Gvermi7979.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7979.t1
Unique NameGvermi7979.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length377
Homology
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BLAST of Gvermi7979.t1 vs. uniprot
Match: A0A2V3IQ39_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ39_9FLOR)

HSP 1 Score: 377 bits (968), Expect = 1.240e-125
Identity = 195/364 (53.57%), Postives = 259/364 (71.15%), Query Frame = 0 
Query:   17 HPFISSLYDAFSKRDASCLQQHLHPDVQWDTALFQVSSVDRVLDALDDFLSFAVDPTIAVYQAHHNASDRVLTLAYTLSFDYPLPWRPRVSVSADTTVSFSPDAAAKALRIVDGWYAAPLTLIVQALPRPTDIFWLYPSPHAETDRGQRKVLRTVGRFALVRQAPRHEYRIEAPLGSFEHELAWAMPALPPHAFEGALKSTETYAAVSPVALRL-----AAGARALA-DGSLLFEWAVPVPTALTGSGGAAPPQAPRAARARLTAVPARVLAVARFGGYSTQTEVRKRLGALLGALRERALVPDDDEPSLQFGGRNVWVRSYDCKIGFNSKGVLSIAMHGGSQGIRRVNEIALDVTDFVSEEQL 374
            +PF+S+LY AFS   A+C +      ++WD       S DRVLD LDDF +FAVDPTIAVYQ   +  +  L   +TLSF+YPLPWRPRVS S  ++V+ S   + +   I D WY +P TLI Q+LPR TD+FWLYPSPH+ETDRGQRK++R+  +++++ QAP  EYR+   +  +EHEL WAMPA+P HAFEG L+  E Y+AVSPVALRL       G RA A D +L ++WA+PVPT L GS      Q P A  A +  VP R++AVARF G+ST+TEV+KRL AL+ AL    ++P D++ S++FGGRNVWVR Y+CK+GFNSKGVLS+AM+GGS+G+ RVNEIA+D+T+ V+E+ +
Sbjct:   65 NPFLSALYRAFSTASAACFENLFEEGIRWDAPFLDAHSRDRVLDLLDDFFAFAVDPTIAVYQVQTSDDETQLQFNWTLSFNYPLPWRPRVSASGVSSVTLSSPTSVE--HIKDEWYTSPATLITQSLPRVTDMFWLYPSPHSETDRGQRKMIRSTSQYSIIHQAPCAEYRVLGQVEYYEHELIWAMPAIPKHAFEGGLRKLEQYSAVSPVALRLFEDFDLEGDRANAQDDTLTYQWALPVPTTLIGSSDVLV-QFPMAKDAHVLNVPRRLMAVARFKGFSTRTEVQKRLKALVDALVADNVIPPDEQ-SVRFGGRNVWVRGYECKVGFNSKGVLSMAMYGGSKGVPRVNEIAIDLTELVNEQDI 424
The following BLAST results are available for this feature:
BLAST of Gvermi7979.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ39_9FLOR1.240e-12553.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006917SOUL haem-binding proteinPFAMPF04832SOULcoord: 259..316
e-value: 1.2E-4
score: 22.2
IPR011256Regulatory factor, effector binding domain superfamilyGENE3D3.20.80.10Regulatory factor, effector binding domaincoord: 210..333
e-value: 8.5E-8
score: 34.0
IPR011256Regulatory factor, effector binding domain superfamilySUPERFAMILY55136Probable bacterial effector-binding domaincoord: 240..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:471657..472787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7979.t1Gvermi7979.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 471657..472787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7979.t1 ID=Gvermi7979.t1|Name=Gvermi7979.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=377bp
LPTLPSQPSSRSFSTLHPFISSLYDAFSKRDASCLQQHLHPDVQWDTALF
QVSSVDRVLDALDDFLSFAVDPTIAVYQAHHNASDRVLTLAYTLSFDYPL
PWRPRVSVSADTTVSFSPDAAAKALRIVDGWYAAPLTLIVQALPRPTDIF
WLYPSPHAETDRGQRKVLRTVGRFALVRQAPRHEYRIEAPLGSFEHELAW
AMPALPPHAFEGALKSTETYAAVSPVALRLAAGARALADGSLLFEWAVPV
PTALTGSGGAAPPQAPRAARARLTAVPARVLAVARFGGYSTQTEVRKRLG
ALLGALRERALVPDDDEPSLQFGGRNVWVRSYDCKIGFNSKGVLSIAMHG
GSQGIRRVNEIALDVTDFVSEEQLRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006917SOUL_haem-bd
IPR011256Reg_factor_effector_dom_sf