          
BLAST of Gvermi8013.t1 vs. uniprot
Match: T0PUV8_SAPDV (RING-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PUV8_SAPDV)

HSP 1 Score: 108 bits (269), Expect = 4.370e-23
Identity = 66/178 (37.08%), Postives = 98/178 (55.06%), Query Frame = 0
Query:  217 VNLWYLAWFIVGSIWV-SDGGTCATEAP-HLYRLIVALTIIYYALLFLPLACFCLI-------VC-CLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHTGSENLDDASCVICLCDYEDGEVVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASS 384
            + L  L WF+VG++WV SD   C+T+   H+Y + +A+ II Y  +FLP    CLI       VC CLP  I +   M     ++  R + A    +  L+S+ ++P  F         +DASC ICL +Y++ + VR L C HHFHK+CVD WL ++  C  C+  ID ++  PA+S
Sbjct:  142 MELMGLFWFLVGNMWVISDEDHCSTQGDGHMYNMALAMIIICYVKIFLP----CLILMALLPVVCFCLPCLIRILNRM-----QDPMRGKGASKEMIAALSSVPYTPHLFPD-------EDASCCICLNEYDESQHVRILHCNHHFHKECVDEWLLVNATCPTCRTSIDPNHVEPAAS 303          
BLAST of Gvermi8013.t1 vs. uniprot
Match: A0A152A2A2_9MYCE (Putative GATA-binding transcription factor n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A2A2_9MYCE)

HSP 1 Score: 105 bits (263), Expect = 1.840e-21
Identity = 60/183 (32.79%), Postives = 95/183 (51.91%), Query Frame = 0
Query:  215 RIVNLWYLAWFIVGSIWV--SDGGTCATEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFIL----VYRIMLPYAER--------ERRRARAADPAQVQNLNSITFSPETFTAHTGSENLDDASCVICLCDYEDGEVVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPAS 383
            +++ L+ ++WF++GSIW+  SD   C  + P+LY  +  L +  +            I   + LF++    + RI+  Y +R             R A  A ++NL    +       H G  + +DASC ICLC+YE  + +R LPCKHHFH  CVD WL ++KAC  CK+D+ +++  P S
Sbjct:  279 KVLLLFLVSWFLIGSIWLLKSDDKQCYAKIPYLYGSVYILLLFEF------------IAMLVSLFVMGMNILLRIIKQYIQRMSPVNPIFPAEEPRGASDAMIRNLKVDRY-------HEGQFSKEDASCAICLCEYELNDRIRILPCKHHFHLSCVDRWLIINKACPFCKRDVASYSDFPKS 442          
BLAST of Gvermi8013.t1 vs. uniprot
Match: UPI000644E744 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E744)

HSP 1 Score: 105 bits (261), Expect = 4.760e-21
Identity = 61/177 (34.46%), Postives = 96/177 (54.24%), Query Frame = 0
Query:  203 NIVSSQFVDRFI-RIVNLWYLAWFIVGSIWV---SDGGTCATEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHTGSENLDDASCVICLCDYEDGEVVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDID 375
            +++  QF+   + R+++ +Y+ WF+VG IW         C + +P+L+ +  ++ II   +L      FC   CC  +F L+   +    E     +R A  A ++ L    F       HTG    DD SC ICLC+Y++ + +R LPC+HHFH DCVD WL ++K+C  CK+DID
Sbjct:  286 SLLRKQFIFNTVHRMLSCFYITWFLVGIIWTFKARSSDKCPSSSPYLFWVTYSV-IITQIILASGAIMFC---CCSCMFSLMR--LGAGVEMAPPESRGATDAMIRKLTIKKF-------HTGLLEKDDCSCAICLCEYDEDDKIRILPCRHHFHLDCVDRWLVINKSCPFCKRDID 449          
The following BLAST results are available for this feature:
BLAST of Gvermi8013.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK85_9FLOR1.060e-19671.85E3 ubiquitin-protein ligase n=1 Tax=Gracilariopsis... [more]
R7Q7W7_CHOCR5.120e-10180.11RING-type domain-containing protein n=1 Tax=Chondr... [more]
M2XIL2_GALSU1.680e-7540.91Zinc finger (C3HC4-type RING finger) family protei... [more]
A0A1X6NVI3_PORUM3.540e-7440.92RING-type domain-containing protein n=1 Tax=Porphy... [more]
A0A7S1TI96_9RHOD1.400e-6942.70Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YII6_PORPP1.210e-6638.80E3 ubiquitin protein ligase RIE1 n=1 Tax=Porphyrid... [more]
A0A7S0BLF4_9RHOD4.960e-4048.47Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
T0PUV8_SAPDV4.370e-2337.08RING-type domain-containing protein n=2 Tax=Saprol... [more]
A0A152A2A2_9MYCE1.840e-2132.79Putative GATA-binding transcription factor n=1 Tax... [more]
UPI000644E7444.760e-2134.46hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 330..370
e-value: 1.7E-4
score: 30.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 329..371
e-value: 1.1E-9
score: 38.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 330..371
score: 10.556635
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 286..377
e-value: 2.7E-18
score: 67.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..192
NoneNo IPR availablePANTHERPTHR46225C3H4 TYPE ZINC FINGER PROTEINcoord: 39..374
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 216..234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 235..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 254..284
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 285..386
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..57
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 323..376
NoneNo IPR availableTMHMMTMhelixcoord: 67..89
NoneNo IPR availableTMHMMTMhelixcoord: 38..57
NoneNo IPR availableTMHMMTMhelixcoord: 216..233
NoneNo IPR availableTMHMMTMhelixcoord: 248..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:665227..666387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8013.t1Gvermi8013.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 665227..666387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8013.t1 ID=Gvermi8013.t1|Name=Gvermi8013.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=387bp
MPPSTPRRRSGIFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELLA
EFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNICQRRAGMDSLR
HHRNGLSSSELDMYADDPAAPPPPPPSVSNDVVVHVMPHHPPSADPDTSP
LLHHDPSYDHPAHTSASPHIATHHPQSPHPPSSPSSSREFAPYHQQPDHA
PYNIVSSQFVDRFIRIVNLWYLAWFIVGSIWVSDGGTCATEAPHLYRLIV
ALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADP
AQVQNLNSITFSPETFTAHTGSENLDDASCVICLCDYEDGEVVRFLPCKH
HFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASSPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD