Gvermi7956.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7956.t1
Unique NameGvermi7956.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length221
Homology
BLAST of Gvermi7956.t1 vs. uniprot
Match: A0A2V3IGR4_9FLOR (Ras-related protein Rab-11B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGR4_9FLOR)

HSP 1 Score: 367 bits (942), Expect = 2.060e-127
Identity = 187/220 (85.00%), Postives = 198/220 (90.00%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFESVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSFLETSALDATNVDESFKQVLQQIHNVTTSNVVSGAIGEHAPDPHGEPIKLEALPSRKSAARGGGSSSSKCC 220
            MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK NTFESV RWLKELKDHAD+KIVVMLVGNKCDL+ ER+VS++ GT AA KFGLSFLETSALDATNVDESFKQVL+QIHN+TTSNVV G+IGE A DP GEPIKLE   +    AR     ++KCC
Sbjct:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKENTFESVPRWLKELKDHADSKIVVMLVGNKCDLKNEREVSIQQGTEAATKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVHGSIGEQASDPRGEPIKLEPSATSAKNAR-----AAKCC 215          
BLAST of Gvermi7956.t1 vs. uniprot
Match: A0A7S2AH65_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2AH65_9CHLO)

HSP 1 Score: 275 bits (703), Expect = 5.910e-91
Identity = 143/219 (65.30%), Postives = 168/219 (76.71%), Query Frame = 0
Query:    2 ARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFESVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSFLETSALDATNVDESFKQVLQQIHNVTTSNVVSGAIGEHAPDPHGEPIKLEALPSRKSAARGGGSSSSKCC 220
            ++ +D+YDYLFK+VLIGDSGVGKSNLL RFTRNE  L SK+TIGVEFATRS+PI GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK  TFE+V RWLKEL+DHADA IV+MLVGNK DLR  R VS E+  A   K GLSF+ETSAL++TNV+ SFKQ+L++I+ + + N ++   G  A  P G  I +   P     +     S SKCC
Sbjct:    3 SKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSLPIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKTVTFENVERWLKELRDHADANIVIMLVGNKSDLRHLRAVSTEEAAAFCEKEGLSFIETSALESTNVELSFKQILEEIYGIVSKNRMASEEGPSASVPKGNTIAI--TPGGGDDSSSASKSKSKCC 219          
BLAST of Gvermi7956.t1 vs. uniprot
Match: E1ZTE2_CHLVA (Uncharacterized protein n=3 Tax=Chlorellaceae TaxID=35461 RepID=E1ZTE2_CHLVA)

HSP 1 Score: 269 bits (688), Expect = 1.020e-88
Identity = 135/207 (65.22%), Postives = 164/207 (79.23%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFESVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSFLETSALDATNVDESFKQVLQQIHNVTTSNVVSGAIGEHAPDPHGEPIKL-EALPSRK 206
            + + +D+YDYLFK+VLIGDSGVGKSNLL RFTRNE  L SK+TIGVEFATRS+ + GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ TFE+V RWLKEL+DHADA IV+MLVGNK DLR  R V  ED  A   + GLSF+ETSAL+ATNV+++F+++L +I+++ +   ++   G  A    G  IK+ EA P  K
Sbjct:    2 VPKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLVGNKSDLRHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKKALASEDGPAAAPTSGTAIKVTEAAPEAK 208          
BLAST of Gvermi7956.t1 vs. uniprot
Match: A0A672I0C2_SALFA (Uncharacterized protein n=3 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672I0C2_SALFA)

HSP 1 Score: 269 bits (687), Expect = 1.400e-88
Identity = 136/212 (64.15%), Postives = 172/212 (81.13%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFESVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSFLETSALDATNVDESFKQVLQQIHNVTTSNVVSG-AIGEHAPDPHGEPIKLEALPSRKSAARG 211
            M+  EDEYDYLFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ ++GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T+E+  RWLKEL+DHAD+ IV+MLVGNK DLR  R V  ++ TA A K GLSFLETSALD+ NV+++F+Q+L +I+++ +   +SG +  + +P  +  PI +E  P++ S+++G
Sbjct:    1 MSNREDEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVPTDEATAFAEKNGLSFLETSALDSHNVEQAFQQILSEIYHIVSQRQMSGRSDSDFSPASNVVPITVE--PTQNSSSKG 210          
BLAST of Gvermi7956.t1 vs. uniprot
Match: A0A5J4Z794_PORPP (Ras-related protein Rab-11B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z794_PORPP)

