Gvermi7930.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7930.t1
Unique NameGvermi7930.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length378
Homology
BLAST of Gvermi7930.t1 vs. uniprot
Match: A0A2V3IRC8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRC8_9FLOR)

HSP 1 Score: 408 bits (1049), Expect = 1.080e-138
Identity = 225/348 (64.66%), Postives = 273/348 (78.45%), Query Frame = 0
Query:   33 RRPLTANINDTTDRSREDEIAAKIARFRKLKRLQSQSSGIPDDDNLPETQSSPSAEQQQKQVEQLQAFNELPAWKREQILKSQIEEAEQFFNKGSSLPS---TPDSKQSKASQPGYQPKVSTWGVFPRPENISRTFGGGRRIKKGGVDLESDESKARDEAVRKRLEAYRKAKGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSRLGGKVFLSLAFAYETVGRREDARKIYIRLRSSPFAEISSKAKQLALGFEAMQELGIEDITEKTGYRVTRFSLPDMNAQVEKRYETVVAHRDAIDNKTEKISLATNIALVSLMTSPLLLLLILEWLKR 377
            RRPL ANIN+TTD  R DEIAAKIAR RK  RL+SQ    P + N     +S ++EQ+  +      F++LP WK+E IL +QI EAE+FFNKGS++ S   T  S Q++  +  YQPKVSTWGVFPRPENISRT+GGGRRIK GGVDLES+ESKARDEAV+KRLEAYR  +GID++KE++HRE+IE AL ES  LMK+SLPY AI  L+SV +FTS RSRLGGKV L+LA AYE VGRREDA+K Y+ LR++PF EISSKAKQL  GF+AM++LGIED T+K GYRV RFSLPD+NA VEKRYETVV H D +D++TEKISL TN+AL++LM  P+LLLL LE  +R
Sbjct:   28 RRPLQANINETTDPVRGDEIAAKIARLRKQNRLKSQR---PQETNSSAADASQTSEQK-TETSFPHHFSDLPDWKKEDILNNQISEAEKFFNKGSTVESFSETKGSTQAELDETDYQPKVSTWGVFPRPENISRTYGGGRRIKSGGVDLESEESKARDEAVKKRLEAYRATRGIDMKKEDEHREKIESALNESANLMKKSLPYKAINMLESVTEFTSDRSRLGGKVLLALALAYEAVGRREDAKKTYMCLRTNPFTEISSKAKQLLQGFQAMEQLGIEDETQKKGYRVMRFSLPDVNAGVEKRYETVVRHEDQVDSETEKISLGTNLALIALMGGPVLLLLFLELWRR 371          
BLAST of Gvermi7930.t1 vs. uniprot
Match: A0A7S0ZBI5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBI5_9RHOD)

HSP 1 Score: 203 bits (517), Expect = 9.530e-59
Identity = 123/299 (41.14%), Postives = 186/299 (62.21%), Query Frame = 0
Query:   39 NIN-DTTDRSREDEIAAKIARFRKLKRLQSQSSGIPDDDNLPETQSSPSAEQQQKQVEQLQAFNELPAWKREQILKSQIEEAEQFFNKGSSLPSTPDSKQSKASQPGYQPKVSTWGVFPRPENISRTFGGGRRIKKGGVDLESDESKARDEAVRKRLEAYRKAKGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSRLGGKVFLSLAFAYETVGRREDARKIYIRLRSSPFAEISSKAKQLALGFEAMQELGIEDITEKTGYRVTRFSLPDMNA-QVEKRYET 335
            NIN D +   REDEIA KIA   KLK+ + ++SG  +   +    SS S                LP WK+E++L+++++ AE+F  KG  +               ++PKVSTWGV+PRPENIS+T+GGG+ I  GG  +  +E + ++EA RK L +YR++ GIDV  E++HR+EI+ A+E S +LM ++ P++AI+ L+SV ++ S +S+LGG+VFL+LA   E  GR E+A+++Y  LR SP A  + KAKQL+ GF+AM++L ++   E    +V  F LPD+ A     RY+T
Sbjct:   43 NINRDDSLSQREDEIAQKIA---KLKKNRIETSGKSNSSKVVSDSSSDS----------------LPEWKQEELLEAEMKRAEEFM-KGPGI---------------HKPKVSTWGVYPRPENISKTYGGGKNIPIGGKKVSDEEQQKKEEATRKLLNSYRESAGIDVRLEDEHRDEIQAAIERSKQLMLKTRPFEAIKELESVTEYVSLKSQLGGEVFLNLAMTLEVCGRNEEAKELYAELRKSPIAYYAQKAKQLSFGFKAMEDLRVDSTREVL--KVMDFELPDVAALSTRNRYDT 304          
BLAST of Gvermi7930.t1 vs. uniprot
Match: A0A5J4Z1S6_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1S6_PORPP)

HSP 1 Score: 199 bits (506), Expect = 1.450e-56
Identity = 111/232 (47.84%), Postives = 151/232 (65.09%), Query Frame = 0
Query:  107 KREQILKSQIEEAEQFFN---KGSSLPSTPDSKQSKASQPGYQPKVSTWGVFPRPENISRTFGGGRRIKKGGVDLESDESKARDEAVRKRLEAYRKAKGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSRLGGKVFLSLAFAYETVGRREDARKIYIRLRSSPFAEISSKAKQLALGFEAMQELGIEDITEKTGYRVTRFSLPDMNAQVEKRYET 335
            K E +L  ++  AE F +    G++  S PD K      P +QPKVSTWGVFPRP+NIS  +GGG+ +  GGVDL ++E   + E  RK+L AYRKA GIDVEKEE+HREEI+  L+ +  ++ +S PY+A+E L+SV+ + S  SRLGG V+L LA   E +G  E AR++Y  LR SP+++I SK KQLA GF+AM  L ++  T + G +V  F LPD  A    RY+T
Sbjct:  133 KLEDVLLQEMRAAEAFMSGASSGTAKASAPDDK------PFHQPKVSTWGVFPRPKNISSAYGGGKNLPTGGVDLSNEEELKKQEETRKKLAAYRKAMGIDVEKEEEHREEIKAKLDLARVMVFKSRPYEAVEALESVLDYVSPLSRLGGDVYLELALTNEILGNSERARELYGELRRSPYSDIRSKVKQLAFGFQAMDALKVD--TSREGLKVMDFKLPDFAALTPDRYDT 356          
BLAST of Gvermi7930.t1 vs. uniprot
Match: R7QL93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL93_CHOCR)

HSP 1 Score: 191 bits (484), Expect = 3.710e-54
Identity = 117/249 (46.99%), Postives = 157/249 (63.05%), Query Frame = 0
Query:    3 VYLHSAAFIQSPLSITAQRFKRSSTCAHRARRPLTANINDTTDRSREDEIAAKIARFRKLKRLQSQSSGIPDDDNLPETQSSPSAEQQQKQVEQLQAFNELPAWKREQILKSQIEEAEQFFNKGSSLPST-PDSKQSKASQPGYQPKVSTWGVFPRPENISRTFGGGRRIKKGGVDLESDESKARDEAVRKRLEAYRKAKGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSR 250
            VY+ S  F+ S  S      KRSS    R   P  ANIN T+D +REDEIAAKIA  RK KRL+SQ S          T +   A  Q++ V    +F +LP WK+E I+++QI EAE F N  +  P   P + + K     Y+PKVSTWGVFPRP+NIS+ FGGG++++ GGVDL S+ SK RDEAV+++L  YRK +GID+E+EE+HREEIE AL + +  ++ S P  AI+ L+ VV++   R R
Sbjct:   72 VYVMSLFFVHS--SALRLSHKRSSPLTCRRTSPY-ANINQTSDSAREDEIAAKIANLRKQKRLKSQGSSS--------TGNQDEANTQRRNVGTPMSFQDLPDWKKEDIMQNQISEAEAFLNPSAHKPHVKPGTDKVK-----YKPKVSTWGVFPRPDNISKAFGGGKKVQPGGVDLSSEGSKKRDEAVKEKLAMYRKTRGIDLEREEEHREEIETALAKGEGFIRMSRPQQAIKALEPVVEYICDRQR 304          
BLAST of Gvermi7930.t1 vs. uniprot
Match: A0A7S0T4K8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4K8_9RHOD)

HSP 1 Score: 178 bits (452), Expect = 8.550e-50
Identity = 93/194 (47.94%), Postives = 135/194 (69.59%), Query Frame = 0
Query:  145 YQPKVSTWGVFPRPENISRTFGGGRRIKKGGVDL--ESDESKARDEAVRKRLEAYRKAKGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSRLGGKVFLSLAFAYETVGRREDARKIYIRLRSSPFAEISSKAKQLALGFEAMQELGIEDITEKTGYRVTRFSLPDM-NAQVEKRYET 335
            ++PKVSTWGVFPRP+NIS+ +GGGR I +GG+    E++E + + +  +  L++YR A GID ++EEQHRE +  A+ +S +L+K S PY+A+  L+SV ++ S +S LGG++ + LA A E VGR EDAR++Y  LR SP + I+SKAKQL+ GF AMQEL + D     G +V  F+LPD+      +RY+T
Sbjct:   54 HKPKVSTWGVFPRPDNISKAYGGGRTIPRGGLQPREETEEDRKKAQRTKALLDSYRTAMGIDTKREEQHRETVLEAIAKSRKLLKDSRPYEAVRLLESVKEYVSTKSELGGELHMELALALEVVGRTEDARELYAELRKSPVSRIASKAKQLSFGFSAMQELKL-DSDGGAGLKVMDFNLPDLAKLSTARRYDT 246          
BLAST of Gvermi7930.t1 vs. uniprot
Match: A0A7S4PEZ1_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PEZ1_GUITH)

HSP 1 Score: 145 bits (366), Expect = 1.920e-36
Identity = 84/234 (35.90%), Postives = 132/234 (56.41%), Query Frame = 0
Query:  108 REQILKSQIEEAEQFFNKGSSLPSTPDSK------QSKASQPGYQPKVSTWGVFPRPENISRTFGGGRRIKKGGVDLESDESKARDEAVRKRLEAYRKAKGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSRLGGKVFLSLAFAYETVGRREDARKIYIRLRSSPFAEISSKAKQLALGFEAMQELGIEDITEKTGYRVTRFSLPDMNAQVEKRYET 335
            +E+  + ++E A+Q  +K  S P    +        S      ++PKVSTWGV+ RP +IS+ +GGGR+I  GG     +E +       K+L  YRK+ G+D + EE+H EEI+ AL   D+ M       A++ L+ V ++TS ++ +GG+V+L+LA AYE +G R  A+  Y +L  +    +SSKAK+L  GFEAM+ L +     +   +V  F LP++     KRY+T
Sbjct:   85 KEEERRRKLERAQQIISKVRSEPQVERTSGIGGAWSSPEEVESHKPKVSTWGVYERPADISKAYGGGRKIGLGGYTQSEEEREESTAKTMKKLMEYRKSVGVDRKLEEEHMEEIKQALALYDKHMSSGAVSRAVKALEDVTKWTSFKTTVGGQVYLNLALAYEQMGERPKAKSTYTKLVGNGDPNVSSKAKELLYGFEAMEFLRVNATVRQEERKVMNFKLPEVWEYTNKRYDT 318          
BLAST of Gvermi7930.t1 vs. uniprot
Match: A0A7S0UDJ1_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UDJ1_HEMAN)

HSP 1 Score: 138 bits (348), Expect = 7.120e-34
Identity = 75/213 (35.21%), Postives = 120/213 (56.34%), Query Frame = 0
Query:  145 YQPKVSTWGVFPRPENISRTFGGGRRIKKGGVDLESDESKARDEAVRKRLEAYRKAKGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSRLGGKVFLSLAFAYETVGRREDARKIYIRLRSSPFAEISSKAKQLALGFEAMQELGIEDITEKTGYRVTRFSLPDMNAQVEKRYETVVAHRDAIDNKTEKISLATNIA 357
            ++PKV TWGV+ RP +I + +GGGR+I   G     +E  A      + L  YR   G+D  KE +H +EI  ALE  ++ M+      A+E L++V ++TS+ + LGGKV+L+LA AYE  G R+ A++ Y +L ++    IS+KA++L  GFEAM+ + +     K   +   F LPD  +  +K+Y+     ++A D +    +    IA
Sbjct:   22 HKPKVGTWGVYERPADILKAYGGGRKIGVDGFKPSQEEQDAMSAKTAQMLAEYRAKAGVDRTKERKHEKEINEALELHNQYMRNIALSRAVEVLENVTEYTSYGTLLGGKVYLNLALAYEAQGERQKAKRTYTKLLNNGDNFISTKARELLYGFEAMEFMNVNTTFSKEERKTMNFRLPDFASYSKKKYDMTYYDKEAADQRARMAAADRRIA 234          
BLAST of Gvermi7930.t1 vs. uniprot
Match: A0A7S2YC46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YC46_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.980e-33
Identity = 73/168 (43.45%), Postives = 104/168 (61.90%), Query Frame = 0
Query:  136 KQSKASQPGYQPKVSTWGVFPRPENISRTFGGGRRIKKGGVDLESDESKARD-EAVRKRLEAYRKAKGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSRLGGKVFLSLAFAYETVGRREDARKIYIRLRSSPFAEISSKAKQLALGFEAMQ 302
            +   A +  Y+PK  +WG FPRP +IS+ +GGGRR+   G    ++E+K +  E+ R+RL+ YR+  GIDVE E++H +EIE AL+     M+R +   A+  L+ V +  S  S++GGKVFL LA AYE VGR  +A K+Y  L  S   +I   AK+L  G EAMQ
Sbjct:   38 RNETAPEEMYKPKTGSWGAFPRPRDISKAYGGGRRV---GPGYSNEEAKLKSQESTRERLKKYREKVGIDVESEKEHADEIEEALKIGSLAMQRGMYSTAVSALEKVTKHCSTNSKVGGKVFLELAMAYEAVGRTPEAIKVYSVLSRSRMEDIKFDAKRLLYGIEAMQ 202          
BLAST of Gvermi7930.t1 vs. uniprot
Match: B7FZN1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FZN1_PHATC)

HSP 1 Score: 130 bits (326), Expect = 2.530e-29
Identity = 71/170 (41.76%), Postives = 102/170 (60.00%), Query Frame = 0
Query:  134 DSKQSKASQPGYQPKVSTWGVFPRPENISRTFGGGRRIKKGGVDLESDESKARDEAV-RKRLEAYRKAKGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSRLGGKVFLSLAFAYETVGRREDARKIYIRLRSSPFAEISSKAKQLALGFEAMQ 302
            D  ++ A+Q  YQPK+ +WG FPRP +IS+ +GGGRRI   G    +++++    A  R+RL+ YR+  GI+VE E+ H +EI  AL      M+R +   A+  L+ V ++ S  S++G KVFL LA AYE VGR E+A  +Y  L      +I   AK+L  G EAMQ
Sbjct:  322 DRNETAATQDVYQPKMGSWGAFPRPRDISKAYGGGRRI---GPGFSNEQARVESTAATRERLQRYREKVGIEVESEKLHADEIAEALRIGSLAMERGIYSTAVSALEKVTRYCSSNSKVGSKVFLELAMAYEAVGRTEEAIAVYTTLSKCRMEDIKHNAKRLLYGLEAMQ 488          
BLAST of Gvermi7930.t1 vs. uniprot
Match: K0R6F8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R6F8_THAOC)

HSP 1 Score: 129 bits (325), Expect = 3.440e-29
Identity = 81/208 (38.94%), Postives = 113/208 (54.33%), Query Frame = 0
Query:  145 YQPKVSTWGVFPRPENISRTFGGGRRIKKGGVDLESDESKARD--EAVRKRLEAYRKAKGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSRLGGKVFLSLAFAYETVGRREDARKIYIRLRSSPFAEISSKAKQLALGFEAMQ----ELGIEDITEK----TGYRVTRFSLPDMNAQVEKRYETVVAHRDA 342
            YQPKV TWG FPRP NIS  +GGG+R+   G D+ +DE K ++  E+ ++RL AYR+  GI V+ E  ++E I+ AL  + R M R      +  L+ V Q+ S +S+LGGKVFL LA AYE  G+ + A  +Y  L  SP  +I   A +L  G EAM     E  +++ + K    T    T F     N +  K Y T     D+
Sbjct:  334 YQPKVGTWGAFPRPRNISTAYGGGKRV---GADVRTDEKKRQESIESTKERLRAYRERMGIVVQSEIDNKEIIDEALALAGRAMLRGSYSVGVSALEKVTQYCSTKSKLGGKVFLELAMAYEAEGKTDQAIGLYAALTKSPIEQIKMNADKLLYGLEAMNFMRNEAKLKEFSRKNAAATFIDATGFGEISKNFEDSKIYNTAYVDLDS 538          
The following BLAST results are available for this feature:
BLAST of Gvermi7930.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRC8_9FLOR1.080e-13864.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0ZBI5_9RHOD9.530e-5941.14Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z1S6_PORPP1.450e-5647.84Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
R7QL93_CHOCR3.710e-5446.99Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0T4K8_9RHOD8.550e-5047.94Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S4PEZ1_GUITH1.920e-3635.90Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S0UDJ1_HEMAN7.120e-3435.21Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S2YC46_9STRA2.980e-3343.45Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
B7FZN1_PHATC2.530e-2941.76Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
K0R6F8_THAOC3.440e-2938.94Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 205..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..147
NoneNo IPR availablePANTHERPTHR35482CYTOCHROME C OXIDASE SUBUNITcoord: 126..373
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 356..375
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 376..377
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..355
NoneNo IPR availableTMHMMTMhelixcoord: 350..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:121099..122232 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7930.t1Gvermi7930.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 121099..122232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7930.t1 ID=Gvermi7930.t1|Name=Gvermi7930.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=378bp
MQVYLHSAAFIQSPLSITAQRFKRSSTCAHRARRPLTANINDTTDRSRED
EIAAKIARFRKLKRLQSQSSGIPDDDNLPETQSSPSAEQQQKQVEQLQAF
NELPAWKREQILKSQIEEAEQFFNKGSSLPSTPDSKQSKASQPGYQPKVS
TWGVFPRPENISRTFGGGRRIKKGGVDLESDESKARDEAVRKRLEAYRKA
KGIDVEKEEQHREEIEHALEESDRLMKRSLPYDAIECLQSVVQFTSHRSR
LGGKVFLSLAFAYETVGRREDARKIYIRLRSSPFAEISSKAKQLALGFEA
MQELGIEDITEKTGYRVTRFSLPDMNAQVEKRYETVVAHRDAIDNKTEKI
SLATNIALVSLMTSPLLLLLILEWLKR*
back to top