Gvermi7935.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7935.t1
Unique NameGvermi7935.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length235
Homology
BLAST of Gvermi7935.t1 vs. uniprot
Match: S0F2U0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2U0_CHOCR)

HSP 1 Score: 238 bits (606), Expect = 7.060e-76
Identity = 115/207 (55.56%), Postives = 162/207 (78.26%), Query Frame = 0
Query:   28 AQTGASQQQQQVRDRMNDFVDTMKHAVDDAEAANKKRDVVDLGQSLNLLESKFASLRSALSHELGARAPQFNSNNEVAKQIMDKSSGLVKGVVTQREELRRLSSDIKEVDSAIRALREGLTTFEKDVGELHRIIADLHVSHNEMSSVHEETKEKLKEVVADAHQMARTGTHWVLYLIIILELGAFVSYLYFKKSGGALSHKAYGKFG 234
            A    S+    +R RMND VD++K AV DAE+A KKR+VVDLGQSL+LLE+KF++LR AL  ELGA++    S++ VA +++D+S+ L++ +VTQRE+LRRL+ D+KEVDSAIRALREGL+ FEKD  EL++++ DLHVSHNE+ S HEE    +KE++AD+H++ R  TH + Y I++LE+ + V+++YFK+ GG L+HKAYGKFG
Sbjct:   22 ASVSLSEPADDMRHRMNDLVDSVKGAVHDAESAGKKREVVDLGQSLHLLETKFSALRQALQQELGAKSSTLASSSAVATELVDRSNTLIRNIVTQREDLRRLTGDVKEVDSAIRALREGLSNFEKDAAELNKVMGDLHVSHNELKSAHEEAHSSVKELMADSHEVVRKSTHGLFYAILLLEIASLVAFVYFKRPGGQLAHKAYGKFG 228          
BLAST of Gvermi7935.t1 vs. uniprot
Match: A0A2V3IU64_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU64_9FLOR)

HSP 1 Score: 233 bits (595), Expect = 3.990e-74
Identity = 121/196 (61.73%), Postives = 150/196 (76.53%), Query Frame = 0
Query:   39 VRDRMNDFVDTMKHAVDDAEAANKKRDVVDLGQSLNLLESKFASLRSALSHELGARAPQFNSNNEVAKQIMDKSSGLVKGVVTQREELRRLSSDIKEVDSAIRALREGLTTFEKDVGELHRIIADLHVSHNEMSSVHEETKEKLKEVVADAHQMARTGTHWVLYLIIILELGAFVSYLYFKKSGGALSHKAYGKFG 234
            VRD MN+FV+T+KHAV++AE+A+ K+DVVDLGQSL +LE KF+SLRSAL+ ELGA+AP   SNN VAK++MDKS+ LV+GVVTQREELRRLSSD+K+VDSAIRAL                      VSHNEMS+VH+E KEKLKEVVADAH MA+T TH +LY+++  E+  FV YLY K+   + +HKAYGKFG
Sbjct:   39 VRDEMNEFVNTVKHAVNEAESASNKKDVVDLGQSLAMLEKKFSSLRSALAQELGAKAPNLASNNAVAKELMDKSTNLVQGVVTQREELRRLSSDVKQVDSAIRALXXXXXXXXXXXXXXXXXXXXXXVSHNEMSAVHDEAKEKLKEVVADAHHMAQTSTHSLLYILVAAEVAGFVLYLYVKRPASSFAHKAYGKFG 234          
BLAST of Gvermi7935.t1 vs. uniprot
Match: A0A1X6NRB3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRB3_PORUM)

HSP 1 Score: 64.3 bits (155), Expect = 1.530e-8
Identity = 49/161 (30.43%), Postives = 81/161 (50.31%), Query Frame = 0
Query:   39 VRDRMNDFVDTMKHAVDDAEAANKKRDVVDLGQSLNLLESKFASLRSALSHELGARAPQFNSNNEVAKQIMDKSSGLVKGVVTQREELRRLSSDIKEVDS----AIRALREGLTTFEKDVGELHRIIADLHVSHNEMSSVHEETKE--KLKEVVADAHQMA 193
            V D    FV+ +++ + D  AA+ KRDVVDLGQSL+LL+SKF  L+  L  ++ A A +  +   VA +       L + V T+   LR ++ ++ ++ +    A+  + + +T  EK V EL +    L   HNE+  +    K       V+ + H  A
Sbjct:   93 VHDDYESFVEGVENVMTDQRAASSKRDVVDLGQSLHLLDSKFEHLKQGLYEQIAAAASRKGNKASVAAE----GRALAQKVKTKYTNLRTVAREVLDILAKNARAVDQVGDTMTGLEKVVVELQK---HLEKHHNEVIELGSSVKRLHDSSHVLMETHSSA 246          
The following BLAST results are available for this feature:
BLAST of Gvermi7935.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
S0F2U0_CHOCR7.060e-7655.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IU64_9FLOR3.990e-7461.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NRB3_PORUM1.530e-830.43Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 219..234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 199..218
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..198
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 196..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:177740..178444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7935.t1Gvermi7935.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 177740..178444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7935.t1 ID=Gvermi7935.t1|Name=Gvermi7935.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=235bp
MLPSPIRVALLLLLFQACASRTRADYDAQTGASQQQQQVRDRMNDFVDTM
KHAVDDAEAANKKRDVVDLGQSLNLLESKFASLRSALSHELGARAPQFNS
NNEVAKQIMDKSSGLVKGVVTQREELRRLSSDIKEVDSAIRALREGLTTF
EKDVGELHRIIADLHVSHNEMSSVHEETKEKLKEVVADAHQMARTGTHWV
LYLIIILELGAFVSYLYFKKSGGALSHKAYGKFG*
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