Gvermi7955.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7955.t1
Unique NameGvermi7955.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length215
Homology
BLAST of Gvermi7955.t1 vs. uniprot
Match: Q5BTS9_GRALE (Small GTPase n=4 Tax=Gracilariopsis TaxID=2781 RepID=Q5BTS9_GRALE)

HSP 1 Score: 383 bits (984), Expect = 6.420e-134
Identity = 193/206 (93.69%), Postives = 199/206 (96.60%), Query Frame = 0
Query:    9 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFENVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSFIETSALDNNNVEEAFRSILSEIYRLGSKKVLEKGAGGDFAPNATQTIVINPPTDEAKTEKAKCC 214
            DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSF+NVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAF++ N LSFIETSALDN+NVEEAFRSILSEIYRLGSKK LEKG+  +FAPNATQTIVINPP DE KTEKAKCC
Sbjct:   10 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGSTSNFAPNATQTIVINPPADEGKTEKAKCC 215          
BLAST of Gvermi7955.t1 vs. uniprot
Match: Q306M4_GRALE (Small GTPase Rab11 n=1 Tax=Gracilariopsis lemaneiformis TaxID=2782 RepID=Q306M4_GRALE)

HSP 1 Score: 355 bits (910), Expect = 1.500e-122
Identity = 180/200 (90.00%), Postives = 188/200 (94.00%), Query Frame = 0
Query:   15 VLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFENVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSFIETSALDNNNVEEAFRSILSEIYRLGSKKVLEKGAGGDFAPNATQTIVINPPTDEAKTEKAKCC 214
            VL   + + KSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSF+NVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAF++ N LSFIETSALDN+NVEEAFRSILSEIYRLGSKK LEKG+  +FAPNATQTIVINPP DE KTEKAKCC
Sbjct:   22 VLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGSTSNFAPNATQTIVINPPADEGKTEKAKCC 221          
BLAST of Gvermi7955.t1 vs. uniprot
Match: A0A5J4Z794_PORPP (Ras-related protein Rab-11B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z794_PORPP)

HSP 1 Score: 327 bits (837), Expect = 1.660e-111
Identity = 168/216 (77.78%), Postives = 189/216 (87.50%), Query Frame = 0
Query:    1 MARSEDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFENVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSFIETSALDNNNVEEAFRSILSEIYRLGSKKVLEKGAGGD-FAPNATQTIVINPPTDE-AKTEKAKCC 214
            MAR +DEYDYLFKVVLIGD+GVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQ +GKI+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KK +FENV RWLKELKDHADANIVIMLVGNKSDLQHL+AVTT++ + FS  N+LSFIETSALD  NV EAF  IL+EIYR+ SKK LEK +     + N+ +TIVI  PTDE AK++ +KCC
Sbjct:    1 MARPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKGTFENVSRWLKELKDHADANIVIMLVGNKSDLQHLRAVTTEEGTKFSAGNSLSFIETSALDATNVNEAFTRILTEIYRIVSKKTLEKNSNAPAMSNNSFETIVIQNPTDEPAKSKSSKCC 216          
BLAST of Gvermi7955.t1 vs. uniprot
Match: R7Q4F6_CHOCR (Small GTPase (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4F6_CHOCR)

HSP 1 Score: 315 bits (808), Expect = 1.810e-107
Identity = 154/191 (80.63%), Postives = 175/191 (91.62%), Query Frame = 0
Query:   24 KSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFENVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSFIETSALDNNNVEEAFRSILSEIYRLGSKKVLEKGAGGDFAPNATQTIVINPPTDEAKTEKAKCC 214
            KSNLLSRFTRNEF+LESKSTIGVEFATRSIQ EGK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KK +FENV+RWLKELKDHAD+NIVIMLVGNK DL+HL+AVTT++ S FS++N LSFIETSAL + NVE+AFR+ILSEIY+LGSKK L+KG GG+FAP  TQTIVINPP ++ K +K+KCC
Sbjct:    1 KSNLLSRFTRNEFNLESKSTIGVEFATRSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKGTFENVERWLKELKDHADSNIVIMLVGNKCDLKHLRAVTTEEGSGFSEENGLSFIETSALASTNVEDAFRTILSEIYKLGSKKALDKGTGGNFAPKGTQTIVINPPAEDPKVQKSKCC 191          
BLAST of Gvermi7955.t1 vs. uniprot
Match: A0A7S1ERB5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERB5_9RHOD)

