Gvermi801.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi801.t1
Unique Name	Gvermi801.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	528

Homology

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BLAST of Gvermi801.t1 vs. uniprot
Match: A0A2V3IYC4_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYC4_9FLOR)

HSP 1 Score: 377 bits (968), Expect = 2.740e-123
Identity = 201/422 (47.63%), Postives = 276/422 (65.40%), Query Frame = 0

Query:   90 MPSTTLYMPFEVGNLLTWLWLEVFALGALILWTTDVAHIAMYARLKRSRAIRIRAKRSAVDLLPMNGDLRVLPNAPKLCITLIRAVISILVAVSAMGIEQGVVYTRFEPTTHTISATDANFSGRGYDATLRNSRQDFAVAACEDVNEISLVKFKSFVSPKRFSCEASAHVGERIKEIEVIWDHNIVANISGGEVLPVNIVLGERSAMSKELSNDTFVLLEDSNGAPVHLNVVRRRMSKPIVGVCTGDRTDKQSGFQSGEYLVFSND-IDNVGEIGDELVSVAYAICHKSSPVPLRSTDDMIVLPFNNAQQQMILARQVANSLISIVPDVTQRLHFERTTRVTLVKNKFNYLVLGLAIFNIVLVVICKIGKNYIKQGVHVDPFSPFSMFWLGRHSAVGRSSHDSNATKEFFIHGNNNKRYVEV 510
            M  TTLYM F++GN++ WLWLEV ALG L+LWTT++A I M    K+SR +R+RAK++ +D +P+NGDL  LP APKL IT IRA +SI VA SA+GI+ G  YT  +P+TH +SAT+ NFSGR YD+   +S QDFAV ACEDV   S+VKF + VS   FSC     V ++    EVIWD + V +I+ G+ LPVNI LGE SA+ +E S++  + L +S  APV ++V+RR +     G C  D  D  +G +  EYLVFSN  +++ G + DE+VSVAY IC  SS +PLR+TD M+ LP     QQMILARQVA +L+SI  D ++++ F +T  VT ++  F  L+LGL I N + +V+  I   Y+K+ +HVD  SP SM+WLGR S       +  AT++ FI   +    +E+
Sbjct:    1 MEDTTLYMSFKLGNMVVWLWLEVLALGCLVLWTTNLASIIMVLFFKQSRTLRLRAKKTLIDRIPLNGDLTTLPTAPKLIITFIRAGVSIAVAFSALGIDPGNYYTNSQPSTHLVSATNLNFSGRAYDSAPTDSLQDFAVVACEDVTTTSVVKFMAIVSNSAFSCNFGRDVSDKKAIAEVIWDQDTVRDIAKGQALPVNIKLGENSAVLEEESSERLIRLHNSKEAPVFMSVIRRGVQNSTYGECHDDSNDDTTGQR--EYLVFSNGRVEDAGRVEDEVVSVAYVICKASSVIPLRNTDRMMFLPHITGSQQMILARQVAEALVSITADSSKKVFFGQTRSVTKLEEGFFKLMLGLTIGNTLFLVVSAILLRYVKRDIHVDVLSPVSMYWLGRSSEQRDKQGNKEATEDVFIRAAHTANGIEI 420

The following BLAST results are available for this feature:

BLAST of Gvermi801.t1 vs. uniprot

BLAST of Gvermi801.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IYC4_9FLOR	2.740e-123	47.63	Uncharacterized protein n=2 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 107..132
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 167..187
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 455..527
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 133..166
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 436..454
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 188..435
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 78..106
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..55
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 56..77
None	No IPR available	TMHMM	TMhelix		coord: 56..78
None	No IPR available	TMHMM	TMhelix		coord: 436..453
None	No IPR available	TMHMM	TMhelix		coord: 107..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_2952	contig	ScGOVlb_2952:402888..404471 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi801.t1	Gvermi801.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_2952 402888..404471 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi801.t1 ID=Gvermi801.t1|Name=Gvermi801.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=528bp
MSFPCDDDPFCTAADNDDLICMAADNDALKACSQNPSKSTYLKTYRIASS
LNLRKLCYVSAFVSPPVVFPISITLLLPHNRRGFALPSRMPSTTLYMPFE
VGNLLTWLWLEVFALGALILWTTDVAHIAMYARLKRSRAIRIRAKRSAVD
LLPMNGDLRVLPNAPKLCITLIRAVISILVAVSAMGIEQGVVYTRFEPTT
HTISATDANFSGRGYDATLRNSRQDFAVAACEDVNEISLVKFKSFVSPKR
FSCEASAHVGERIKEIEVIWDHNIVANISGGEVLPVNIVLGERSAMSKEL
SNDTFVLLEDSNGAPVHLNVVRRRMSKPIVGVCTGDRTDKQSGFQSGEYL
VFSNDIDNVGEIGDELVSVAYAICHKSSPVPLRSTDDMIVLPFNNAQQQM
ILARQVANSLISIVPDVTQRLHFERTTRVTLVKNKFNYLVLGLAIFNIVL
VVICKIGKNYIKQGVHVDPFSPFSMFWLGRHSAVGRSSHDSNATKEFFIH
GNNNKRYVEVFAVVSDISLETISIEKT*