Gvermi799.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi799.t1
Unique NameGvermi799.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length413
Homology
BLAST of Gvermi799.t1 vs. uniprot
Match: A0A2V3J400_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J400_9FLOR)

HSP 1 Score: 432 bits (1111), Expect = 7.140e-146
Identity = 216/349 (61.89%), Postives = 259/349 (74.21%), Query Frame = 0
Query:    1 MLSPDVLSFHYPLVDAPAPAVQDAVSRLVPEHYRHLAHDPPFVPPELVPAALRLARDRHRSIAALTAQSDRLLRAAVLDTSHWGYVVARARPFFDSYNAGRAARLIAVHAMQRLCLHVSGSAKPPALDDAHVARLCHSVFSPTPTGHMRPLPKGRTAAGVVLRPATGRFAKRLRADADHMIMLTREPDHESAHLTSTRLRGNYTCAPLAPGRLEYWDNRFVIGAAPVSALQPHDHVPLLHPRRVFEAALQPAANHAQRITDCTLYVRQLRRADWDLITSVSSRARNFQTPFECIRALPAVFQKPAATCEPGELVASPHLGLSARPDLCFVAVRLPRFRCLPADLDPGFT 349
            ML    L+FH PL       +   V   VP  Y   A DP F+PP+L+PAAL+LA  +  S+  L  QSD LLR +VL+TSHWGY+VAR    ++ +N+GRA+RL  +HAMQR+CLHVSGSAKP +LD+  V RLC +VF P+  G MR LPKGRTAAGVVLRPATGRFA+RLR   DH++MLTREPDH++  L STRLRGNY CAPL   +  YWDNRFV+ AAP+S L      P L  +RVFEAAL+P + H Q++ DCTLY+RQLRR+DWDL+TSVS+R R F TPFECIRALP VFQK A +   G+LVASPHLGLSARPDL F+AVRLPRFRCLP D+DPGFT
Sbjct:  133 MLPKGTLTFHEPLSTVDHATICSTVHENVPPEYNRTA-DPTFMPPQLIPAALQLADQKKSSLQLLQHQSDDLLRNSVLETSHWGYIVARTDMLYEKFNSGRASRLAVIHAMQRMCLHVSGSAKPLSLDEPQVNRLCEAVFKPSADGDMRALPKGRTAAGVVLRPATGRFARRLRTGNDHLMMLTREPDHDTPSLFSTRLRGNYACAPLHEQQPVYWDNRFVMHAAPISTLDTE--APQLSAQRVFEAALRPMSQHKQQMADCTLYIRQLRRSDWDLMTSVSNRVRQFHTPFECIRALPVVFQKKAGSRATGDLVASPHLGLSARPDLYFMAVRLPRFRCLPDDIDPGFT 478          
BLAST of Gvermi799.t1 vs. uniprot
Match: A0A2V3IBZ6_9FLOR (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBZ6_9FLOR)

HSP 1 Score: 163 bits (413), Expect = 2.950e-45
Identity = 85/173 (49.13%), Postives = 113/173 (65.32%), Query Frame = 0
Query:    1 MLSPDVLSFHYPLVDAPAPAVQDAVSRLVPEHYRHLAHDPPFVPPELVPAALRLARDRHRSIAALTAQSDRLLRAAVLDTSHWGYVVARARPFFDSYNAGRAARLIAVHAMQRLCLHVSGSAKPPALDDAHVARLCHSVFSPTPTGHMRPLPKGRTAAGVVLRPATGRFAKRL 173
            ML    L+FH PL       +   V   VP  Y   A DP F+PP+L+ AAL+LA  +  S+  L  QSD LLR +VL+TSHW Y+VA     ++++N+G A RL  +HA QR+CLHVSGSAK  + D+  V R+C +VF P+   +++ LP+GRTAAGVVLRPATGRF +RL
Sbjct:    1 MLPKGTLTFHEPLSTVDHATICSTVQENVPPEYNRTA-DPTFMPPQLIQAALQLADQKKFSLQLLQHQSDDLLRNSVLETSHWSYIVAPTDMLYETFNSGGAPRLAVIHAAQRMCLHVSGSAKSLSRDEPQVNRVCETVFKPSADNNIQDLPEGRTAAGVVLRPATGRFGRRL 172          
BLAST of Gvermi799.t1 vs. uniprot
Match: A0A2V3ID12_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID12_9FLOR)

HSP 1 Score: 159 bits (401), Expect = 9.320e-43
Identity = 84/173 (48.55%), Postives = 111/173 (64.16%), Query Frame = 0
Query:    1 MLSPDVLSFHYPLVDAPAPAVQDAVSRLVPEHYRHLAHDPPFVPPELVPAALRLARDRHRSIAALTAQSDRLLRAAVLDTSHWGYVVARARPFFDSYNAGRAARLIAVHAMQRLCLHVSGSAKPPALDDAHVARLCHSVFSPTPTGHMRPLPKGRTAAGVVLRPATGRFAKRL 173
            ML    L+FH PL       +   V   V   Y   A DP F+PP+L+ AAL+LA  +  S+  L  QSD LLR +VL+TSHW Y+VA     ++++N G A RL  +HA QR+CLHVSGSAK  + D+  V R+C +VF P+   +++ LP+GRTAAGVVLRPATGRF +RL
Sbjct:   57 MLPKGTLTFHEPLSTVDHATICSTVQENVIPEYNRTA-DPTFMPPQLIQAALQLADQKKSSLQLLQHQSDDLLRNSVLETSHWSYIVAPTDMLYETFNFGGAPRLAVIHAAQRMCLHVSGSAKSLSRDEPQVNRVCETVFKPSVDNNIQDLPEGRTAAGVVLRPATGRFGRRL 228          
BLAST of Gvermi799.t1 vs. uniprot
Match: A0A2V3IC46_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC46_9FLOR)

HSP 1 Score: 157 bits (396), Expect = 9.890e-43
Identity = 83/174 (47.70%), Postives = 112/174 (64.37%), Query Frame = 0
Query:    1 MLSPDVLSFHYPLVDAPAPAVQDAVSRLVPEHYRHLAHDPPFVPPELVPAALRLARDRHRSIAAL-TAQSDRLLRAAVLDTSHWGYVVARARPFFDSYNAGRAARLIAVHAMQRLCLHVSGSAKPPALDDAHVARLCHSVFSPTPTGHMRPLPKGRTAAGVVLRPATGRFAKRL 173
            ML    L+FH PL     P       + VP  Y   A DP F+PP+L+ AAL+LA  +  S+      QSD LLR +VL++SHW Y+VA     ++++N+G A RL  +HA QR+CLHVSGSAK  + D+  V R+C +VF P+   +++ LP+GRTAAGVVLRPATGRF +RL
Sbjct:    1 MLPKGTLTFHEPLSTLITPQFAQPYKKNVPPEYNRTA-DPTFMPPQLIQAALQLANQKKFSLHIYCNTQSDDLLRNSVLESSHWSYIVAPTDMLYETFNSGGAPRLAVIHAAQRMCLHVSGSAKSLSRDEPQVNRVCETVFKPSADNNIQDLPEGRTAAGVVLRPATGRFGRRL 173          
BLAST of Gvermi799.t1 vs. uniprot
Match: A0A2V3IEQ1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEQ1_9FLOR)

HSP 1 Score: 74.7 bits (182), Expect = 8.390e-12
Identity = 41/88 (46.59%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    1 MLSPDVLSFHYPLVDAPAPAVQDAVSRLVPEHYRHLAHDPPFVPPELVPAALRLARDRHRSIAALTAQSDRLLRAAVLDTSHWGYVVA 88
            ML    L+FH PL       +   V   VP  Y   A DP F+PP+L+P AL+LA  +  S+  L  QSD LLR +VL+TSHWGY+VA
Sbjct:  133 MLPKGTLTFHVPLSTVDHAKICSTVHEKVPPKYNRTA-DPTFMPPQLIPDALQLADQKKSSLQLLQHQSDDLLRNSVLETSHWGYIVA 219          
The following BLAST results are available for this feature:
BLAST of Gvermi799.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J400_9FLOR7.140e-14661.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IBZ6_9FLOR2.950e-4549.13Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
A0A2V3ID12_9FLOR9.320e-4348.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IC46_9FLOR9.890e-4347.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEQ1_9FLOR8.390e-1246.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 393..410
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..392
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 411..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:376440..377803 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi799.t1Gvermi799.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 376440..377803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi799.t1 ID=Gvermi799.t1|Name=Gvermi799.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=413bp
MLSPDVLSFHYPLVDAPAPAVQDAVSRLVPEHYRHLAHDPPFVPPELVPA
ALRLARDRHRSIAALTAQSDRLLRAAVLDTSHWGYVVARARPFFDSYNAG
RAARLIAVHAMQRLCLHVSGSAKPPALDDAHVARLCHSVFSPTPTGHMRP
LPKGRTAAGVVLRPATGRFAKRLRADADHMIMLTREPDHESAHLTSTRLR
GNYTCAPLAPGRLEYWDNRFVIGAAPVSALQPHDHVPLLHPRRVFEAALQ
PAANHAQRITDCTLYVRQLRRADWDLITSVSSRARNFQTPFECIRALPAV
FQKPAATCEPGELVASPHLGLSARPDLCFVAVRLPRFRCLPADLDPGFTL
LHAVNMDTLAIRMSHICPTPKDKVTQMKLLKYDQAFHMCTRTTFVAVIML
LGNLIEIAFARI*
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