Gvermi7984.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7984.t1
Unique NameGvermi7984.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length88
Homology
BLAST of Gvermi7984.t1 vs. uniprot
Match: R7QE28_CHOCR (Putative Acetyl-CoA carboxylase biotin carboxyl carrier subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE28_CHOCR)

HSP 1 Score: 152 bits (384), Expect = 2.380e-44
Identity = 73/86 (84.88%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    2 DKHTVYDSDFVVKSERVGFFFSGAKNKPPLVNAGDHVDFNQPVCIIEQLGQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRPD 87
            D  TVYDSDFVV S RVGFF+SGAKNKPPLVN GDHVDFNQPVCIIEQLGQQYVY SEASGTV ++FVEDGDAVEY Q +MVIRPD
Sbjct:  172 DPETVYDSDFVVMSNRVGFFYSGAKNKPPLVNVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVNEIFVEDGDAVEYDQKVMVIRPD 257          
BLAST of Gvermi7984.t1 vs. uniprot
Match: A0A2V3IQ63_9FLOR (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ63_9FLOR)

HSP 1 Score: 154 bits (388), Expect = 3.420e-42
Identity = 75/86 (87.21%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    2 DKHTVYDSDFVVKSERVGFFFSGAKNKPPLVNAGDHVDFNQPVCIIEQLGQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRPD 87
            D  TVYDSDFVV S RVGFFFSGAKNKPPLVN GD V FNQPVCIIEQLGQQYVY SEASGTVLK+FVEDGDAVEYGQ +MVIRPD
Sbjct:  512 DPDTVYDSDFVVTSNRVGFFFSGAKNKPPLVNVGDPVKFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQQVMVIRPD 597          
BLAST of Gvermi7984.t1 vs. uniprot
Match: A0A1X6PIH3_PORUM (Lipoyl-binding domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIH3_PORUM)

HSP 1 Score: 132 bits (331), Expect = 2.790e-36
Identity = 62/82 (75.61%), Postives = 68/82 (82.93%), Query Frame = 0
Query:    6 VYDSDFVVKSERVGFFFSGAKNKPPLVNAGDHVDFNQPVCIIEQLGQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRPD 87
            V +SDF V S RVGFFFSGAKNKPPLVN GDHV FNQPVCIIEQL  QYVY+SE SGTV+ + +EDGD VEYGQ +M IRPD
Sbjct:  184 VVESDFTVSSNRVGFFFSGAKNKPPLVNVGDHVGFNQPVCIIEQLSAQYVYKSEVSGTVVAVCLEDGDPVEYGQKLMAIRPD 265          
BLAST of Gvermi7984.t1 vs. uniprot
Match: A0A7J7IGY3_9RHOD (Lipoyl-binding domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGY3_9RHOD)

HSP 1 Score: 103 bits (257), Expect = 1.350e-24
Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    2 DKHTVYDSDFVVKSERVGFFFSGAKNKPPLVNAGDHVDFNQPVCIIEQLGQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRPD 87
            D   V D+DF V S RVGFF +G  ++PP V  GD V+  +PVC+IEQLG  +VY +E SGTV+K+ VEDG  VEYGQ +++IRP+
Sbjct:  267 DVSQVLDTDFKVVSNRVGFFHAGPSSRPPFVKVGDRVEVKRPVCMIEQLGNYFVYNAEVSGTVIKVCVEDGAPVEYGQELVIIRPE 352          
BLAST of Gvermi7984.t1 vs. uniprot
Match: A0A7V5M3F3_9BACT (Lipoyl-binding domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5M3F3_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 5.210e-23
Identity = 45/86 (52.33%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    2 DKHTVYDSDFVVKSERVGFFFSGAKNKPPLVNAGDHVDFNQPVCIIEQLGQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRPD 87
            D   + D+DF V S RVG F +G  ++PP V  GD ++  +PVCIIEQLG  +VY SE SGTV+K+ VEDG  VEYG+ +++IRP+
Sbjct:  266 DVSQILDTDFKVISNRVGIFRAGPPSRPPYVKVGDRIEVKRPVCIIEQLGNYFVYNSEVSGTVIKVCVEDGAPVEYGKELVIIRPE 351          
BLAST of Gvermi7984.t1 vs. uniprot
Match: A0A7C5CH34_9BACT (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C5CH34_9BACT)

HSP 1 Score: 70.1 bits (170), Expect = 3.580e-13
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 0
Query:   11 FVVKSERVGFFFSGAK-NKPPLVNAGDHVDFNQPVCIIEQLGQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRPD 87
            + +K+  VG F+   K   PP V  GDH+   Q VC+IE +      +SE SGTV+K+ VEDG  V+YGQ I ++RPD
Sbjct:   86 YEIKAPLVGTFYRSPKPGAPPFVEVGDHITAGQVVCLIEAMKLFNEIKSEISGTVVKVLVEDGKPVQYGQVIFLVRPD 163          
BLAST of Gvermi7984.t1 vs. uniprot
Match: A0A661AUZ6_9BACT (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=bacterium TaxID=1869227 RepID=A0A661AUZ6_9BACT)

HSP 1 Score: 68.2 bits (165), Expect = 2.380e-12
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
Query:   13 VKSERVGFFF-SGAKNKPPLVNAGDHVDFNQPVCIIEQLGQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRPD 87
            +K+  VG F+   + + PP VN GDH+D  Q VC+IE +      +SE SGT+ K+ VED   VE+GQ I ++ PD
Sbjct:   97 IKAPMVGTFYRKPSPDSPPYVNVGDHIDVGQVVCLIEAMKLFNEVKSEISGTIKKILVEDASPVEFGQVIFLVEPD 172          
BLAST of Gvermi7984.t1 vs. uniprot
Match: A0A2V9KUD8_9BACT (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9KUD8_9BACT)

HSP 1 Score: 66.6 bits (161), Expect = 1.220e-11
Identity = 31/76 (40.79%), Postives = 49/76 (64.47%), Query Frame = 0
Query:   12 VVKSERVGFFFSGAK-NKPPLVNAGDHVDFNQPVCIIEQLGQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRP 86
            ++KS  VG F+SG   + PP VN GD ++  + +CIIE +       SEA+G ++++FVE+G  VEYGQ +  ++P
Sbjct:  108 IIKSPIVGTFYSGPNPSAPPFVNVGDVIEAGRVLCIIEAMKLMNEIESEAAGEIVRVFVENGQPVEYGQPLFAVKP 183          
BLAST of Gvermi7984.t1 vs. uniprot
Match: A0A7X8XC02_9BACT (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X8XC02_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 1.430e-11
Identity = 37/86 (43.02%), Postives = 47/86 (54.65%), Query Frame = 0
Query:    3 KHTVYDSDFVVKSERVGFFF-SGAKNKPPLVNAGDHVDFNQPVCIIEQLGQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRPD 87
            K T  D+  +V +   G F+ SGA   PP V  GDHV     VCI+E +      +SE SG V K+ VE+G  VEYGQ +  IR D
Sbjct:   57 KETPPDNTAMVSAPMPGTFYTSGAPELPPFVKEGDHVGIGTVVCIVEAMKVMNEVKSEVSGVVSKVLVENGSPVEYGQPLFEIRID 142          
BLAST of Gvermi7984.t1 vs. uniprot
Match: UPI00131AFFCA (acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Acidobacterium sp. S8 TaxID=1641854 RepID=UPI00131AFFCA)

HSP 1 Score: 63.9 bits (154), Expect = 9.130e-11
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0
Query:   12 VVKSERVGFFF-SGAKNKPPLVNAGDHVDFNQPVCIIEQLGQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRP 86
            +VKS  VG F+ S +   P  V AGD V+  Q +CIIE +       S+ASG ++K FV++G  VEYGQ +  +RP
Sbjct:   90 IVKSPIVGTFYESPSPGTPAFVKAGDQVEQGQVLCIIEAMKLMNEIESDASGEIVKRFVQNGQPVEYGQQLFAVRP 165          
The following BLAST results are available for this feature:
BLAST of Gvermi7984.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QE28_CHOCR2.380e-4484.88Putative Acetyl-CoA carboxylase biotin carboxyl ca... [more]
A0A2V3IQ63_9FLOR3.420e-4287.21Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
A0A1X6PIH3_PORUM2.790e-3675.61Lipoyl-binding domain-containing protein n=1 Tax=P... [more]
A0A7J7IGY3_9RHOD1.350e-2454.65Lipoyl-binding domain-containing protein n=1 Tax=C... [more]
A0A7V5M3F3_9BACT5.210e-2352.33Lipoyl-binding domain-containing protein n=2 Tax=c... [more]
A0A7C5CH34_9BACT3.580e-1344.87Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
A0A661AUZ6_9BACT2.380e-1243.42Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
A0A2V9KUD8_9BACT1.220e-1140.79Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
A0A7X8XC02_9BACT1.430e-1143.02Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
UPI00131AFFCA9.130e-1143.42acetyl-CoA carboxylase biotin carboxyl carrier pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 27..84
e-value: 3.5E-10
score: 39.6
NoneNo IPR availableGENE3D2.40.50.100coord: 9..84
e-value: 3.5E-16
score: 61.0
NoneNo IPR availablePANTHERPTHR47597IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATEDcoord: 11..86
NoneNo IPR availableCDDcd06850biotinyl_domaincoord: 30..84
e-value: 5.53055E-14
score: 58.5816
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 12..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:484065..484328 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7984.t1Gvermi7984.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 484065..484328 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7984.t1 ID=Gvermi7984.t1|Name=Gvermi7984.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=88bp
LDKHTVYDSDFVVKSERVGFFFSGAKNKPPLVNAGDHVDFNQPVCIIEQL
GQQYVYRSEASGTVLKMFVEDGDAVEYGQHIMVIRPD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000089Biotin_lipoyl
IPR011053Single_hybrid_motif