HSP 1 Score: 316 bits (809), Expect = 3.740e-107
Identity = 163/222 (73.42%), Postives = 186/222 (83.78%), Query Frame = 0
Query:    1 MARSEDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFENVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSFIETSALDNNNVEEAFRSILSEIYRLGSKKVLEKGAG------GDFAPNATQTIVINPPTD--EAKTEKAKCC 214
            MAR +DEYDYLFKVVLIGD+GVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQ +GK+IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KK +FEN+ RWLKELKDHAD+NIVIMLVGNKSDLQHL+AVTT++ S FS  N+LSFIETSALD +NV EAF SIL+EIYR+ SKK LEKG+       G+   +  +TI I  P +  + K+    CC
Sbjct:    1 MARPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKPTFENISRWLKELKDHADSNIVIMLVGNKSDLQHLRAVTTEEGSKFSAGNSLSFIETSALDASNVNEAFTSILTEIYRIVSKKTLEKGSDNNQALMGNTVNSGFETIAIQNPAEPPQKKSGSKSCC 222          
BLAST of Gvermi7955.t1 vs. uniprot
Match: A0A1X6NM24_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM24_PORUM)

HSP 1 Score: 310 bits (795), Expect = 3.840e-105
Identity = 160/215 (74.42%), Postives = 183/215 (85.12%), Query Frame = 0
Query:    1 MARSEDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFENVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSFIETSALDNNNVEEAFRSILSEIYRLGSKKVLEKGAGGDFAPNATQTIVINPPT-DEAKTEKAKCC 214
            MAR++DEYDYLFKVVLIGD+GVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQ EGK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ +FE ++RWLKEL D+AD NIVI LVGNK+DLQHL+AVT DD +A S  + +SFIETSALD +NVEEAF  IL+EIYR+ S K L+KG    F P+A QTI IN  T ++ K + +KCC
Sbjct:    1 MARTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRLTFEGIERWLKELTDNADPNIVIALVGNKADLQHLRAVTADDGTALSAKHQVSFIETSALDGSNVEEAFTRILTEIYRIASSKTLDKGTSEQFNPSA-QTIQINQNTAEDNKPKSSKCC 214          
BLAST of Gvermi7955.t1 vs. uniprot
Match: M2Y664_GALSU (Rab family, other n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y664_GALSU)

HSP 1 Score: 309 bits (791), Expect = 1.610e-104
Identity = 150/214 (70.09%), Postives = 181/214 (84.58%), Query Frame = 0
Query:    1 MARSEDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFENVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSFIETSALDNNNVEEAFRSILSEIYRLGSKKVLEKGAGGDFAPNATQTIVINPPTDEAKTEKAKCC 214
            MARS+DEYDYLFK+VLIGD+GVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+Q EGK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KK+SF  V++WLKEL+DHAD+NIVIMLVGNKSDL+HL+AV+T++   F++ ++LSFIETSALD  NVE+AF  +L+EIYR+  KK L       F P   +++V+  P ++  T K KCC
Sbjct:    1 MARSDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGNKSDLKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALTNEKNPSFKPALGESVVVRDPAEDKGTHKKKCC 214          
BLAST of Gvermi7955.t1 vs. uniprot
Match: A7YYE6_DANRE (Zgc:92772 protein n=3 Tax=Cyprinoidei TaxID=30727 RepID=A7YYE6_DANRE)

HSP 1 Score: 309 bits (791), Expect = 1.790e-104
Identity = 157/215 (73.02%), Postives = 183/215 (85.12%), Query Frame = 0
Query:    1 MARSEDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFENVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSFIETSALDNNNVEEAFRSILSEIYRLGSKK-VLEKGAGGDFAPNATQTIVINPPTDEAKTEKAKCC 214
            MA  +DEYD+LFKVVLIGD+GVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQ +GK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  ++ENV+RWLKEL+DHAD NIVIMLVGNKSDL+HL+AV TD+A AF++ N LSFIETSALD+ NVEEAF++IL+EIYR+ S+K + E+ A G+   N    I + P TD  K+ K +CC
Sbjct:    1 MANRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHGESPGNNVVDISVPPTTDGQKSNKLQCC 215          
BLAST of Gvermi7955.t1 vs. uniprot
Match: UPI000C77A2E3 (ras-related protein Rab-11B-like isoform X2 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C77A2E3)

