Gvermi7982.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7982.t1
Unique NameGvermi7982.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length140
Homology
BLAST of Gvermi7982.t1 vs. uniprot
Match: A0A2V3IQ32_9FLOR (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ32_9FLOR)

HSP 1 Score: 228 bits (581), Expect = 2.190e-74
Identity = 112/129 (86.82%), Postives = 121/129 (93.80%), Query Frame = 0
Query:   11 MQLGAPSTQIXXXXXXIKKDVGRVTAQPSQPEADTERGSAKARPRRKTLADQVPMYKVILLGDEEYVEAHVVTQLQKTVQLEKKEATRIFWEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEKDE 139
            MQLGAPSTQI      IKKD+GRVT+QPS+P+AD ERGSAKARPRRKT AD+VPMYKVILLGDEEYVEAHVVTQLQKTVQLEKK+ATRIFWEAQGSGSSI+CVVCEEHAEFYAQQLKRQEIFV++EKDE
Sbjct:   50 MQLGAPSTQIGRPKTSIKKDIGRVTSQPSEPQADAERGSAKARPRRKTQADEVPMYKVILLGDEEYVEAHVVTQLQKTVQLEKKDATRIFWEAQGSGSSIICVVCEEHAEFYAQQLKRQEIFVVVEKDE 178          
BLAST of Gvermi7982.t1 vs. uniprot
Match: R7QD62_CHOCR (ClpS domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD62_CHOCR)

HSP 1 Score: 184 bits (467), Expect = 5.880e-57
Identity = 100/134 (74.63%), Postives = 111/134 (82.84%), Query Frame = 0
Query:    6 ARLARMQLGAPSTQIXXXXXXIKKDVGRVTAQPSQPEADTERGSAKARPRRKTLADQVPMYKVILLGDEEYVEAHVVTQLQKTVQLEKKEATRIFWEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEKDE 139
            AR   MQLG+P    XXXXX IKK VG     P+ PE DT +G+AKARPRRKT AD+VPMYKVILLG+EEYVEAHVVTQLQKTV ++KKEATR F EAQ SGSS+VCVVCEEHAEFYAQQLKRQ+IFV +EKDE
Sbjct:   51 ARFPSMQLGSPXXXXXXXXXSIKKSVGVTNDAPAAPETDTGKGAAKARPRRKTQADEVPMYKVILLGEEEYVEAHVVTQLQKTVGIDKKEATRKFQEAQQSGSSVVCVVCEEHAEFYAQQLKRQDIFVTVEKDE 184          
BLAST of Gvermi7982.t1 vs. uniprot
Match: A0A7S0ZCQ5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCQ5_9RHOD)

HSP 1 Score: 142 bits (357), Expect = 1.910e-40
Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 0
Query:   11 MQLGAPSTQIXXXXXXIKKDVGRVTAQPSQPEADTERGSAKARPRRKTLADQVPMYKVILLGDEEYVEAHVVTQLQKTVQLEKKEATRIFWEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEKD 138
            MQL AP  ++      + KD+ R++    +PEAD   GSAKA+PRRKT  +++P +KVILLGDE Y E HVVTQL K VQLEK EA R+F  AQ +GS IVCVV EE AEFY QQLKRQEI+ ++E D
Sbjct:   44 MQL-APGVKVGKPKVSVSKDMKRLSEPVKEPEADPNAGSAKAKPRRKTEQEEIPKFKVILLGDEGYDEVHVVTQLVKIVQLEKNEAARVFGVAQATGSEIVCVVNEEQAEFYVQQLKRQEIYALMEPD 170          
BLAST of Gvermi7982.t1 vs. uniprot
Match: A0A5J4Z5M8_PORPP (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5M8_PORPP)

HSP 1 Score: 141 bits (356), Expect = 3.740e-40
Identity = 74/126 (58.73%), Postives = 94/126 (74.60%), Query Frame = 0
Query:   15 APSTQIXXXXXXIKKDVGRVTAQPS-QPEADTERGSAKARPRRKTLADQVPMYKVILLGDEEYVEAHVVTQLQKTVQLEKKEATRIFWEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEKDE 139
            AP  ++      I+KD GR+T   S +P+AD   G+++A+PRR+T  +++PMYKVILLGDEEY E HVVTQL K VQLE+ EATRIF  AQ +GS IV VV EE AEFY QQLKRQE++ I+E+DE
Sbjct:   56 APGIKVGRPKTSIQKDTGRMTETKSPEPQADAAAGASRAKPRRETEMEEIPMYKVILLGDEEYDEVHVVTQLMKIVQLEQIEATRIFGVAQATGSEIVVVVNEELAEFYVQQLKRQELYAIMERDE 181          
BLAST of Gvermi7982.t1 vs. uniprot
Match: M2WV12_GALSU (ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WV12_GALSU)

HSP 1 Score: 118 bits (296), Expect = 8.560e-31
Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = 0
Query:   27 IKKDVGRVTAQPSQPE-ADTERGSAKARPRRKTLADQVPMYKVILLGDEEYVEAHVVTQLQKTV-QLEKKEATRIFWEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEK 137
            I+KD  ++ + P Q E  +T  G+A+A+P+RKT  + VPMYKVILLGDEEY +  VV  L K + ++E+ EA RIF EAQ +G SI+C+V +EHAEFYAQQLKR+E++V IE+
Sbjct:   93 IQKDTKKLVSPPKQEELTETGSGAARAKPKRKTQQEFVPMYKVILLGDEEYDQVAVVQALLKVIPKMEQAEARRIFHEAQSTGESIICIVEKEHAEFYAQQLKREEVYVRIEE 205          
BLAST of Gvermi7982.t1 vs. uniprot
Match: A0A7S0BIL2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BIL2_9RHOD)

HSP 1 Score: 115 bits (289), Expect = 2.570e-30
Identity = 58/98 (59.18%), Postives = 76/98 (77.55%), Query Frame = 0
Query:   42 EADTERGSAKARPRRKTLADQVPMYKVILLGDEEYVEAHVVTQLQKTV-QLEKKEATRIFWEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEKD 138
            E + +  + + +P+ KT AD++PMYKVILLGDE Y E HV TQL K + +    EA+R++ EAQ +GSSIVCVV +EHAEFYAQQL+RQEIFVI+E+D
Sbjct:   59 EVEQKAKTQRPKPKYKTDADEIPMYKVILLGDEGYDEVHVTTQLMKIIPKFTSDEASRVYREAQNTGSSIVCVVNKEHAEFYAQQLRRQEIFVIVEED 156          
BLAST of Gvermi7982.t1 vs. uniprot
Match: L1IZP3_GUITC (ClpS domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IZP3_GUITC)

HSP 1 Score: 111 bits (277), Expect = 8.480e-29
Identity = 63/130 (48.46%), Postives = 82/130 (63.08%), Query Frame = 0
Query:   11 MQLGAPSTQIXXXXXXIKKDVGRVTAQPSQPEADTERGSAKARPRRKTLADQVPMYKVILLGDEEYVEAHVVTQLQKTV-QLEKKEATRIFWEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEKDE 139
            MQL +P  QI      I   +G    +  +P+        KA P+RKT  D+ PMYKVILLGD EY ++HVVTQ+ K +  + K+E  RIF EAQ +GSS++ V  EEHAE Y QQLKRQ+I+  +EKDE
Sbjct:   10 MQLASP--QIAKPKVDIGHQLGTTQPEAGKPKV----AKPKAAPKRKTQDDECPMYKVILLGDNEYEQSHVVTQITKLIPSISKEEGIRIFVEAQMTGSSVIIVCTEEHAEHYVQQLKRQQIYAKMEKDE 133          
BLAST of Gvermi7982.t1 vs. uniprot
Match: A0A7S0LX83_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LX83_9CRYP)

HSP 1 Score: 111 bits (277), Expect = 2.880e-28
Identity = 63/130 (48.46%), Postives = 87/130 (66.92%), Query Frame = 0
Query:   11 MQLGAPSTQIXXXXXXIKKDVGRVTAQPSQPEADTERGSAKARPRRKTLADQVPMYKVILLGDEEYVEAHVVTQLQKTV-QLEKKEATRIFWEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEKDE 139
            MQL +P  QI      + + +G    + ++P A T   + K  P RKT  D+ PM+KVILLGD +Y ++HVVTQ+ K +  ++K+EA RI+ EAQ +GSS++ V  EEHAE YAQQLKRQ+I+  IEKDE
Sbjct:   52 MQLASP--QIARPKVDLGRSLGLSQPEAAKPGAKT--AAPKVTPVRKTQDDETPMFKVILLGDTDYEQSHVVTQITKVIPSVKKEEAIRIYVEAQMTGSSVIIVCTEEHAEHYAQQLKRQQIYAKIEKDE 177          
BLAST of Gvermi7982.t1 vs. uniprot
Match: A0A7S1E5L2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E5L2_HEMAN)

HSP 1 Score: 104 bits (259), Expect = 1.760e-25
Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 0
Query:   28 KKDVGRVTAQPSQPEADTERGSAKARPRRKTLADQVPMYKVILLGDEEYVEAHVVTQLQKTV-QLEKKEATRIFWEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEKD 138
            K +VG    QPS      +  + K +  +KT  D+ PMYKVILLGD EY ++HVVTQ+ K +  ++K+EATR + EAQ  G+S++  V EEHAE Y QQLKRQ+I+  +EK+
Sbjct:   65 KVEVGNPMKQPSTAPGAPKTSTPKPKLAKKTQDDEAPMYKVILLGDPEYEQSHVVTQITKVIPSVKKEEATRCYVEAQMMGTSVIITVTEEHAEHYVQQLKRQQIYAKMEKE 176          
BLAST of Gvermi7982.t1 vs. uniprot
Match: M1URX7_CYAM1 (ClpS domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1URX7_CYAM1)

HSP 1 Score: 102 bits (255), Expect = 9.950e-25
Identity = 62/137 (45.26%), Postives = 87/137 (63.50%), Query Frame = 0
Query:    5 GARLARMQLGAPSTQIXXXXXXIKKDVGRVTAQPSQPEADTERGSAKARPRRKTLADQ--VPMYKVILLGDEEYVEAHVVTQLQKTV-QLEKKEATRIFWEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEKD 138
            G RL R Q+ AP  +I      +K++  R+     + EA  E G+ + RP+ K + D   VPM+KVILLGD+EY E HV+  L KT+ +++K+EA RIF EAQ  G S+V VV +EHAEFYA  L+R  ++V IE +
Sbjct:   66 GHRLVRGQMPAP--KIGRPKTEVKRETFRMPEPVKEVEA--EAGAVRGRPKTKRVTDTEFVPMWKVILLGDKEYEEKHVIESLVKTIPKMDKEEARRIFKEAQAVGESVVTVVAQEHAEFYATMLRRCSLYVRIEPE 198          
The following BLAST results are available for this feature:
BLAST of Gvermi7982.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A2V3IQ32_9FLOR2.190e-7486.82ATP-dependent Clp protease adapter protein ClpS n=... [more]
R7QD62_CHOCR5.880e-5774.63ClpS domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S0ZCQ5_9RHOD1.910e-4057.81Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4Z5M8_PORPP3.740e-4058.73ATP-dependent Clp protease adapter protein ClpS n=... [more]
M2WV12_GALSU8.560e-3154.87ATP-dependent Clp protease adaptor protein ClpS n=... [more]
A0A7S0BIL2_9RHOD2.570e-3059.18Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
L1IZP3_GUITC8.480e-2948.46ClpS domain-containing protein n=1 Tax=Guillardia ... [more]
A0A7S0LX83_9CRYP2.880e-2848.46Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S1E5L2_HEMAN1.760e-2548.21Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
M1URX7_CYAM19.950e-2545.26ClpS domain-containing protein n=1 Tax=Cyanidiosch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 63..128
e-value: 1.3E-10
score: 40.9
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 40..137
e-value: 1.9E-14
score: 55.1
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 61..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:477009..477428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7982.t1Gvermi7982.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 477009..477428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7982.t1 ID=Gvermi7982.t1|Name=Gvermi7982.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=140bp
MRRRGARLARMQLGAPSTQIGRPKTQIKKDVGRVTAQPSQPEADTERGSA
KARPRRKTLADQVPMYKVILLGDEEYVEAHVVTQLQKTVQLEKKEATRIF
WEAQGSGSSIVCVVCEEHAEFYAQQLKRQEIFVIIEKDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like