Gvermi786.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi786.t1
Unique NameGvermi786.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length477
Homology
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A2V3J3F1_9FLOR (Putative RNA-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3F1_9FLOR)

HSP 1 Score: 631 bits (1627), Expect = 6.730e-223
Identity = 371/505 (73.47%), Postives = 388/505 (76.83%), Query Frame = 0
Query:    1 MATLHPPQVDGTPSRDQEPSEKWSAHDAPTNPPXXXXXXXXXXXXXXXXXXXXXXXKSSNPQTPDPPNVPSALYEQQQRAFXXXXXXXXXXXXXXXQPSPPST-----------SAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTS-APGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRRHNRDSYNQGGGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYYSNYPASLAEQYGAYYNNPQWQQYYAAMGYNFNFPQSYNPYQQYLQAYMSTQASANGVGGSAGMPANAASPNAPGAGGYDNAHGSGRY--GGXXXXXXXXXXGPS---------------LRRSSRRDDRYHPYR 476
            MATLHPPQVDGTP+ DQ+P EKW+  DAP + P         XXXXXXXXXXXXXX           NVPSALYEQQQRAF               +P PPS            SAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADE+AATAAASRRHDLDGRQVEAKRAVPRSEGSS S APGH+ SF AAPRGQR+++ A    PHRAHHTTKCKVFVGGLPSGCGG+EFR YFS+FGEV+DAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKG SQDRRHNRDSYNQG GRA                 XXXXXXXXXXXAYYSNYPASLAEQYGAYYN+PQWQQYYAAMGYNFNFPQSYNPYQQYLQAYM+TQASANG GGSA MPANAASPNAPGAGG+DN+H   RY  GG          GP                 RRSSRRDDRYHPYR
Sbjct:    1 MATLHPPQVDGTPTPDQDPPEKWTPRDAPPDAPVNPDDYPNIXXXXXXXXXXXXXXXXXXXXXXXXXNVPSALYEQQQRAFHDQQHQYSQ------RPVPPSXXXXXXXXXXXXSAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEDAATAAASRRHDLDGRQVEAKRAVPRSEGSSASTAPGHNPSFPAAPRGQRYND-APGAPPHRAHHTTKCKVFVGGLPSGCGGEEFRAYFSQFGEVIDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGVSQDRRHNRDSYNQGAGRAGASASQNDGLPHSGANGXXXXXXXXXXXAYYSNYPASLAEQYGAYYNSPQWQQYYAAMGYNFNFPQSYNPYQQYLQAYMNTQASANGTGGSAAMPANAASPNAPGAGGFDNSHVPARYRGGGGGHGGDMGHGGPQNGHXXXXXXXXXXXXSRRSSRRDDRYHPYR 498          
BLAST of Gvermi786.t1 vs. uniprot
Match: R7QHG3_CHOCR (Putative Heterogeneous nuclear ribonucleoprotein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHG3_CHOCR)

HSP 1 Score: 417 bits (1072), Expect = 1.830e-138
Identity = 312/553 (56.42%), Postives = 334/553 (60.40%), Query Frame = 0
Query:    1 MATLHPPQVDGTP---------SRDQE-PSEKWSAHDAPTNPPXXXXXXXXXXXXXXXXXXXXXXXKSSN---------------PQTPDPPNV--PSALYEQQQRAFXXXXXXXXXXXXXXXQ---------PSPPS-----------TSAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRRHNRDSYNQGGGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAY--YSNYPASLAEQYGAYYNNPQWQQYYAAMGYNFN-FPQSYNPYQQYLQAYMSTQASANGVGGSAGMPANAASPNAP------------GAGGYDNAHG-SGRYGGXXXXXXXXXX--------------GPSLRRSSRRDDRYHPYR 476
            MATLHPP VDG           S D   P + W +  A  + P                         SN               PQ P  P     +ALY+QQQ+        XXXXXXXXX          P+PP+           + AG KIFVGGLSWET E+SLR YFEQIGTV DCVIMRDRHTGHPRGFGFVTFAD++AA AAASRRHDLDGRQVEAKRAVPR+EG                                AHHTTKCKVFVGGLPS CG DEFR YFS+FGEVVDAQVMIDHNTGNSRGFGFVTF +EATVN+VVGPGKSNTDHEIMGKCVEVKRAEPKGA  DRR+NRD+Y       XXXXXXXXXXXXXXXXXXXXXXXXXXXX    YSNYPASLAEQYGAYYN+PQWQQYYAAMGYNFN +PQ YNPYQQYLQAYM+  A                                 G  GYDN  G +GRYGG  XX   XXX              GP  RRSSRRDDRYHPYR
Sbjct:    1 MATLHPPTVDGPSPTAAAPEPRSADPPAPDQNWPSDSADPSAPAPTDNSEQVKGEDEILYGQSAQASQSNHIPQSQHSGDPSQPNPQQPSDPTALAAAALYQQQQQLHSQQSQPXXXXXXXXXMQHQDPSGQAPAPPNPNQGPAGPSSNSGAGSKIFVGGLSWETGEESLRRYFEQIGTVTDCVIMRDRHTGHPRGFGFVTFADDDAAGAAASRRHDLDGRQVEAKRAVPRNEG--------------------------------AHHTTKCKVFVGGLPSSCGPDEFRAYFSQFGEVVDAQVMIDHNTGNSRGFGFVTFGSEATVNSVVGPGKSNTDHEIMGKCVEVKRAEPKGAPNDRRNNRDNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSNYPASLAEQYGAYYNSPQWQQYYAAMGYNFNAYPQGYNPYQQYLQAYMNNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSGYDNNQGGAGRYGGGAXXDIAXXXXXXXXXXXXXXXXPGPGSRRSSRRDDRYHPYR 521          
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A7S2ZPG2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZPG2_9RHOD)

HSP 1 Score: 207 bits (528), Expect = 1.660e-58
Identity = 113/229 (49.34%), Postives = 144/229 (62.88%), Query Frame = 0
Query:  108 KIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSE-------GSSTSAPGHSASFTAAPRGQRFSEGASQGAPHR-----AHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRRHNRDSYNQG 324
            K+FVGGLSWETDE S+R YFEQ G V DC+IMRDRHT HPRGFGFV++ +   A    + +H LDGRQV+AK AVPRS+        S+T++   + SFT     ++ SE      P +     +      K+FVGGLPS C   +   YFS FGEV DAQV+IDH TGNSRGFGFVTF +EA +  + G    +  H+I+GK VEVK+AEPK + + RR   +    G
Sbjct:  103 KVFVGGLSWETDEDSMRKYFEQFGKVRDCLIMRDRHTKHPRGFGFVSYENAGDANKVTTMKHVLDGRQVDAKHAVPRSDLSTVSSIPSATNSKKSNMSFTE----KQASEAEEALGPPKDPTPASDPALSKKIFVGGLPSQCRNAQLEEYFSAFGEVADAQVLIDHKTGNSRGFGFVTFEDEAAIADLFGSSDGSAHHDILGKVVEVKKAEPKQSLESRRSRENKQTSG 327          
BLAST of Gvermi786.t1 vs. uniprot
Match: M2XIP2_GALSU (Heterogeneous nuclear ribonucleoprotein A1/A3 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XIP2_GALSU)

HSP 1 Score: 204 bits (518), Expect = 1.300e-57
Identity = 111/216 (51.39%), Postives = 136/216 (62.96%), Query Frame = 0
Query:  100 PPSTSAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRR 315
            P + +   KIFVGGLSWET E++L+ YFE  G VLDCVIMRD+HTGHPRGFGFVTF  EE+A  AA++RH+LDGRQVEAK+AVP++E                     +   +    P R       K+FVGGLP  C  ++F  YF R G VV+A +M DH TG SRGFGFVTF++E  V  V       + HEI GK VEVK+AEPK  S+ RR
Sbjct:   43 PGNQNNNSKIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRAATKRHELDGRQVEAKKAVPKAE---------------------YITRSQVTKPTR-------KIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSSEDMVEKVF----EQSQHEIKGKIVEVKKAEPKHFSEGRR 226          
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A2V3IP63_9FLOR (RNA-binding protein Musashi-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP63_9FLOR)

HSP 1 Score: 201 bits (510), Expect = 5.050e-56
Identity = 119/222 (53.60%), Postives = 138/222 (62.16%), Query Frame = 0
Query:   99 SPPSTSAGC-----KIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRR 315
            +PPS S+       K+FVGGLSWETDEQSLR YF + G+V DCVIMRDR TGHPRGFGFVT+ D+  A   A+  H+LDGRQVEAK AVPRSE      P  S                       A   TK KVF+GGLP+ C   +   +F RFG++ + QVM DH TGNSRGFGFVTF +E TV+ VV     + DHEIM K VEVKRAEPK A   RR
Sbjct:    6 NPPSNSSAQSTTHKKVFVGGLSWETDEQSLRDYFGRYGSVSDCVIMRDRLTGHPRGFGFVTYEDQLVAERVAAEFHELDGRQVEAKIAVPRSE---CVPPSRS----------------------NAWRATK-KVFIGGLPATCREADLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVV-----DIDHEIMQKHVEVKRAEPKQALDARR 196          
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A5J4Z311_PORPP (Putative RNA-binding protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z311_PORPP)

HSP 1 Score: 203 bits (517), Expect = 1.510e-54
Identity = 109/203 (53.69%), Postives = 133/203 (65.52%), Query Frame = 0
Query:  106 GCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPK 308
            G K+FVGGLSW+T E SLR+YF + G VLDCVIMRDR +GHPRGFGFVTF DE  +   A+ +H+LDGR VEAKRAVPRS+ S        A    + +G R                   K+FVGGLPS CG  EFR YFSRFGE+++  VM DH TGNSRGFGFVT+ ++  V+ V+       +HEI+GK VE+K AEPK
Sbjct:  225 GGKLFVGGLSWDTTEASLRSYFSRFGRVLDCVIMRDRVSGHPRGFGFVTFEDEAVSDHVAAEQHELDGRAVEAKRAVPRSDCSG-------AVKVPSSKGSR-------------------KLFVGGLPSACGDHEFRTYFSRFGEILELSVMFDHTTGNSRGFGFVTYYDDRAVDLVM-----QMEHEILGKRVEIKHAEPK 396          
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A7S0ZCZ9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCZ9_9RHOD)

HSP 1 Score: 195 bits (496), Expect = 3.600e-53
Identity = 104/212 (49.06%), Postives = 138/212 (65.09%), Query Frame = 0
Query:   97 QPSPPSTSAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPK 308
            +PS  +     KIFVGGLSWETDE SL++YF + GTV+D VIMRDR++GHPRGFGFVTF D+ AA   A  +H+LDGR VEAK+AVPR+E             T + R    S G+              K+FVGGLP+ C  +  + +F  +GEV++AQVM DHNTGNSRGF FVT++++++++ V+       +H +MGK VEVK AEPK
Sbjct:    6 EPSIENMMQPSKIFVGGLSWETDEISLKSYFGKYGTVIDSVIMRDRNSGHPRGFGFVTFEDDFAADRVAREKHELDGRLVEAKKAVPRAE------------CTPSTRAVTSSRGSR-------------KIFVGGLPASCDDESLKTHFMSYGEVLEAQVMYDHNTGNSRGFAFVTYSDDSSIDRVM-----EVEHFVMGKLVEVKHAEPK 187          
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A7S1EPW2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPW2_9RHOD)

HSP 1 Score: 194 bits (494), Expect = 8.820e-53
Identity = 110/216 (50.93%), Postives = 135/216 (62.50%), Query Frame = 0
Query:  106 GCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAP---------RGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGK-SNTDHEIMGKCVEVKRAEPKGAS 311
            G K+FVGGLSWET E  LR YFE+ G VLD ++MRDR TG PRGFGFVTFA E+ A   ++  H +DGRQV+A+ AVPR   + +     +A+  AA          RG   S  A  G P         K+FVGG+P        R YF RFGEVV AQ+M+DH T  SRGFGFVTFA+  +V AVVG G+ SN +HEI+G+ VEVK AEP+  S
Sbjct:   35 GVKVFVGGLSWETSEDVLRDYFERFGKVLDALVMRDRTTGKPRGFGFVTFASEDTARIVSAEPHQIDGRQVDARFAVPRGNAAQSGQHFETANPLAASGGLDGASTVRGPVPSTAAGGGGPR--------KIFVGGIPISVEDAGLREYFERFGEVVQAQIMLDHRTNKSRGFGFVTFADAQSVVAVVGAGRQSNMEHEILGRVVEVKIAEPRNRS 242          
BLAST of Gvermi786.t1 vs. uniprot
Match: A0A7S1TL02_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TL02_9RHOD)

HSP 1 Score: 190 bits (482), Expect = 4.150e-52
Identity = 107/208 (51.44%), Postives = 129/208 (62.02%), Query Frame = 0
Query:  108 KIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRR 315
            KIFVGGLSWET+E SLR YFE+ G VL+C+IMRDR TGHPRGFGFVTF D   A   A  +H+LDGR VEAK A+PR+E                P  QR +              +K KVFVGGLPS CG  E   YF  FG V++  VM DH TGNSRGFGFVTF++  +++ V+        H+I+GK VEVKRAEPK   + R+
Sbjct:   83 KIFVGGLSWETNEWSLRNYFEKFGRVLECLIMRDRSTGHPRGFGFVTFMDGTVAYRVAHEKHELDGRPVEAKLALPRNE---------------CPTPQRTN----------GSKASK-KVFVGGLPSNCGDTELHRYFQHFGTVMECLVMYDHQTGNSRGFGFVTFSDLVSIDRVM----EIEHHKILGKYVEVKRAEPKQVLESRK 260          
BLAST of Gvermi786.t1 vs. uniprot
Match: M2XNR8_GALSU (Heterogeneous nuclear ribonucleoprotein A1/A3 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XNR8_GALSU)

