Gvermi788.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi788.t1
Unique NameGvermi788.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length389
Homology
BLAST of Gvermi788.t1 vs. uniprot
Match: A0A2V3IT05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 137 bits (346), Expect = 3.740e-33
Identity = 101/301 (33.55%), Postives = 147/301 (48.84%), Query Frame = 0
Query:    1 MVLIPLKSQFTDLIITIFSGVAEFFLFSAALCVNKYAECHALKNGKQVKVRLHRIRTKSLGIISIVVFITLEVLLSFFSNPERSRRVEFRPCLSINRYDLRKNDLTPSLDMDKILIRCTRQDGDQIFQHTGNLSRIDEND---IRCSETPLFMFKEDSSIEIPIGDRRRTCNND----FGCIF-----------------------TEFRSRTFYMSIALGLNDVDKVIASNIPISFYATKFFLDIDEKEQVTIAERALDAIRGAASPDSLEARRYFMLGTEEMSCPF-FSFDDVTSKPIG 270
            MV IPLKSQF  LI+T+ SG+AE FLF A L  NKY+EC AL+ G+QV VRLHRIR K L ++++VVFI LEV++SFFS+P    +     CL+++R DLR+     + D D ILIRC     D   Q  GN S ++ N    +RC +  L+ +  +  ++  + +  RT   D      CI                                Y+S A+  ++V  ++   + I F  T    +     +   A R L A     + D +E R+   +G E   C F     D+T+ P+G
Sbjct:    1 MVEIPLKSQFVSLIVTLISGLAELFLFGALLGFNKYSECIALRKGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDLREGFTGDTNDEDFILIRCIGIKKDGFLQRAGNFS-LNPNTKARVRCGKHALYEYPNEDDLQFTLTNVTRTGGTDTDLVLECILPTPAVGEKPPTERLCAAVRQLPPNSIGFTNVYLSAAVRESEVGPLVNQQVVIPFLETSVRYNTSGLSR-NFARRLLRAYDKDVT-DPMEIRKRVFMGIERRKCAFEHRKKDLTTVPLG 298          
BLAST of Gvermi788.t1 vs. uniprot
Match: A0A2V3ISI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 1.140e-27
Identity = 94/276 (34.06%), Postives = 136/276 (49.28%), Query Frame = 0
Query:    1 MVLIPLKSQFTDLIITIFSGVAEFFLFSAALCVNKYAECHALKNGKQVKVRLHRIRTKSLGIISIVVFITLEVLLSFFSNPERSRRVEFRPCLSINRYDLRKNDLTPSLDMDKILIRCTRQDGDQIFQHTGNLSRIDENDIRCSETPLFMFKEDSSIEIPIGDRRRT-CNNDFG---CIFTEFR-SRTFYMSIALGLNDVDKVIASNIPISFYATKFFLDIDEKEQVTIAERALDAIRGAASPDSLEARRYFMLGTEEMSCPFFSFDDVTSKPIGY 271
            MVLIPLKSQ+T LI TI SG+AE  L SA L  NKY EC AL+NG +V VR HR RT++L + + + F+ LEV  SFFS+P   R    + C+S++   +R+  L  SL    + I C   +   ++Q  GN+S  D+ +I+C +  LF      S   P+ D     C  D     C F     S   +  I L   D+  V+ +N  +  + T  + +    E+  +  R++   R   + D    RR    G EE  C F  F   T+   G+
Sbjct:    1 MVLIPLKSQYTSLIATILSGLAELALLSAVLGYNKYLECRALENGGRVNVRHHRFRTRALTVAATLAFVFLEVSNSFFSDPALKRGEVTKSCISLDALPIRRGMLDISLRAAVVGINCLGTNTSLLWQLAGNIS--DDGEIKCGDDFLFSADIHHSPNEPVPDEHTMECILDGELNLCAFLYSNGSEVTFTEIVLD-TDLSFVLDNNYALRVWKTTVYYNTTGMER-ELLRRSITLARDLVT-DQFVLRREVFAGAEETECNFDVFSPATTIKEGF 271          
BLAST of Gvermi788.t1 vs. uniprot
Match: A0A2V3J5C2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 120 bits (301), Expect = 4.790e-27
Identity = 84/282 (29.79%), Postives = 137/282 (48.58%), Query Frame = 0
Query:    1 MVLIPLKSQFTDLIITIFSGVAEFFLFSAALCVNKYAECHALKNGKQVKVRLHRIRTKSLGIISIVVFITLEVLLSFFSNPERSRRVEFRPCLSINRYDLRKNDLTPSLDMDKILIRCTRQDGDQIFQHTGNLS---------RIDENDI-RCSETP-LFMFKEDSSIEIPIGDRRRTCNNDFGCIFTEFRSRTFYMSIALGLNDVDKVIASNIPISFYATKFFLDIDEKEQVTIAERALDAIRGAASPDSLEARRYFMLGTEEMSCPFFSFDDVTSKPIGY 271
            MVLIPLKSQ+T LI+T+ SG+AE  L SA L  NKY EC AL+NG +V VR HR RTK+L + + + F+ LEV  SF+S+P+    +  + C S++   +++  L  S     + ++C   +    +QH GN+S          I ++++  C +   L+    + + + P+ D          C+F          +  +   DV +V+  +I +  + T    ++   E    A RA+D +    + D    RR    G+    C F +F D T    G+
Sbjct:    1 MVLIPLKSQYTSLIVTVISGIAELALLSAVLVFNKYLECRALQNGGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLDALTVQQGLLNISTQTTVVGVKCIGINSTLFWQHAGNISDGRNIGNGGNIGDDEVFECEKKEVLYTANVERAPDEPVPDEYVVGCVGTSCVFVYRSGNEVTFTDFVHSEDVSRVLNESITLPVWKTTISYNVTGLESA-FATRAVDLLSQGVT-DGFTLRRGVFAGSAITQCNFKTFSDATRVRKGF 280          
BLAST of Gvermi788.t1 vs. uniprot
Match: A0A2V3IMC1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC1_9FLOR)

HSP 1 Score: 109 bits (272), Expect = 3.600e-23
Identity = 86/275 (31.27%), Postives = 138/275 (50.18%), Query Frame = 0
Query:    1 MVLIPLKSQFTDLIITIFSGVAEFFLFSAALCVNKYAECHALKNGKQVKVRLHRIRTKSLGIISIVVFITLEVLLSFFSNPERSRRVEFRPCLSINRYDLRKNDLTPSLDMDKILIRCTRQDGDQIFQHTGNLSRIDENDIRCSETPLFMFKEDSSIE---IPIGDRRRTCNNDFGCIFTEFRSRTFYMSIALGLNDVDKVIAS---NIPISFYATKFFLDIDEKEQVTIAERALDAIRGAASPDSLEARRYFMLGTEEMSCPFFS-FDDVTSKP 268
            MV I LK+Q+  LIITI S + E    +A   VN   EC  LK  KQ++VR +R R K + +IS ++F+ LE+++SFFS+P +    +  PC+S++     +       + D I  +C    G+  +   GN+S + +  +RCS+   + +   S+ E   +P+     +C  +  C+F   +  + Y S AL L D+   + S   +  ++F  T+   D  E   V  A RA+DA     + D  E RR   LG+ + +CPF     D TS P
Sbjct:    1 MVTIALKAQYVSLIITIISFICEVIFIAALQTVNSIRECQLLKQKKQLRVRNYRHRAKIIALISALLFLGLEIIVSFFSDPVQLELFQSEPCVSVDNVLRLQGPQGEFREADFIEGKCQTLRGNFNYVRVGNVS-LSDGQVRCSKKAAYFYDIVSASETKKLPVSTAEVSCKGET-CVFVFEQQNSTYFSGAL-LPDIVAELRSGAVDTEMAFLKTELLFDSSEMLPV-FAGRAVDAFLEQVN-DPFELRRRVFLGSAKKNCPFVEEVIDGTSVP 270          
The following BLAST results are available for this feature:
BLAST of Gvermi788.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IT05_9FLOR3.740e-3333.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISI7_9FLOR1.140e-2734.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C2_9FLOR4.790e-2729.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMC1_9FLOR3.600e-2331.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..388
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:274634..284875 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi788.t1Gvermi788.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 274634..284875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi788.t1 ID=Gvermi788.t1|Name=Gvermi788.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=389bp
MVLIPLKSQFTDLIITIFSGVAEFFLFSAALCVNKYAECHALKNGKQVKV
RLHRIRTKSLGIISIVVFITLEVLLSFFSNPERSRRVEFRPCLSINRYDL
RKNDLTPSLDMDKILIRCTRQDGDQIFQHTGNLSRIDENDIRCSETPLFM
FKEDSSIEIPIGDRRRTCNNDFGCIFTEFRSRTFYMSIALGLNDVDKVIA
SNIPISFYATKFFLDIDEKEQVTIAERALDAIRGAASPDSLEARRYFMLG
TEEMSCPFFSFDDVTSKPIGYPRHSCRNYPVGHQRAVLAGLERWQSWDEF
STFFTFSSGSASNCINFPTIKNDPTPPDPSFLHPSYNAGDLKKVHDGISS
PSTGHDYRLVETAQDLFLPLRLHDKCLLSSGLIRPLWS*
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