Gvermi774.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi774.t1
Unique NameGvermi774.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length261
Homology
BLAST of Gvermi774.t1 vs. uniprot
Match: A0A2V3IDE1_9FLOR (50S ribosomal protein L15 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDE1_9FLOR)

HSP 1 Score: 419 bits (1078), Expect = 8.650e-147
Identity = 201/232 (86.64%), Postives = 218/232 (93.97%), Query Frame = 0
Query:    1 MQPSFIAPLGGAPKHATYIGLRPATCRLPSRAPVVARPALHVTPSAKIFDWKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALMKIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVVGGTELTVRNLTVKAHAFTTSAVEAIEGAGGTCVLISPTTGKDIVME 232
            MQP+F+APLG APKH TYIGLRP+TCRLP+R P  ARPA  V+P+AKIFDWKKRQDPD+ KLPEED+G FKFTNL+PAPGSRHRK RKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRR+PKFVGRP GPGHKKT YAL+KIEHLNGCEEGEIVTFEG+KEKGI+TKQK KI+KVVGG ELTV+NLTVKAHAFTTSAVEAIEGAGGTCVLISPTTGKDIV++
Sbjct:    1 MQPTFVAPLGRAPKHPTYIGLRPSTCRLPTRPPATARPASRVSPTAKIFDWKKRQDPDYNKLPEEDDGIFKFTNLRPAPGSRHRKKRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRIPKFVGRPTGPGHKKTEYALLKIEHLNGCEEGEIVTFEGMKEKGIVTKQKRKIYKVVGGAELTVQNLTVKAHAFTTSAVEAIEGAGGTCVLISPTTGKDIVLD 232          
BLAST of Gvermi774.t1 vs. uniprot
Match: R7QRC1_CHOCR (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRC1_CHOCR)

HSP 1 Score: 352 bits (902), Expect = 4.350e-120
Identity = 178/237 (75.11%), Postives = 196/237 (82.70%), Query Frame = 0
Query:    1 MQPSFIAPLGGAP--KHATYIGLRPATCRLPSRAPVVARPALHVTPSAKIFDWKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALMKIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVVGGTELTVRNLTVKAHAFTTSAVEAIEGAGGTCVLISPTTGKDIVMEEDE 235
            MQP+F AP  GAP  KH +Y+GLRP  C L +R       +  VTP+AK+FDWKKRQD  +  LP EDEG F  TNL+PAPGSR RK RKGRG +AGQG  CGFGMRGQKSRSGR VRPGFEGGQTPLYRR+PKFVGRPMGPGHKKT YALMKIE LNGCEEG +VTFEGLK  GIMTKQK KI+KVVGG +LTV+NLTVKAHAFTTSAV+AIEGAGGTCVL+SPTTGKDIV EE+E
Sbjct:    1 MQPAF-APSLGAPRAKHVSYVGLRPRACPLRARPSTAV--SARVTPTAKLFDWKKRQDATYADLPPEDEGIFTLTNLRPAPGSRKRKKRKGRGHSAGQGGSCGFGMRGQKSRSGRGVRPGFEGGQTPLYRRIPKFVGRPMGPGHKKTEYALMKIEFLNGCEEGSVVTFEGLKAMGIMTKQKRKIYKVVGGEDLTVKNLTVKAHAFTTSAVDAIEGAGGTCVLVSPTTGKDIVFEEEE 234          
BLAST of Gvermi774.t1 vs. uniprot
Match: A0A5J4Z048_PORPP (50S ribosomal protein L15 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z048_PORPP)