HSP 1 Score: 266 bits (679), Expect = 2.300e-87
Identity = 137/220 (62.27%), Postives = 167/220 (75.91%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFESVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSFLETSALDATNVDESFKQVLQQIHNVTTSNVVSGAIGEHAPDPHGEPIKLEALPSRKSAARGGGSSSSKCC 220
            MAR +DEYDYLFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ + GK +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K+ TFE+V RWLKELKDHADA IV+MLVGNK DL+  R V+ E+GT  +A   LSF+ETSALDATNV+E+F ++L +I+ + +   +     +++  P       E +  +        S SSKCC
Sbjct:    1 MARPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKGTFENVSRWLKELKDHADANIVIMLVGNKSDLQHLRAVTTEEGTKFSAGNSLSFIETSALDATNVNEAFTRILTEIYRIVSKKTLE----KNSNAPAMSNNSFETIVIQNPTDEPAKSKSSKCC 216          
BLAST of Gvermi7956.t1 vs. uniprot
Match: A0A1X6NM24_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM24_PORUM)

HSP 1 Score: 265 bits (677), Expect = 4.330e-87
Identity = 136/220 (61.82%), Postives = 168/220 (76.36%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFESVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSFLETSALDATNVDESFKQVLQQIHNVTTSNVVSGAIGEHAPDPHGEPIKLEALPSRKSAARGGGSSSSKCC 220
            MAR +DEYDYLFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+  +GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKR TFE + RWLKEL D+AD  IV+ LVGNK DL+  R V+ +DGTA +AK  +SF+ETSALD +NV+E+F ++L +I+ + +S  +     E   +P  + I++    +  +  +     SSKCC
Sbjct:    1 MARTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRLTFEGIERWLKELTDNADPNIVIALVGNKADLQHLRAVTADDGTALSAKHQVSFIETSALDGSNVEEAFTRILTEIYRIASSKTLDKGTSEQF-NPSAQTIQINQNTAEDNKPK-----SSKCC 214          
BLAST of Gvermi7956.t1 vs. uniprot
Match: A0A1D1W0R7_RAMVA (Uncharacterized protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1W0R7_RAMVA)

HSP 1 Score: 265 bits (677), Expect = 5.130e-87
Identity = 136/206 (66.02%), Postives = 163/206 (79.13%), Query Frame = 0
Query:    2 ARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFESVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSFLETSALDATNVDESFKQVLQQIHNVTTSNVVSGAIGEHAPDPHGEPIKLEAL--PSR 205
            +R  +EYDYLFK+VLIGDSGVGKSNLL RFTRNE DL SK+TIGVEFATRSV + GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ K  TF+SV RWL+EL+D+AD KIV+MLVGNK DLR  R V  E+  + A K GL+F+ETSALDATNV+++F   L +I+ + T+  ++      A DP G PIK++A   PSR
Sbjct:    6 SREGNEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFDLESKSTIGVEFATRSVQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVCKHMTFDSVERWLRELRDNADQKIVIMLVGNKSDLRHLRAVPTEEAKSFAEKNGLTFIETSALDATNVEQAFYSTLHEIYKIVTTKEITNEAPRGALDP-GNPIKVDAKDNPSR 210          
BLAST of Gvermi7956.t1 vs. uniprot
Match: A0A1Y2F408_PROLT (Ras family-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2F408_PROLT)

HSP 1 Score: 264 bits (675), Expect = 7.620e-87
Identity = 140/221 (63.35%), Postives = 169/221 (76.47%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFESVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSFLETSALDATNVDESFKQVLQQIHNVTTSNVVSGAIGEHAPDP-HGEPIKLEALPSRKSAARGGGSSSSKCC 220
            M+R EDEYD+LFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ + GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K+ TFE+V RWLKEL+DHAD  IV+MLVGNK DL+  R V  E+GT  A +  LSF+ETSALDA+NV+ +F  +L +I+N+ +S  +  A  E+ P P  G+ I + A P+ K          SKCC
Sbjct:    1 MSR-EDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQPTFENVQRWLKELRDHADTSIVIMLVGNKSDLKHLRAVPTEEGTQFATENNLSFIETSALDASNVEGAFHSILTEIYNLVSSKALDPA--ENGPRPGDGQRITMTAAPADKQG--------SKCC 210          
BLAST of Gvermi7956.t1 vs. uniprot
Match: A0A6U0NGV1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A6U0NGV1_9VIRI)

HSP 1 Score: 264 bits (675), Expect = 8.160e-87
Identity = 135/220 (61.36%), Postives = 168/220 (76.36%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFESVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSFLETSALDATNVDESFKQVLQQIHNVTTSNVVSGAIGEHAPDPHGEPIKLEALPSRKSAARGGGSSSSKCC 220
            MA+ ++EYDYLFK+VLIGDSGVGKSNLL RFTRNE  L SK+TIGVEFATRS+ + GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK  T+E+V RWLKEL+DHAD+ IV+MLVGNK DLR  R V+ +D  A A K GLSF+ETSAL++TNV+ +F+++L +I+ + +   +    G+  P P     K+E  P+ ++  +      S CC
Sbjct:    1 MAKADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFALESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVMMLVGNKSDLRHLRAVATDDAAAFAEKEGLSFIETSALESTNVELAFQKILTEIYRIVSKKTIGADEGDAGPGPG---TKIEINPTAQTKKK-----DSSCC 212          
BLAST of Gvermi7956.t1 vs. uniprot
Match: R4X6B5_TAPDE (Putative Ras GTPase Rab11 n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4X6B5_TAPDE)

HSP 1 Score: 264 bits (674), Expect = 1.080e-86
Identity = 139/220 (63.18%), Postives = 168/220 (76.36%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFESVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSFLETSALDATNVDESFKQVLQQIHNVTTSNVVSGAIGEHAPDPHGEPIKLEALPSRKSAARGGGSSSSKCC 220
            M+R EDEYD+LFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ +  KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K+NTFE+V RWLKEL+DHAD+ IV+MLVGNK DLR  R V  E+    AA+  LSF+ETSALDA+NV+ +F+ +L +I+N+ +S  +  + G   P   G+ I +   PS +         SSKCC
Sbjct:    1 MSR-EDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQNTFENVQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKTFAAENNLSFIETSALDASNVEGAFQNILTEIYNIVSSRALDPSDGALRPTD-GQKIAITNAPSEEK--------SSKCC 210          
The following BLAST results are available for this feature:
BLAST of Gvermi7956.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGR4_9FLOR2.060e-12785.00Ras-related protein Rab-11B n=1 Tax=Gracilariopsis... [more]
A0A7S2AH65_9CHLO5.910e-9165.30Hypothetical protein n=1 Tax=Pycnococcus provasoli... [more]
E1ZTE2_CHLVA1.020e-8865.22Uncharacterized protein n=3 Tax=Chlorellaceae TaxI... [more]
A0A672I0C2_SALFA1.400e-8864.15Uncharacterized protein n=3 Tax=Salarias fasciatus... [more]
A0A5J4Z794_PORPP2.300e-8762.27Ras-related protein Rab-11B n=1 Tax=Porphyridium p... [more]
A0A1X6NM24_PORUM4.330e-8761.82Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1D1W0R7_RAMVA5.130e-8766.02Uncharacterized protein n=1 Tax=Ramazzottius varie... [more]
A0A1Y2F408_PROLT7.620e-8763.35Ras family-domain-containing protein n=1 Tax=Proto... [more]
A0A6U0NGV1_9VIRI8.160e-8761.36Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
R4X6B5_TAPDE1.080e-8663.18Putative Ras GTPase Rab11 n=1 Tax=Taphrina deforma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 150..172
score: 38.4
coord: 35..51
score: 28.66
coord: 12..33
score: 55.67
coord: 53..75
score: 53.98
coord: 115..128
score: 51.22
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 9..175
e-value: 3.8E-27
score: 106.2
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 17..218
e-value: 4.1E-5
score: 23.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 12..175
e-value: 8.6E-102
score: 354.2
NoneNo IPR availablePANTHERPTHR47978:SF12OS03G0843100 PROTEINcoord: 1..199
NoneNo IPR availablePANTHERPTHR47978FAMILY NOT NAMEDcoord: 1..199
NoneNo IPR availablePROSITEPS51420RHOcoord: 5..176
score: 9.668058
NoneNo IPR availablePROSITEPS51419RABcoord: 7..220
score: 33.749714
NoneNo IPR availableCDDcd01868Rab11_likecoord: 9..173
e-value: 2.45333E-122
score: 341.847
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 14..171
e-value: 3.3E-11
score: 24.1
IPR001806Small GTPasePFAMPF00071Rascoord: 13..173
e-value: 9.8E-61
score: 204.1
IPR001806Small GTPasePROSITEPS51421RAScoord: 4..220
score: 18.223898
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..168
e-value: 2.5E-37
score: 126.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..188
e-value: 8.5E-70
score: 236.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:303106..303865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7956.t1Gvermi7956.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 303106..303865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7956.t1 ID=Gvermi7956.t1|Name=Gvermi7956.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=221bp
MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFAT
RSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRNTFE
SVGRWLKELKDHADAKIVVMLVGNKCDLRAERQVSVEDGTAAAAKFGLSF
LETSALDATNVDESFKQVLQQIHNVTTSNVVSGAIGEHAPDPHGEPIKLE
ALPSRKSAARGGGSSSSKCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase