Gvermi7973.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7973.t1
Unique NameGvermi7973.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length323
Homology
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BLAST of Gvermi7973.t1 vs. uniprot
Match: A0A2V3IQ56_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ56_9FLOR)

HSP 1 Score: 81.3 bits (199), Expect = 4.030e-14
Identity = 51/123 (41.46%), Postives = 66/123 (53.66%), Query Frame = 0 
Query:  200 AGDSQPEQPPQAQTAQENSSSPXXXXXXXXXXXXXXPFKPSVSTVGIVGAVATVVVAAILVWSKSGNSPLSAAQLVSHAYQRVRTEGRRANASAQSSSDADGWNAGWDDDDEDWNTNTQSTKV 322
            A  S+ E+PP   TA E++ +P              P  PSVSTV I+GA  TV++   +VWSKS      A Q   H Y  V T+ R   A+A + +DADGWNAGW+DD EDW     + KV
Sbjct:  153 ANQSEAEKPP---TAAESAVAPSADQRLKT------PINPSVSTVAIIGAAITVLIGVYVVWSKSSRGATQATQSDDHTYHPVDTDPRADGAAAPNEADADGWNAGWEDD-EDWEPTAAANKV 265
The following BLAST results are available for this feature:
BLAST of Gvermi7973.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ56_9FLOR4.030e-1441.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..246
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..240
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 262..322
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..261
NoneNo IPR availableTMHMMTMhelixcoord: 240..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:411353..412321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7973.t1Gvermi7973.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 411353..412321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7973.t1 ID=Gvermi7973.t1|Name=Gvermi7973.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=323bp
MSPVLFCIALALFFVAAAGAPAPLSPPHASVEQALARRRRAHRVAFVVHV
VHSAARQHAEDAGVPEQADAGRGAGSPAASHTRPDESAHSETPPAAPQQA
EPPAKDTPQSDSKHGQAPRADPLQSEEKHNEQQADVSQAEPPQTQPQQDQ
SQQSQPQQSPSQPSQSQPSQSQQEESQQSHEQQDEAQQGKLTPESIAPGA
GDSQPEQPPQAQTAQENSSSPPSQPESLSKHSAQPPFKPSVSTVGIVGAV
ATVVVAAILVWSKSGNSPLSAAQLVSHAYQRVRTEGRRANASAQSSSDAD
GWNAGWDDDDEDWNTNTQSTKV*
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