HSP 1 Score: 259 bits (661), Expect = 7.770e-84
Identity = 132/192 (68.75%), Postives = 149/192 (77.60%), Query Frame = 0
Query:   42 VTPSAKIFDWKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALMKIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVVGGTELTVRNLTVKAHAFTTSAVEAIEGAGGTCVLISPTTGKDIVMEE 233
            V PS K+FDWKKR    +    E   G    T + PAPGSR RK+RKGRG AAGQG  CGFGMRGQKSRSG   RPGFEGGQTPLYRRLPK+VGRPMGPGH KT Y L+K++ LN C EGE+VTF+ L E G MTK K K+ K++GG ELTV+NLTVKAHAFT+SAVEAIE AGG CVL+SPTTG+DI MEE
Sbjct:   35 VAPSMKVFDWKKRGAEAYSGRAEM--GEMSVTTVIPAPGSRKRKTRKGRGVAAGQGRSCGFGMRGQKSRSGNPTRPGFEGGQTPLYRRLPKYVGRPMGPGHTKTMYNLVKLDILNKCAEGEVVTFDALVESGKMTKGKFKLAKIMGGAELTVKNLTVKAHAFTSSAVEAIEAAGGKCVLLSPTTGEDINMEE 224          
BLAST of Gvermi774.t1 vs. uniprot
Match: A0A7S0G633_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G633_9RHOD)

HSP 1 Score: 251 bits (641), Expect = 1.570e-80
Identity = 129/190 (67.89%), Postives = 147/190 (77.37%), Query Frame = 0
Query:   47 KIFDWKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALMKIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVVGGT-ELTVRNLTVKAHAFTTSAVEAIEGAGGTCVLISPTTGKDIVMEEDE 235
            KIFDWKKR     G+  E + G   FT LKPAPGS  RK RKGRG +AGQG  CGFGMRGQKSRSGR  RPGFEGGQ PLYRR+PK+VGRPMGPGH  T+Y L+KIE LN  EEG +VT E L+  GI+TK KLK+ KVVGG  ELTV+NLTVKAHAFTTSAV AIE AGG C L++PTT +D+ M++DE
Sbjct:   50 KIFDWKKR-----GQSGEMEIGEMSFTTLKPAPGSNQRKKRKGRGHSAGQGGSCGFGMRGQKSRSGRPSRPGFEGGQNPLYRRVPKYVGRPMGPGHSYTKYGLLKIEDLNKAEEGTVVTQESLQAAGIVTKNKLKLTKVVGGNVELTVKNLTVKAHAFTTSAVAAIEAAGGKCQLLNPTTNEDLDMDDDE 234          
BLAST of Gvermi774.t1 vs. uniprot
Match: A0A7S1BKP2_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKP2_9STRA)

HSP 1 Score: 227 bits (578), Expect = 3.060e-71
Identity = 117/181 (64.64%), Postives = 133/181 (73.48%), Query Frame = 0
Query:   47 KIFDWKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALMKIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVVGGT-ELTVRNLTVKAHAFTTSAVEAIEGAGGTCVLISPTTG 226
            K+FDWK+R+  D   + + +   F   NLKPAPGSRHRK RKGRG AAGQGA CGFGMRGQKSRSGR  R GFEGGQ PLYRRLPKFVG+PMGPGH KT Y L+K++ LNG  EG  V F  L E G +TK K+ I KVV G  E T + L V+AHAFT+SA  AIEGAGG C L+SPTTG
Sbjct:   40 KVFDWKRREA-DESAINDAENFVFTLDNLKPAPGSRHRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKLDELNGAAEGSTVNFASLFESGDITKSKVGIHKVVTGKKEFTAKGLIVQAHAFTSSAQTAIEGAGGKCELLSPTTG 219          
BLAST of Gvermi774.t1 vs. uniprot
Match: A0A1X6NTT1_PORUM (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTT1_PORUM)

HSP 1 Score: 226 bits (575), Expect = 1.500e-70
Identity = 118/182 (64.84%), Postives = 136/182 (74.73%), Query Frame = 0
Query:   43 TPSAKIFDWKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALMKIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVVGGTELTVRNLTVKAHAFTTSAVEAIEGAGGTCVLISPT 224
            TP+AK+FDWKKR D ++  + E D  T   +NL+PAPGS HRK RKGRGDAAGQGA CGFGMRGQKSRSGR  R GFEGGQTPLYRRLPK+VGRPMGPGH K  YAL+K+  LN  E+ +    E L+E G +TK   K  KVVGG +LT + LTVKAHAFT SA EAIEG GG CV++  T
Sbjct:   56 TPTAKLFDWKKRADENYAVV-EGDIWTL--SNLRPAPGSAHRKKRKGRGDAAGQGASCGFGMRGQKSRSGRPTRAGFEGGQTPLYRRLPKYVGRPMGPGHTKKEYALIKLSTLNCVEDNKEADAEKLREAGALTKSCHKYSKVVGGEDLTAKGLTVKAHAFTKSAREAIEGNGGNCVVLPKT 234          
BLAST of Gvermi774.t1 vs. uniprot
Match: A0A7S1BF06_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BF06_9STRA)

HSP 1 Score: 224 bits (571), Expect = 3.510e-70
Identity = 116/184 (63.04%), Postives = 134/184 (72.83%), Query Frame = 0
Query:   44 PSAKIFDWKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALMKIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVVGGT-ELTVRNLTVKAHAFTTSAVEAIEGAGGTCVLISPTTG 226
            P+ K+FDWK+R+  D   + + +   F   NLKPAPGSRHRK RKGRG AAGQGA CGFGMRGQKSRSGR  R GFEGGQ PLYRRLPKFVG+PMGPGH KT Y L+K + +NG  EG  V+F  L E G +TK K  I KVV G  E + + +TV+AHAFT SA  AIEGAGG C L+SPTTG
Sbjct:   37 PTMKVFDWKRREA-DESAINDAETFVFTLDNLKPAPGSRHRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKTDEINGAAEGSTVSFGSLFEAGDVTKAKYGIHKVVTGKKEFSAKGVTVQAHAFTNSARAAIEGAGGKCELLSPTTG 219          
BLAST of Gvermi774.t1 vs. uniprot
Match: A0A836CHQ3_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ3_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.420e-69
Identity = 117/187 (62.57%), Postives = 134/187 (71.66%), Query Frame = 0
Query:   45 SAKIFDWKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALMKIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVVGGTELTVRNLTVKAHAFTTSAVEAIEGAGGTCVLISPTTGKDIVM 231
            S KIFDWK+R D       +E         L P+PGSRHRK+RKGRG +AGQGA CGFGMRGQ+SRSG  VR GFEGGQ PLYRRLPKFVGRPMGPGH K  + L+ +E LN   EG  V+FE L E+G +TK  LK  KVVG  EL V+NLTV+AHAFT SA EAIEGAGG C L+SPTT + + M
Sbjct:   43 SMKIFDWKRRDDDSANTAVKE----LSPATLVPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGSTVSFETLHEQGTLTKTSLKWHKVVGNGELNVKNLTVQAHAFTGSAKEAIEGAGGKCQLLSPTTNEIVDM 225          
BLAST of Gvermi774.t1 vs. uniprot
Match: A0A7S2W8A4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8A4_9STRA)

HSP 1 Score: 221 bits (562), Expect = 8.900e-69
Identity = 111/183 (60.66%), Postives = 134/183 (73.22%), Query Frame = 0
Query:   43 TPSAKIFDWKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALMKIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVVGGTELTVRNLTVKAHAFTTSAVEAIEGAGGTCVLISPTT 225
            T + K+FDWK+R+  D       D   F   NL+PAPGS+  K+RKGRG AAGQGA CGFGMRGQKSRSGR  RPGFEGGQTPLYRRLPK+VG+P+GPGHK+T+Y  +K+E LN   EG  V FE L+E   + K +  + KVVGG ELT ++LTV+AHAFT +A EAIE  GG CV +SPTT
Sbjct:   43 TLTMKVFDWKRREA-DESAFANVDSVVFTMDNLRPAPGSKKSKTRKGRGIAAGQGATCGFGMRGQKSRSGRPTRPGFEGGQTPLYRRLPKYVGKPLGPGHKRTQYNPIKLELLNSLPEGSTVNFEALREAKALPKCRFDLHKVVGGGELTTKSLTVQAHAFTGTAREAIESNGGKCVTLSPTT 224          
BLAST of Gvermi774.t1 vs. uniprot
Match: K0SHX0_THAOC (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SHX0_THAOC)

