Gvermi7932.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7932.t1
Unique NameGvermi7932.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length211
Homology
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BLAST of Gvermi7932.t1 vs. uniprot
Match: A0A2V3IRC6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRC6_9FLOR)

HSP 1 Score: 294 bits (752), Expect = 9.690e-99
Identity = 150/206 (72.82%), Postives = 178/206 (86.41%), Query Frame = 0 
Query:    1 MCEKHTVQVGQVVAVETGKGLVDLARISAISSSGDTVDITLLEQFVKEMYVESKQPPTYQRVENIRPIVSEYVPSQQGWVILNQDLQNAKKYFEQRAKSGV-KQRTVEVTAAPPAQLSEDALKRQIFTPTRAQAFSAAALSLPLSALCYSAFAAVRQTYQANPAGDDFLSGQVSRNLVLFTTAAASVSALVVGSALFLYALSKGDK 205
            MCEK  +QVGQVVAVET +GLVD+AR++ +SSSGDTVDI +LE+FVKEMYVESKQ PTY+R+EN+RP++SEYVPSQQGW++LNQDLQ AK YFEQRA SG  K+RTVEVTA PP +L+ +AL+RQ FTP+++QAF  AALS+PLSALCYSAFA  RQTYQANPAG+D LSGQ+ R LVL  TAA SVSALVVG AL LYALSK ++
Sbjct:    1 MCEKTVIQVGQVVAVETARGLVDIARVTGMSSSGDTVDILVLEEFVKEMYVESKQSPTYERIENVRPVISEYVPSQQGWIVLNQDLQTAKNYFEQRALSGAPKERTVEVTAPPPRELNAEALERQYFTPSKSQAFFGAALSVPLSALCYSAFAGARQTYQANPAGEDLLSGQIFRKLVLLVTAAGSVSALVVGCALLLYALSKTEE 206
The following BLAST results are available for this feature:
BLAST of Gvermi7932.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRC6_9FLOR9.690e-9972.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 157..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 201..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..200
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 178..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:124442..125074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7932.t1Gvermi7932.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 124442..125074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7932.t1 ID=Gvermi7932.t1|Name=Gvermi7932.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=211bp
MCEKHTVQVGQVVAVETGKGLVDLARISAISSSGDTVDITLLEQFVKEMY
VESKQPPTYQRVENIRPIVSEYVPSQQGWVILNQDLQNAKKYFEQRAKSG
VKQRTVEVTAAPPAQLSEDALKRQIFTPTRAQAFSAAALSLPLSALCYSA
FAAVRQTYQANPAGDDFLSGQVSRNLVLFTTAAASVSALVVGSALFLYAL
SKGDKDDLKT*
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