Gvermi7949.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi7949.t1
Unique Name	Gvermi7949.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	318

Homology

[Close]

BLAST of Gvermi7949.t1 vs. uniprot
Match: A0A2V3IGR0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGR0_9FLOR)

HSP 1 Score: 222 bits (566), Expect = 2.880e-67
Identity = 125/297 (42.09%), Postives = 167/297 (56.23%), Query Frame = 0

Query:   24 EYLISDDFAGHSLVCQGQCHKAQSSSVHLAAPFGSDANSFYDNLRMVLPLSAPKENVHPSVSRKSADKDEDSKNEAADETPS---EDTCKKADCALLKEKLNCSTAGTYSRIAFVPLLSIKGGGYLFASVSSGITGLRDRYFSMEDEGGPAGYTVFVGSPKGMPTTVFAILQPTRAGSTTNGPLKFSIEQALISSPSRARIPLRSKLVRVGKFENLACTFDEDSPFRPLPRGLVREIESDSLLSANGYFKIAFKAQTNITSVALTLGRKQCAAVVLSTAPPCCVVRADIPVSYGSGC 317
            +Y+I  +FAG  L C G CH+AQ +   L      +      +L        P           + +K ED+ NE    +     +  C   +C+L +    CS AG  S IA+VPLLS +  GY+FAS+SS I GLR RYFS+E  GG +GYTVF G P   P T+FAILQPTR G   +    F IEQALI S  R R+PL+SK++R GKF N  CTF ++ PF P   G + + ES  L SAN  F + F+ +TN+T+V +++   +C A+VLST P CCVV A+IPV     C
Sbjct:   29 KYIIHHNFAGSDLTCSGACHQAQQAFPQLTDVQQMEFAFMRQHLNRADDYFTPT--ARQPGKHNNPNKQEDTSNEQTHHSNGHGPQKRCVPLNCSLPEHAAECSNAGMTSSIAYVPLLSSEDTGYIFASISSSIAGLRSRYFSLEGPGGRSGYTVFTGIPSEGPVTLFAILQPTRLGPLPSHKSNFLIEQALIFSSGRGRVPLQSKMIRHGKFNNSLCTFLDNEPFVPFSNGKINQTESKRLSSANENFSVGFRTETNVTAVRISIKNDECVAIVLSTGPGCCVVNAEIPVVTDERC 323

The following BLAST results are available for this feature:

BLAST of Gvermi7949.t1 vs. uniprot

BLAST of Gvermi7949.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IGR0_9FLOR	2.880e-67	42.09	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..104
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..11
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 12..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..317

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:284942..285986 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi7949.t1	Gvermi7949.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 284942..285986 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi7949.t1 ID=Gvermi7949.t1|Name=Gvermi7949.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=318bp
MRCHLTLFMLINVACLSLAIKGVEYLISDDFAGHSLVCQGQCHKAQSSSV
HLAAPFGSDANSFYDNLRMVLPLSAPKENVHPSVSRKSADKDEDSKNEAA
DETPSEDTCKKADCALLKEKLNCSTAGTYSRIAFVPLLSIKGGGYLFASV
SSGITGLRDRYFSMEDEGGPAGYTVFVGSPKGMPTTVFAILQPTRAGSTT
NGPLKFSIEQALISSPSRARIPLRSKLVRVGKFENLACTFDEDSPFRPLP
RGLVREIESDSLLSANGYFKIAFKAQTNITSVALTLGRKQCAAVVLSTAP
PCCVVRADIPVSYGSGC*