HSP 1 Score: 220 bits (561), Expect = 9.750e-69
Identity = 125/214 (58.41%), Postives = 146/214 (68.22%), Query Frame = 0
Query:   16 ATYIGLRPATCR-LPSRAPVVARPALHVTPSAKIFDWKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARCGFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALMKIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVV-GGTELTVRNLTVKAHAFTTSAVEAIEGAGGTCVLISPTTGK 227
            AT  G    T R LPS A   + P+     S K++DWK+R   +      E E T    ++KPAPGSR RK RKGRG +AGQGA CGFGMRGQK+RSGR  RPGFEGGQ PLYRRLPKF GRP GPGH+KT Y L+K++ +NGCEEG  V+FE L E G  TK KL I KVV G  E T + +TV+AHAFT SA EAIEGAGG  VL+S TT +
Sbjct:   11 ATASGFSSFTPRNLPSHAVTSSSPSQL---SMKLYDWKRRTADESAVNDLETEWTL--GSIKPAPGSRKRKQRKGRGISAGQGATCGFGMRGQKARSGRPTRPGFEGGQQPLYRRLPKFTGRPTGPGHQKTEYNLIKLDDINGCEEGSTVSFESLIETGATTKAKLDIHKVVVGREEFTAKGVTVQAHAFTKSAQEAIEGAGGKAVLLSKTTNE 219          
The following BLAST results are available for this feature:
BLAST of Gvermi774.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IDE1_9FLOR8.650e-14786.6450S ribosomal protein L15 n=1 Tax=Gracilariopsis c... [more]
R7QRC1_CHOCR4.350e-12075.11Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A5J4Z048_PORPP7.770e-8468.7550S ribosomal protein L15 n=1 Tax=Porphyridium pur... [more]
A0A7S0G633_9RHOD1.570e-8067.89Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S1BKP2_9STRA3.060e-7164.64Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A1X6NTT1_PORUM1.500e-7064.84Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A7S1BF06_9STRA3.510e-7063.04Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A836CHQ3_9STRA1.420e-6962.57Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A7S2W8A4_9STRA8.900e-6960.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K0SHX0_THAOC9.750e-6958.41Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005749Ribosomal protein L15, bacterial-typeTIGRFAMTIGR01071TIGR01071coord: 71..217
e-value: 9.1E-36
score: 120.8
IPR005749Ribosomal protein L15, bacterial-typePANTHERPTHR1293450S RIBOSOMAL PROTEIN L15coord: 64..218
NoneNo IPR availableGENE3D3.100.10.10coord: 142..222
e-value: 2.2E-15
score: 58.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..260
NoneNo IPR availablePANTHERPTHR12934:SF1139S RIBOSOMAL PROTEIN L15, MITOCHONDRIALcoord: 64..218
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 96..219
e-value: 5.2E-28
score: 98.1
IPR001196Ribosomal protein L15, conserved sitePROSITEPS00475RIBOSOMAL_L15coord: 184..215
IPR030878Ribosomal protein L15HAMAPMF_01341Ribosomal_L15coord: 72..221
score: 16.834597
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 74..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:172812..173594 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi774.t1Gvermi774.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 172812..173594 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi774.t1 ID=Gvermi774.t1|Name=Gvermi774.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=261bp
MQPSFIAPLGGAPKHATYIGLRPATCRLPSRAPVVARPALHVTPSAKIFD
WKKRQDPDHGKLPEEDEGTFKFTNLKPAPGSRHRKSRKGRGDAAGQGARC
GFGMRGQKSRSGRSVRPGFEGGQTPLYRRLPKFVGRPMGPGHKKTRYALM
KIEHLNGCEEGEIVTFEGLKEKGIMTKQKLKIWKVVGGTELTVRNLTVKA
HAFTTSAVEAIEGAGGTCVLISPTTGKDIVMEEDEVDNAVDGSASEVGES
SEDSETGKEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005749Ribosomal_L15_bac-type
IPR021131Ribosomal_L18e/L15P
IPR001196Ribosomal_L15_CS
IPR030878Ribosomal_L15
IPR036227L18e/L15P_sf