Gvermi7953.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi7953.t1
Unique Name	Gvermi7953.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	242

Homology

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BLAST of Gvermi7953.t1 vs. uniprot
Match: A0A2V3IGW6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGW6_9FLOR)

HSP 1 Score: 246 bits (628), Expect = 8.220e-77
Identity = 145/243 (59.67%), Postives = 178/243 (73.25%), Query Frame = 0

Query:    1 MCSGCETGLNAMPPWAPERLKLMSEEEREGVMLQMHHKEQVGRLEAELRRKRVGDRDAVREHALHSSAAARVRASGASSCDERSSEDGGRVAVPQA-ELQSVELGTEESDGKWSSTSAVESVAVSDGSGSSGTLSMRSSLKRERSGVEDECQGCDDMEGKVKDLEEQLDVLREVVNMCSHNEQAG-KRDSGAEKKGKSWMGKIASAYYGSSAAASERTRLRGEVDALRKATDLLFHKLQKTGT 241
            MCS C TGL AMPPWAPERLKL+S+EERE V+ ++HHKE++GRLEAELRRKR+ DR+AV E  + +  A RV  S  +S    S+            +L+SV+LG +E       T +  +V++S       TL++  S+KRERS +EDECQ CDD+EG+VKDLEEQLDVLREVVNMCS NEQA  +RDS +EKKGKSWMGKIASAYYGSS AA+ER RL+GEV+ALRKATD LF KLQ  G+
Sbjct:  163 MCSSCGTGLKAMPPWAPERLKLLSQEERETVLRELHHKEEMGRLEAELRRKRLADRNAVSER-IQNRLAKRVSVSDQASLSSDSNXXXXXXXXXXXXDLESVDLGADEMY-----TQSTTTVSMSXXXXXXDTLTLPVSMKRERSTLEDECQECDDVEGRVKDLEEQLDVLREVVNMCSENEQASSRRDSHSEKKGKSWMGKIASAYYGSSTAAAERNRLKGEVEALRKATDFLFQKLQVNGS 399

The following BLAST results are available for this feature:

BLAST of Gvermi7953.t1 vs. uniprot

BLAST of Gvermi7953.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IGW6_9FLOR	8.220e-77	59.67	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 146..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..143

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:294593..295318 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi7953.t1	Gvermi7953.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 294593..295318 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi7953.t1 ID=Gvermi7953.t1|Name=Gvermi7953.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=242bp
MCSGCETGLNAMPPWAPERLKLMSEEEREGVMLQMHHKEQVGRLEAELRR
KRVGDRDAVREHALHSSAAARVRASGASSCDERSSEDGGRVAVPQAELQS
VELGTEESDGKWSSTSAVESVAVSDGSGSSGTLSMRSSLKRERSGVEDEC
QGCDDMEGKVKDLEEQLDVLREVVNMCSHNEQAGKRDSGAEKKGKSWMGK
IASAYYGSSAAASERTRLRGEVDALRKATDLLFHKLQKTGT*