HSP 1 Score: 188 bits (478), Expect = 5.170e-52
Identity = 106/213 (49.77%), Postives = 129/213 (60.56%), Query Frame = 0
Query:  108 KIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGFGFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFTAAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFGEVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGASQDRRHNRDS 320
            K+FVGGLSWET E SLRAYFE  G V DCVIMRD++TGHPRGFGFVTF D+  A   AS  H LDGRQVEAK+AVP++E S+                            +    TTK K+FVGG+ S C  ++F  YF +FG V+DA +M DH TG SRGFGF+TF +   V+ V    +    H I GK VEVK AEPK  S + R  ++S
Sbjct:   32 KVFVGGLSWETGEDSLRAYFEGYGEVADCVIMRDKYTGHPRGFGFVTFQDDSVADLVASLSHILDGRQVEAKKAVPKAEVSTK---------------------------NETTKTTK-KLFVGGISSSCSDEDFLVYFQKFGAVLDAHIMYDHQTGKSRGFGFITFCSVEAVDKVFQTPR----HVIKGKVVEVKVAEPKHQSVESRKVKES 212          
The following BLAST results are available for this feature:
BLAST of Gvermi786.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3F1_9FLOR6.730e-22373.47Putative RNA-binding protein n=1 Tax=Gracilariopsi... [more]
R7QHG3_CHOCR1.830e-13856.42Putative Heterogeneous nuclear ribonucleoprotein n... [more]
A0A7S2ZPG2_9RHOD1.660e-5849.34Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XIP2_GALSU1.300e-5751.39Heterogeneous nuclear ribonucleoprotein A1/A3 n=1 ... [more]
A0A2V3IP63_9FLOR5.050e-5653.60RNA-binding protein Musashi-like n=1 Tax=Gracilari... [more]
A0A5J4Z311_PORPP1.510e-5453.69Putative RNA-binding protein n=1 Tax=Porphyridium ... [more]
A0A7S0ZCZ9_9RHOD3.600e-5349.06Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1EPW2_9RHOD8.820e-5350.93Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1TL02_9RHOD4.150e-5251.44Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2XNR8_GALSU5.170e-5249.77Heterogeneous nuclear ribonucleoprotein A1/A3 n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 227..303
e-value: 8.5E-20
score: 81.8
coord: 108..179
e-value: 1.5E-24
score: 97.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 228..284
e-value: 7.5E-15
score: 54.5
coord: 109..174
e-value: 1.3E-17
score: 63.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 226..307
score: 16.738909
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 107..183
score: 17.438179
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 204..338
e-value: 4.5E-24
score: 87.1
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 69..198
e-value: 1.3E-32
score: 114.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 433..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..87
NoneNo IPR availablePANTHERPTHR48032RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6coord: 83..191
NoneNo IPR availablePANTHERPTHR48032:SF12NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 107..413
NoneNo IPR availablePANTHERPTHR48032:SF12NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 83..191
NoneNo IPR availablePANTHERPTHR48032RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6coord: 107..413
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 76..189
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 221..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:252258..254181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi786.t1Gvermi786.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 252258..254181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi786.t1 ID=Gvermi786.t1|Name=Gvermi786.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=477bp
MATLHPPQVDGTPSRDQEPSEKWSAHDAPTNPPVNPDDFPDKSNDTEPSK
QPPEQPKSSNPQTPDPPNVPSALYEQQQRAFQQQQQYSQPPPEPPTQPSP
PSTSAGCKIFVGGLSWETDEQSLRAYFEQIGTVLDCVIMRDRHTGHPRGF
GFVTFADEEAATAAASRRHDLDGRQVEAKRAVPRSEGSSTSAPGHSASFT
AAPRGQRFSEGASQGAPHRAHHTTKCKVFVGGLPSGCGGDEFRNYFSRFG
EVVDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCV
EVKRAEPKGASQDRRHNRDSYNQGGGRAGGGASQNDALPHSGANGSGANA
AAAAAAAYYSNYPASLAEQYGAYYNNPQWQQYYAAMGYNFNFPQSYNPYQ
QYLQAYMSTQASANGVGGSAGMPANAASPNAPGAGGYDNAHGSGRYGGGH
GGGHGGGGGPSLRRSSRRDDRYHPYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf