Gvermi7959.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7959.t1
Unique NameGvermi7959.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length612
Homology
BLAST of Gvermi7959.t1 vs. uniprot
Match: A0A2V3IGN8_9FLOR (Polyadenylate-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGN8_9FLOR)

HSP 1 Score: 798 bits (2061), Expect = 1.350e-281
Identity = 446/680 (65.59%), Postives = 470/680 (69.12%), Query Frame = 0
Query:   99 AASSAAHSVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNIFVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPESAQAAIDKVNGKLLAGRKVYVGKFLNKREREAAGQVNKIFTNVYVKNVEDEKCNEEALRDIFSQFGEITSIHIAKNDDDSPRGFAFINFSSPEMAKRAVDEMHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDIDDERLRTEFSAYGTITSAKVMRDDKGFSKGFGFVCFTQPEEATKAVTELNGRMIGLKPIYVALAQRKEVRRAQLEAQRAMNRMSPNGMPPGAMYAQPSPYIYQQAMPNMAQVAGGMAPA---RSGAPMAPQYMAP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QKQMLGERLYPLITEMQPRLGGKITGMLLDMENSDILHLLDSPEILAERVEEAVTVLREHAAA 600
            AA  A HSVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNT DAE ALETMNYYSSPITKNKPLRMMWM+RDPSSRRSGAGNIFVKSLDK IDNKTLYDTFSQFG ILSCKVATDD+GQSLGHGFVHFET E+AQAAIDKVNGKLLAGRKVYVGKFLNKREREAAGQVNK+FTNVYVKN+E+EKCNEE +RD+FSQFGEITS+HIA NDDD+PRGFAFINF+SPEMAKRAV+EM++ E G+KRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDD+DD+RLR EFS YGTITSAKVMRDDKG+SKGFGFVCFTQPEEATKAVTELNGRM+GLKPIYVALAQRKEVRRAQLEAQRAMNRMSP GM  GAMYAQ   Y+Y QAM NM QVAG M  A   R+GAPM  QY+A                                                                                                                                                                                QKQMLGERLYPLITEMQPRL GKITGMLLDMENSD+LHLLDSPE L+ERVEEAV VLREHAAA
Sbjct:  132 AAMPAPHSVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTADAERALETMNYYSSPITKNKPLRMMWMIRDPSSRRSGAGNIFVKSLDKDIDNKTLYDTFSQFGTILSCKVATDDSGQSLGHGFVHFETQEAAQAAIDKVNGKLLAGRKVYVGKFLNKREREAAGQVNKMFTNVYVKNIEEEKCNEECVRDLFSQFGEITSVHIATNDDDTPRGFAFINFASPEMAKRAVEEMNEKEFGTKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDVDDDRLRAEFSPYGTITSAKVMRDDKGYSKGFGFVCFTQPEEATKAVTELNGRMMGLKPIYVALAQRKEVRRAQLEAQRAMNRMSPGGMAGGAMYAQAPAYMYPQAMANMGQVAGAMGAATGGRNGAPM--QYIAAVGRGGGAGAFGRXXXXXXXXXXXXXXGQAGVGPVMNMHAFPMGAGRQPRQNRQRGGGPNXXXXXXXXGGMVGVRGGGVGRGVGGGANGVGHAVTATAVGPGGYNKYAGXXXXXXXXXXXNGQAVAGVGPSNGGVXXXXXXXXXXXXXXXXAPQAGSGVAQEPLTIEMLANATAVQQKQMLGERLYPLITEMQPRLSGKITGMLLDMENSDLLHLLDSPETLSERVEEAVAVLREHAAA 809          
BLAST of Gvermi7959.t1 vs. uniprot
Match: R7QQX6_CHOCR (Polyadenylate-binding protein (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQX6_CHOCR)

HSP 1 Score: 670 bits (1729), Expect = 1.030e-233
Identity = 334/434 (76.96%), Postives = 378/434 (87.10%), Query Frame = 0
Query:  103 AAHSVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNIFVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPESAQAAIDKVNGKLLAGRKVYVGKFLNKREREAAGQVNKIFTNVYVKNVEDEKCNEEALRDIFSQFGEITSIHIAKNDDDSPRGFAFINFSSPEMAKRAVDEMHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDIDDERLRTEFSAYGTITSAKVMRDDKGFSKGFGFVCFTQPEEATKAVTELNGRMIGLKPIYVALAQRKEVRRAQLEAQRAMNRMSPNGMPPGAMYAQPSPYIYQQAMPNMAQVAGGMAPARSGAPMAPQYMA 536
            A HS SLYVGDLHP+++EANL+EIFQALGPVQSIRVCRDVVTRRSLGY+YINFHN  DAE ALETMNYYSS +TKNKPLRMMWM+RDPS RR+GAGNIFVKSLDKSI NK+LYDTFSQFG ILSCKVATDDNG+SLGHGFVHFETPE+AQ AI+KVNGKLLAGRKVYVGKFLNKREREAAGQVNKIFTNV++KN++D  C+EE LR++F++FG+ITSIH+A+++   P+GFAF+NF+SPEMAKRAVD M+  EV  K L +  AQKKSVREAELRNK+E++R ER QKYQGINLY+KNLSDDIDD+RLRTEFS YGTITS K+MRDDKGFS+GFGFVC+T P+EATKAVTELNGRM+G KPIYVALAQRK+VRRAQLEAQR MN   P  +P GAMYAQPSPY      PNM  V     P R+G  M P YMA
Sbjct:    2 AQHSASLYVGDLHPEISEANLYEIFQALGPVQSIRVCRDVVTRRSLGYSYINFHNVVDAERALETMNYYSSQLTKNKPLRMMWMIRDPSQRRTGAGNIFVKSLDKSIRNKSLYDTFSQFGTILSCKVATDDNGESLGHGFVHFETPEAAQLAIEKVNGKLLAGRKVYVGKFLNKREREAAGQVNKIFTNVFIKNLDDSICDEEKLRELFAEFGDITSIHVAQDEVAKPKGFAFVNFASPEMAKRAVDGMNGKEVAGKTLVLNAAQKKSVREAELRNKHEIIRNERMQKYQGINLYIKNLSDDIDDDRLRTEFSPYGTITSCKIMRDDKGFSRGFGFVCYTTPDEATKAVTELNGRMVGQKPIYVALAQRKDVRRAQLEAQRQMNLRMPGAVPAGAMYAQPSPYXXXXXXPNMGSV-NQAVPGRNGPYMHPPYMA 434          
BLAST of Gvermi7959.t1 vs. uniprot
Match: A0A1X6NR25_PORUM (Polyadenylate-binding protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NR25_PORUM)

HSP 1 Score: 533 bits (1373), Expect = 7.730e-178
Identity = 279/455 (61.32%), Postives = 340/455 (74.73%), Query Frame = 0
Query:  106 SVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNIFVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPESAQAAIDKVNGKLLAGRKVYVGKFLNKREREAAGQVNKIFTNVYVKNVEDEKCNEEALRDIFSQFGEITSIHI----AKNDDDS---PRGFAFINFSSPEMAKRAVDEMHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDIDDERLRTEFSAYGTITSAKVMRDDKGFSKGFGFVCFTQPEEATKAVTELNGRMIGLKPIYVALAQRKEVRRAQLEAQRAMN--RMSPN-GMPPGAMYAQPSPYIYQQAMPNMAQVAGGMAPARSGAPMAPQYMAPQKQ--MLGERLYP 548
            S +LYVGDL P++TEA+LFE+F A+G + SIRVCRDVVTRRSLGY Y+NFHN  DAE AL+TMN+Y+SP TK++PLR+MW  RD S R+ G GN+++K+LDKSI+NK LYDTFS FG I+SCKVATD +G S G+GFVHFE PESA+ A+ +VNG LLAGRKVYVG FL+KRERE  GQ+++ FTNVYVKN++D  C EE LR++F  +GE+TSIH+    A +  D+   P+GFAFINF+ P+ A  A + +   E  +K L V  AQKKS REAELR K+E  R ER QKYQG+NLYVKNLSD+IDD+RLR EF+AYGTITS K+MRD++G S+GFGFVCFTQPEEATKAVTELNGR +G KPIYVALAQRKE RR QLEAQRA+   RM P   MP    Y  P+P  YQQ+      V  G  P        PQY+A   +   +G R YP
Sbjct:  139 SATLYVGDLDPEVTEASLFEVFSAVGQLSSIRVCRDVVTRRSLGYGYVNFHNVADAERALDTMNFYASPATKDRPLRLMWKHRDASVRKIGQGNVYIKNLDKSINNKELYDTFSAFGNIMSCKVATDPSGNSKGYGFVHFEAPESAETAMKRVNGMLLAGRKVYVGPFLSKREREERGQISRAFTNVYVKNIDDSICTEEKLRELFEPYGEVTSIHVPATPAPSGSDAAPTPKGFAFINFAKPDEAAAATEALDGKEFATKALYVGRAQKKSEREAELRQKHESFRQERQQKYQGVNLYVKNLSDEIDDDRLRQEFAAYGTITSCKLMRDERGNSRGFGFVCFTQPEEATKAVTELNGRFVGSKPIYVALAQRKEDRRMQLEAQRAVGVLRMPPTPDMPLAPNYGGPAPLFYQQSPVGQPGVGRGQMPFAH-----PQYLAAMSRGGPVGARGYP 588          
BLAST of Gvermi7959.t1 vs. uniprot
Match: A0A5J4Z069_PORPP (Polyadenylate-binding protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z069_PORPP)

HSP 1 Score: 515 bits (1327), Expect = 3.070e-172
Identity = 281/499 (56.31%), Postives = 353/499 (70.74%), Query Frame = 0
Query:   96 VPAAASSAAHSVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNIFVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPESAQAAIDKVNGKLLAGRKVYVGKFLNKREREAAGQVNKIFTNVYVKNVEDEKCNEEALRDIFSQFGEITSIHI------AKNDDDS------------PRGFAFINFSSPEMAKRAVDEMHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDIDDERLRTEFSAYGTITSAKVMRDDKGFSKGFGFVCFTQPEEATKAVTELNGRMIGLKPIYVALAQRKEVRRAQLEAQRAMNRMSPNGMPPGAMYAQPSPYIY--QQAMPNMAQ------VAGGMAPARSGAP-MAPQYMA---------PQKQMLGERL---YPLITEMQP 555
            VP  A++   S SLYVGDLHPD+TEANLFE+F A+GPV SIRVCRD+VTRRSLGYAY+NF++  DAE AL+TMN+++SP TK+KPLR+MW  RDP+ RRSG GN+FVK+LDKSIDNKTLYDTFS FG I+SCKV TD++G+S G+GFVHFET E+A AAI +V+ K +AG+ V V  F +++EREA G+   +FTNV++KN+ +   NE  LR++F  +GEITS+ +      A+ DD               +GFAF+NF SPE A +AVDEM + EV  K L V  AQKKS RE ELR KYE  + ER QKYQG+NL+VKNLSDD+ ++RLR EF  YGTITS KVM DDKG S+GFGFVCF+QP+EATKAVTELNGR++G KPIYVALAQRK+VRRAQLEAQ A+    P  +P G M+ QP   ++  Q  +P   Q       AG   P  +G+P +  QY+A         PQ  M G  +    P++  MQP
Sbjct:   38 VPPGAANPIASASLYVGDLHPDVTEANLFEVFSAVGPVTSIRVCRDMVTRRSLGYAYVNFNSVVDAERALDTMNFFASPATKDKPLRLMWKHRDPNVRRSGQGNVFVKNLDKSIDNKTLYDTFSSFGNIMSCKVMTDEHGESRGYGFVHFETAEAADAAIAEVDKKDIAGKPVSVTHFKSRKEREATGESRSVFTNVFIKNLPESHANEAKLREMFGVYGEITSVFVPTVGKQAEEDDSEYSTEQQGGSTVGSKGFAFVNFESPEAAAKAVDEMDNKEVEDKVLYVGRAQKKSQRETELRAKYEQAKMERIQKYQGVNLFVKNLSDDVTEDRLRQEFMPYGTITSCKVMLDDKGASRGFGFVCFSQPDEATKAVTELNGRILGQKPIYVALAQRKDVRRAQLEAQMAIGLSVPGMVPGGPMFGQPGAGMFYPQAGIPPELQGAAAAAAAGRQGPGAAGSPFLNQQYLAAMSRGGPGGPQMMMRGGMMPSGAPVMYGMQP 536          
BLAST of Gvermi7959.t1 vs. uniprot
Match: A0A8H7U8R9_MORIS (Polyadenylate-binding protein n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7U8R9_MORIS)

HSP 1 Score: 513 bits (1322), Expect = 3.810e-172
Identity = 301/600 (50.17%), Postives = 376/600 (62.67%), Query Frame = 0
Query:   97 PAAASSAAHSVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNIFVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPESAQAAIDKVNGKLLAGRKVYVGKFLNKREREAA-GQVNKIFTNVYVKNVEDEKCNEEALRDIFSQFGEITSIHIAKNDDDSPRGFAFINFSSPEMAKRAVDEMHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDIDDERLRTEFSAYGTITSAKVMRDDK-GFSKGFGFVCFTQPEEATKAVTELNGRMIGLKPIYVALAQRKEVRRAQLEAQRAM-NRM----------SPNGMPPGAM-YAQPSPYI---------------------------YQQAMPNMAQVAGGMAPARSGAPM--------------------------------------------APQYM-------AP---QKQMLGERLYPLITEMQPRLGGKITGMLLDMENSDILHLLDSPEILAERVEEAVTVLREHAAAP 601
            P  A+    S SLYVG+L P +TEA LFE+F  +GPV SIRVCRD VTRRSLGYAY+NFHN  D E ALE++NY    + K KP R+MW  RDP+ R++G+GNIF+K+LD SIDNK L+DTFS FG ILSCKVATD+ GQS G+GFVH+ET E+A+AAI  VNG LL  +KVYVG  + ++ER++   ++   FTN+YVKN++ E  +EE  +++F +FG ITS  I +++D   +GF F+NF   E AK AV+E++D E+  K L V  AQKKS RE EL+ +YE  + E+  KYQG+NLYVKN+ DDIDDE+LR EFS YG ITSAKVMRD+K G SKGFGFVCF+ P+EATKAVTE+NGRMIG KPIYVALAQRK+VRR+QLEAQ A  N+M          +P  MP   M YA P  ++                            Q  MP   QV  G AP   G P                                             APQ +       AP   QKQMLGERLYPLI + QP   GKITGMLL+M+ S++LHLL+  E L  ++ EAV+VL+EH   P
Sbjct:   53 PPTAAGNTTSASLYVGELDPTVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNMVDGERALESLNY---TLIKGKPCRIMWSQRDPALRKTGSGNIFIKNLDASIDNKALHDTFSAFGNILSCKVATDEEGQSKGYGFVHYETHEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQSKIDEIRANFTNIYVKNLDAEVSDEE-FQEMFGKFGAITSAVIQRDEDGKSKGFGFVNFEEHEAAKVAVEELNDKEIKGKVLFVSRAQKKSEREDELKKQYEQAKLEKMSKYQGVNLYVKNIDDDIDDEKLRQEFSVYGVITSAKVMRDEKTGASKGFGFVCFSAPDEATKAVTEMNGRMIGSKPIYVALAQRKDVRRSQLEAQMAQRNQMRMQQAMPMPGAPGYMPGAPMFYAPPGGFMPQGQRPVFPQNGMVARPRWGPQGPQQGQQMPMPGYPQVPQGFAPNMQGRPQRGPRPPRGGXXXXXXRPQPAGQNAPGRKFGNQQRPNGTSGAQDAAPQALTAAALASAPPEMQKQMLGERLYPLIQQQQPEAAGKITGMLLEMQTSELLHLLEDNEALDAKITEAVSVLKEHTDEP 648          
BLAST of Gvermi7959.t1 vs. uniprot
Match: A0A0M0K6C2_9EUKA (Polyadenylate-binding protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K6C2_9EUKA)

HSP 1 Score: 508 bits (1308), Expect = 5.090e-172
Identity = 286/528 (54.17%), Postives = 369/528 (69.89%), Query Frame = 0
Query:  106 SVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNIFVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPESAQAAIDKVNGKLLAGRKVYVGKFLNKRER-EAAGQVNKIFTNVYVKNVEDEKCNEEALRDIFSQFGEITSIHIAKNDDDSPRGFAFINFSSPEMAKRAVDEMHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDIDDERLRTEFSAYGTITSAKVMRDDKGFSKGFGFVCFTQPEEATKAVTELNGRMIGLKPIYVALAQRKEVRRAQLEAQRAMN------RMS----PNGMPPGAMYAQPSPYIY----QQAMPNMAQVAGGMAPARSGAP--MAPQYM-------AP---QKQMLGERLYPLITEMQPRLGGKITGMLLDMENSDILHLLDSPEILAERVEEAVTVLREHAAAPGDQAP 606
            + SLYVGDLHP++TEA LFE+F A+GPV SIRVCRD V+RRSLGYAY+NFH+  DAE ALETMNY    + KNKP R+MW  RDPS R+SG+GN+F+K+LDKSIDNK LYDTFS FG ILSCKVATDD G S G+GFVH+ET ++AQ A+ KVNG LL G+KV+VG F+ +++R E+    +  FTNV+VK++  E  ++E L  +F+ +GEI S  + K+ D   RGF F+NF+  + A +A++E++  E   K L V  AQKK  RE ELR+K++ L+ ER+ K+ G+NLYVKNL D +DDE+LR  F+ YG+I+SAKVM DDKG SKGFGFVCF   EEATKAV+E+NG+++G KP+YVALAQRK+ R+  LE Q          RM+      G  PGA   QP  + Y    +  MP M     GMAP        M PQ M       AP   QKQ+LGERL+PLI+++QP   GKITGMLL+M+N ++L+LL+SPE L  ++ EAV+VL  HAA  GD  P
Sbjct:    7 TASLYVGDLHPEVTEALLFELFNAVGPVASIRVCRDSVSRRSLGYAYVNFHSVVDAERALETMNY---TLIKNKPCRIMWCHRDPSLRKSGSGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVATDDLGGSKGYGFVHYETQDAAQLAVSKVNGMLLNGKKVFVGFFVPRKDRAESGAAADATFTNVFVKSLPAEVDDDEKLMGMFTPYGEIKSAVVMKDGDGKSRGFGFVNFAEHDDATKAIEELNGKETDGKTLYVGRAQKKRDRERELRDKFDQLKLERANKFTGVNLYVKNLDDIVDDEKLREAFAPYGSISSAKVMSDDKGNSKGFGFVCFGSTEEATKAVSEMNGQLLGNKPLYVALAQRKDERKNILEQQHVQRSNMTGMRMARGPEATGAMPGAYPGQP--FFYGGGKRGQMPGM-----GMAPQXXXXXXXMMPQDMTAASLAAAPPEQQKQLLGERLFPLISQVQPASAGKITGMLLEMDNGELLNLLESPEALNAKIMEAVSVLEMHAA-EGDGKP 523          
BLAST of Gvermi7959.t1 vs. uniprot
Match: A0A4W5PVF1_9TELE (Polyadenylate-binding protein n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5PVF1_9TELE)

HSP 1 Score: 503 bits (1296), Expect = 3.530e-170
Identity = 269/500 (53.80%), Postives = 353/500 (70.60%), Query Frame = 0
Query:  108 SLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNIFVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPESAQAAIDKVNGKLLAGRKVYVGKFLNKREREAA-GQVNKIFTNVYVKNVEDEKCNEEALRDIFSQFGEITSIHIAKNDDDSPRGFAFINFSSPEMAKRAVDEMHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDIDDERLRTEFSAYGTITSAKVMRDDKGFSKGFGFVCFTQPEEATKAVTELNGRMIGLKPIYVALAQRKEVRRAQLEAQRAMNRMSPNGMPPGAMYAQ--PSPYIYQQAMPNMAQVAGGMAPARSGAPMAPQYMAP-----QKQMLGERLYPLITEMQPRLGGKITGMLLDMENSDILHLLDSPEILAERVEEAVTVLREHAA 599
            SLYVGDLHPD+TEA L+E F   GPV SIRVCRD++TRRSLGYAY+NF   TDAE AL+TMN+    + K KP+R+MW  RDPS R+SG GN+F+K+LDK+IDNK LYDTFS FG ILSCKV  D+NG S G+ FVHFET ++A  AI+K+NG LL  RKV+VG+F +++EREA  G   K FTNVY+KN  D+  N++ L+++F Q+G+I S+ +  +     RGF F+++   E A +A +EM+  E   K + V  AQKK  R+ EL+ K+EML+ ER  +YQG+NLY+KNL D IDDE+LR EF+ +G+ITSAKVM ++ G SKGFGFVCF+ PEEATKAVTE+NGR++G KP+YVALAQRKE R+A L  Q          MP  A+  Q  P+   +  A+P +++        +   P+    +A      QKQMLGERL+PLI  M P L GKITGMLL+++NS++LH+L+S E L  +VEEAV VL+ H A
Sbjct:   13 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPTDAERALDTMNF---DVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDM-NDDKLKEMFDQYGKILSVKVMTDPSGKSRGFGFVSYEKHEDANKACEEMNGQEFNGKTVFVGRAQKKIERQGELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFTPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRITGMRAMPANAIINQFQPASGYFMPAVPQVSEGGREAVHVQGQEPLTSSMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESHESLRSKVEEAVAVLQAHQA 506          
BLAST of Gvermi7959.t1 vs. uniprot
Match: A0A452V173_URSMA (Polyadenylate-binding protein n=5 Tax=Boreoeutheria TaxID=1437010 RepID=A0A452V173_URSMA)

HSP 1 Score: 503 bits (1294), Expect = 8.670e-170
Identity = 278/519 (53.56%), Postives = 360/519 (69.36%), Query Frame = 0
Query:   99 AASSAAHSVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNIFVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPESAQAAIDKVNGKLLAGRKVYVGKFLNKREREAA-GQVNKIFTNVYVKNVEDEKCNEEALRDIFSQFGEITSIHIAKNDDDSPRGFAFINFSSPEMAKRAVDEMHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDIDDERLRTEFSAYGTITSAKVMRDDKGFSKGFGFVCFTQPEEATKAVTELNGRMIGLKPIYVALAQRKEVRRAQLEAQRAMNRMSPNGMPPGAMYAQPSPYIYQQAMPNMAQVAGGMAPARSGAPMAPQ----------------YMAP---QKQMLGERLYPLITEMQPRLGGKITGMLLDMENSDILHLLDSPEILAERVEEAVTVLREH 597
            AA+S+    SLYVGDLH D+TEA L+E F   GPV SIRVCRD++TRRSLGYAY+NF    DAE AL+TMN+    + K KP+R+MW  RDPS R+SG GN+F+K+LDKSIDNK LYDTFS FG ILSCKV  D+NG S G+ FVHFET E+A  AI+K+NG LL  RKV+VG+F +++EREA  G   K FTNVY+KN   E+ ++E+L+++FSQFG+  S+ + ++     +GF F+++   E A +AV+EM+  E+  K + V  AQKK  R+AEL+ K+E L+ ER  +YQG+NLY+KNL D IDDE+LR EFS +G+ITSAKVM +D G SKGFGFVCF+ PEEATKAVTE+NGR++G KP+YVALAQRKE R+A L  Q          +P  A+  Q  P      +P + Q A G  P  +   +APQ                  AP   QKQMLGERL+PLI  M   L GKITGMLL+++NS++LH+L+SPE L  +V+EAV VL+ H
Sbjct:    3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNF---DVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNF-GEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQ-AQGRPPYYTPNQLAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAH 514          
BLAST of Gvermi7959.t1 vs. uniprot
Match: A0A0L0S445_ALLM3 (Polyadenylate-binding protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S445_ALLM3)

HSP 1 Score: 502 bits (1292), Expect = 2.610e-168
Identity = 280/533 (52.53%), Postives = 361/533 (67.73%), Query Frame = 0
Query:  106 SVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNIFVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPESAQAAIDKVNGKLLAGRKVYVGKFLNKREREAAGQVNKI-FTNVYVKNVEDEKCNEEALRDIFSQFGEITSIHIAKNDDDSPRGFAFINFSSPEMAKRAVDEMHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDIDDERLRTEFSAYGTITSAKVMRDDKGFSKGFGFVCFTQPEEATKAVTELNGRMIGLKPIYVALAQRKEVRRAQLEAQRAMN-------RMSPNGMPPGAMYAQPSP-------------YIYQQAMPNMAQVAGG-----MAPARS-GAPMAPQYMAP--------------QKQMLGERLYPLITEMQPRLGGKITGMLLDMENSDILHLLDSPEILAERVEEAVTVLREH 597
            + SLYVG+L P ++EA LFE+F  +GPV S+RVCRD VTRRSLGYAY+NFH   D E ALE +NY  +PI K +P R+MW  RDPS RRSG GNIF+K+LD SIDNK L+DTF+ FGKILSCKVAT D GQSLG+GFVH+ET E+A AAI  VNG LL  + VYVG  + K++REA   V +  FTN+YVKN+  E   E+A  ++F++FG + S  I ++D+   +GF F+N+   E A++AV+E+++ E+  K L V  AQKKS RE ELR  YE  R ER QK+QG N+Y+KNL D++DDE+LR+EFSA+GTITSAKVMRDDKG ++GFGFVC++ P+EATKAVTE+NG+M+G KP+YVALAQRKE RRAQLEAQ A         RM P   P   M   P P             ++  +  PN    +G       A  RS  AP AP  +                QKQ+LGE L+PLI   +P    K+TGMLL+M+ +++LHLL+SPE L  +++EA  +LREH
Sbjct:   81 TASLYVGELDPSVSEAFLFEMFNVIGPVASVRVCRDAVTRRSLGYAYVNFHLVQDGERALEQLNY--TPI-KGRPCRIMWSQRDPSLRRSGQGNIFIKNLDPSIDNKALHDTFAAFGKILSCKVATRD-GQSLGYGFVHYETKEAADAAIQAVNGMLLNDKAVYVGHHVPKKQREAEMAVQRAKFTNLYVKNL-PEDMTEDAFTNMFAEFGPVLSAVIQRDDEGKSKGFGFVNYGEHEAAQKAVEELNEKEIDGKPLYVARAQKKSEREEELRRTYEAARQERMQKFQGNNVYIKNLDDEVDDEQLRSEFSAFGTITSAKVMRDDKGTTRGFGFVCYSSPDEATKAVTEMNGKMMGSKPLYVALAQRKEQRRAQLEAQHAQRAHLAQPFRMGPGAGPAPMMPGMPYPGQPMHFPGQDPHSFLIARRPPNPEDGSGAPAEEVAAQGRSRAAPAAPSVLPAGLTPAALAAAEPEQQKQILGEALFPLIYAQEPEFAPKLTGMLLEMDATEVLHLLESPEDLHAKIDEAARLLREH 608          
BLAST of Gvermi7959.t1 vs. uniprot
Match: M2XW36_GALSU (Polyadenylate-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XW36_GALSU)

HSP 1 Score: 508 bits (1307), Expect = 2.890e-168
Identity = 255/436 (58.49%), Postives = 333/436 (76.38%), Query Frame = 0
Query:  106 SVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGYAYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNIFVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPESAQAAIDKVNGKLLAGRKVYVGKFLNKREREAAGQVNKIFTNVYVKNVEDEKCNEEALRDIFSQFGEITSIHIAKNDDDSPRGFAFINFSSPEMAKRAVDEMHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKNLSDDIDDERLRTEFSAYGTITSAKVMRDDKGFSKGFGFVCFTQPEEATKAVTELNGRMIGLKPIYVALAQRKEVRRAQLEAQR---AMNRMSPNGMPPGAMYAQPSP--YIYQQAMPNMAQVAGGMAPARSGAPMAPQYMA 536
            S ++YVGDLHP++ EANLFE+F A+GPV S+RVCRD+VTRRSLGYAY+NFH+  DAE ALETMN+Y+ P T++KP+R+MW  RDP+ R+SGAGN+F+K+LDK+IDNKTL+DTFS FG ILSCKVATDD G SLG+GFVHFE PE A+ AI+KVNG LL  ++VYVG F +++EREA+ + + IFTNVY KN+    C EE +R++FS +GEITS+++  ++++ P+GFAF+NF+ PE A +AV+E++  +   K L V  AQKK+ REAELR K E  RAE  +KYQG+NLYV+NL DD+D+E LR EFS +GT+TS +VMRDDKG S+GFGFVCF+ PEEATKAVTE+NG+M+G KP+YV LAQRKE+R+AQLEAQR   A   +   G  PG++Y QP           P   Q+   M      + + PQY+A
Sbjct:   76 SATIYVGDLHPEVNEANLFEVFSAIGPVASVRVCRDIVTRRSLGYAYVNFHSMDDAERALETMNFYACPQTRDKPMRLMWKNRDPTIRKSGAGNVFIKNLDKAIDNKTLFDTFSVFGNILSCKVATDDEGNSLGYGFVHFENPEDAETAINKVNGMLLNDKQVYVGYFKSRQEREASEETH-IFTNVYTKNLIPSMCTEEKIRELFSLYGEITSVYVPVDENEVPKGFAFVNFAKPECAAKAVEELNGRDFEGKSLYVGRAQKKAEREAELRRKAENKRAEILKKYQGVNLYVRNLPDDMDEEGLRKEFSNFGTLTSCRVMRDDKGVSRGFGFVCFSTPEEATKAVTEMNGKMMGKKPLYVCLAQRKEIRQAQLEAQRIAAAAGGLRIPGAVPGSLYPQPGAPXXXXXXXXPPQMQLQTNMMGRGQASFINPQYLA 510          
The following BLAST results are available for this feature:
BLAST of Gvermi7959.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGN8_9FLOR1.350e-28165.59Polyadenylate-binding protein n=1 Tax=Gracilariops... [more]
R7QQX6_CHOCR1.030e-23376.96Polyadenylate-binding protein (Fragment) n=1 Tax=C... [more]
A0A1X6NR25_PORUM7.730e-17861.32Polyadenylate-binding protein n=1 Tax=Porphyra umb... [more]
A0A5J4Z069_PORPP3.070e-17256.31Polyadenylate-binding protein n=1 Tax=Porphyridium... [more]
A0A8H7U8R9_MORIS3.810e-17250.17Polyadenylate-binding protein n=2 Tax=Umbelopsis T... [more]
A0A0M0K6C2_9EUKA5.090e-17254.17Polyadenylate-binding protein n=1 Tax=Chrysochromu... [more]
A0A4W5PVF1_9TELE3.530e-17053.80Polyadenylate-binding protein n=1 Tax=Hucho hucho ... [more]
A0A452V173_URSMA8.670e-17053.56Polyadenylate-binding protein n=5 Tax=Boreoeutheri... [more]
A0A0L0S445_ALLM32.610e-16852.53Polyadenylate-binding protein n=1 Tax=Allomyces ma... [more]
M2XW36_GALSU2.890e-16858.49Polyadenylate-binding protein n=1 Tax=Galdieria su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 467..487
NoneNo IPR availableCOILSCoilCoilcoord: 366..386
NoneNo IPR availableGENE3D1.10.1900.10coord: 528..609
e-value: 1.1E-26
score: 94.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePANTHERPTHR24012:SF466POLYADENYLATE-BINDING PROTEIN 1-LIKEcoord: 105..518
coord: 532..598
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 105..518
coord: 532..598
NoneNo IPR availableCDDcd12381RRM4_I_PABPscoord: 393..471
e-value: 2.81045E-52
score: 171.648
NoneNo IPR availableCDDcd12378RRM1_I_PABPscoord: 109..190
e-value: 2.62048E-41
score: 142.288
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 291..364
e-value: 9.2E-23
score: 91.6
coord: 108..184
e-value: 1.1E-17
score: 74.8
coord: 199..271
e-value: 1.7E-24
score: 97.4
coord: 395..467
e-value: 3.8E-25
score: 99.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 292..361
e-value: 7.6E-18
score: 64.1
coord: 200..268
e-value: 2.8E-20
score: 71.9
coord: 109..170
e-value: 1.1E-17
score: 63.6
coord: 396..464
e-value: 3.7E-20
score: 71.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 290..368
score: 18.308004
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 107..188
score: 15.698528
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 394..471
score: 19.143719
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 198..275
score: 17.523457
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 199..271
e-value: 11.0
score: 3.7
coord: 395..467
e-value: 0.039
score: 23.1
coord: 291..364
e-value: 0.075
score: 22.2
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinSMARTSM00517poly_2coord: 534..597
e-value: 2.7E-30
score: 116.7
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinPFAMPF00658PABPcoord: 537..594
e-value: 1.9E-23
score: 82.3
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinPROSITEPS51309PABCcoord: 522..599
score: 18.454607
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 376..480
e-value: 2.4E-27
score: 97.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 72..191
e-value: 5.3E-20
score: 73.9
coord: 279..375
e-value: 1.5E-22
score: 82.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 192..278
e-value: 2.4E-23
score: 84.2
IPR006515Polyadenylate binding protein, human types 1, 2, 3, 4TIGRFAMTIGR01628TIGR01628coord: 108..500
e-value: 7.7E-174
score: 578.1
IPR045305PABP, RNA recognition motif 2CDDcd12379RRM2_I_PABPscoord: 196..272
e-value: 9.54887E-49
score: 162.336
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 290..475
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 107..278
IPR036053PABC (PABP) domainSUPERFAMILY63570PABC (PABP) domaincoord: 484..604

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:310230..312581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7959.t1Gvermi7959.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 310230..312581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7959.t1 ID=Gvermi7959.t1|Name=Gvermi7959.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=612bp
MATETATPQQTTPASDVPSADHSVNSAATPVPSVSAAPAADTTSAPPVDK
KVADPAPPVATPVAAAPSAAPSAVPAASPAAAEGATTADQNNAVAVPAAA
SSAAHSVSLYVGDLHPDLTEANLFEIFQALGPVQSIRVCRDVVTRRSLGY
AYINFHNTTDAEHALETMNYYSSPITKNKPLRMMWMVRDPSSRRSGAGNI
FVKSLDKSIDNKTLYDTFSQFGKILSCKVATDDNGQSLGHGFVHFETPES
AQAAIDKVNGKLLAGRKVYVGKFLNKREREAAGQVNKIFTNVYVKNVEDE
KCNEEALRDIFSQFGEITSIHIAKNDDDSPRGFAFINFSSPEMAKRAVDE
MHDAEVGSKRLTVCPAQKKSVREAELRNKYEMLRAERSQKYQGINLYVKN
LSDDIDDERLRTEFSAYGTITSAKVMRDDKGFSKGFGFVCFTQPEEATKA
VTELNGRMIGLKPIYVALAQRKEVRRAQLEAQRAMNRMSPNGMPPGAMYA
QPSPYIYQQAMPNMAQVAGGMAPARSGAPMAPQYMAPQKQMLGERLYPLI
TEMQPRLGGKITGMLLDMENSDILHLLDSPEILAERVEEAVTVLREHAAA
PGDQAPGAAQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR002004PABP_HYD
IPR012677Nucleotide-bd_a/b_plait_sf
IPR006515PABP_1234
IPR045305RRM2_I_PABPs
IPR035979RBD_domain_sf
IPR036053PABP-dom