HSP 1 Score: 308 bits (788), Expect = 4.460e-104
Identity = 156/214 (72.90%), Postives = 181/214 (84.58%), Query Frame = 0
Query:    1 MARSEDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFENVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSFIETSALDNNNVEEAFRSILSEIYRLGSKKVLEKGAGGDFAPNATQTIVINPPTDEAKTEKAKCC 214
            M   +DEYDYLFKVVLIGD+GVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQ +GK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  ++ENV+RWL+EL+DHADANIVIMLVGNKSDL+HL+AV TD+A AF++ N LSFIETSALD+ NVE AF +IL+EIYR+ S+K + +G G    P  +QTI + P T   K +K +CC
Sbjct:    1 MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADANIVIMLVGNKSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKQISEGGGEMERPGGSQTINLQP-TQADKPDKKQCC 213          
BLAST of Gvermi7955.t1 vs. uniprot
Match: A0A7R9QK57_9ACAR (Hypothetical protein n=2 Tax=Oppiidae TaxID=229795 RepID=A0A7R9QK57_9ACAR)

HSP 1 Score: 307 bits (786), Expect = 9.980e-104
Identity = 156/215 (72.56%), Postives = 179/215 (83.26%), Query Frame = 0
Query:    1 MARSEDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFENVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSFIETSALDNNNVEEAFRSILSEIYRLGSKKVLEKGAGGDFAPNATQTIVIN-PPTDEAKTEKAKCC 214
            M   +DEYDYLFKVVLIGD+GVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQ +GK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  ++ENV+RWLKEL+DHAD NIVIMLVGNKSDL+HL+AV TD+A AF++ N+LSFIETSALD+ NVE AF+ IL+EIYR+ S+K +    G D +P+      IN PPTD +   K  CC
Sbjct:    1 MVSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNSLSFIETSALDSTNVEAAFQQILTEIYRIVSQKQIRNEGGDDPSPSHENIRPINIPPTDNSDRNKKPCC 215          
The following BLAST results are available for this feature:
BLAST of Gvermi7955.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q5BTS9_GRALE6.420e-13493.69Small GTPase n=4 Tax=Gracilariopsis TaxID=2781 Rep... [more]
Q306M4_GRALE1.500e-12290.00Small GTPase Rab11 n=1 Tax=Gracilariopsis lemaneif... [more]
A0A5J4Z794_PORPP1.660e-11177.78Ras-related protein Rab-11B n=1 Tax=Porphyridium p... [more]
R7Q4F6_CHOCR1.810e-10780.63Small GTPase (Fragment) n=1 Tax=Chondrus crispus T... [more]
A0A7S1ERB5_9RHOD3.740e-10773.42Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NM24_PORUM3.840e-10574.42Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2Y664_GALSU1.610e-10470.09Rab family, other n=1 Tax=Galdieria sulphuraria Ta... [more]
A7YYE6_DANRE1.790e-10473.02Zgc:92772 protein n=3 Tax=Cyprinoidei TaxID=30727 ... [more]
UPI000C77A2E34.460e-10472.90ras-related protein Rab-11B-like isoform X2 n=1 Ta... [more]
A0A7R9QK57_9ACAR9.980e-10472.56Hypothetical protein n=2 Tax=Oppiidae TaxID=229795... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 35..51
score: 36.77
coord: 115..128
score: 55.25
coord: 150..172
score: 42.78
coord: 12..33
score: 53.43
coord: 53..75
score: 51.41
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 9..175
e-value: 4.0E-26
score: 102.8
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 17..214
e-value: 8.2E-6
score: 33.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 12..175
e-value: 8.7E-108
score: 374.1
NoneNo IPR availablePANTHERPTHR47979DRAB11-RELATEDcoord: 4..214
NoneNo IPR availablePANTHERPTHR47979:SF49RAS-RELATED PROTEIN RAB-11Acoord: 4..214
NoneNo IPR availablePROSITEPS51420RHOcoord: 5..173
score: 10.171461
NoneNo IPR availablePROSITEPS51419RABcoord: 7..214
score: 36.093868
NoneNo IPR availableCDDcd01868Rab11_likecoord: 9..173
e-value: 6.14801E-128
score: 355.714
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 14..171
e-value: 1.1E-12
score: 42.4
IPR001806Small GTPasePFAMPF00071Rascoord: 13..173
e-value: 2.1E-62
score: 209.5
IPR001806Small GTPasePROSITEPS51421RAScoord: 2..214
score: 17.254566
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 4..214
e-value: 9.4E-73
score: 245.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..175
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..168
e-value: 4.1E-42
score: 141.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:301576..302420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7955.t1Gvermi7955.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 301576..302420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7955.t1 ID=Gvermi7955.t1|Name=Gvermi7955.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=215bp
MARSEDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFAT
RSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFE
NVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFSQDNALSF
IETSALDNNNVEEAFRSILSEIYRLGSKKVLEKGAGGDFAPNATQTIVIN
PPTDEAKTEKAKCC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom