Gvermi772.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi772.t1
Unique NameGvermi772.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length241
Homology
BLAST of Gvermi772.t1 vs. uniprot
Match: A0A2V3IT05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 140 bits (353), Expect = 7.960e-36
Identity = 86/160 (53.75%), Postives = 103/160 (64.38%), Query Frame = 0
Query:    1 MVLVHLKSQFVSLFVTVLSGVAELLLFGALLGFNKYAECQALRRGKPVSVRLHRARTKFLAIFAMVVFIVLEVIMSFFSDPDFSSIPDPRPCVSIRRFDLFDTQVVGFLSDS-----VLINCIRTSETKSFQHVGNRSKADNT---VTCADSPLYEFSDE 152
            MV + LKSQFVSL VT++SG+AEL LFGALLGFNKY+EC ALR+G+ VSVRLHR R KFLA+ AMVVFI LEVIMSFFSDP          C+++ R DL +    GF  D+     +LI CI   +    Q  GN S   NT   V C    LYE+ +E
Sbjct:    1 MVEIPLKSQFVSLIVTLISGLAELFLFGALLGFNKYSECIALRKGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDLRE----GFTGDTNDEDFILIRCIGIKKDGFLQRAGNFSLNPNTKARVRCGKHALYEYPNE 156          
BLAST of Gvermi772.t1 vs. uniprot
Match: A0A2V3ISI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 114 bits (285), Expect = 2.710e-26
Identity = 79/233 (33.91%), Postives = 124/233 (53.22%), Query Frame = 0
Query:    1 MVLVHLKSQFVSLFVTVLSGVAELLLFGALLGFNKYAECQALRRGKPVSVRLHRARTKFLAIFAMVVFIVLEVIMSFFSDPDFSSIPDPRPCVSIRRFDLFDTQVVGFLSDSVL-INCIRTSETKSFQHVGNRSKADNTVTCADSPLYEFSDESFVMQPLDLKYSKACDLLTSFETGREELVCVFGVAQGRDFRFSELILEALIEDRIAKKTEVQFLQTTTSFNISKGQEQSL 232
            MVL+ LKSQ+ SL  T+LSG+AEL L  A+LG+NKY EC+AL  G  V+VR HR RT+ L + A + F+ LEV  SFFSDP        + C+S+    +    +   L  +V+ INC+ T+ +  +Q  GN S  D  + C D  L+         +P+  +++  C L        E  +C F  + G +  F+E++L+  +   +     ++  +TT  +N + G E+ L
Sbjct:    1 MVLIPLKSQYTSLIATILSGLAELALLSAVLGYNKYLECRALENGGRVNVRHHRFRTRALTVAATLAFVFLEVSNSFFSDPALKRGEVTKSCISLDALPIRRGMLDISLRAAVVGINCLGTNTSLLWQLAGNISD-DGEIKCGDDFLFSADIHHSPNEPVPDEHTMECIL------DGELNLCAFLYSNGSEVTFTEIVLDTDLSFVLDNNYALRVWKTTVYYNTT-GMEREL 225          
BLAST of Gvermi772.t1 vs. uniprot
Match: A0A2V3J5C2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 108 bits (270), Expect = 4.250e-24
Identity = 78/233 (33.48%), Postives = 120/233 (51.50%), Query Frame = 0
Query:    1 MVLVHLKSQFVSLFVTVLSGVAELLLFGALLGFNKYAECQALRRGKPVSVRLHRARTKFLAIFAMVVFIVLEVIMSFFSDPDFSSIPDPRPCVSIRRFDLFDTQVVGFLSDS-----VLINCIRTSETKSFQHVGNRSKADNTVT---CADSPLYEFSDESFVMQPLDLKYSKACDLLTSFETGREELVCVFGVAQGRDFRFSELILEALIEDRIAKKTEVQFLQTTTSFNIS 225
            MVL+ LKSQ+ SL VTV+SG+AEL L  A+L FNKY EC+AL+ G  V+VR HR RTK L + A + F+ LEV  SF+SDPD  +    + C S+       T   G L+ S     V + CI  + T  +QH GN S   N        D  ++E  ++  V+   +++ +    +   +  G     CVF    G +  F++ +    +   + +   +   +TT S+N++
Sbjct:    1 MVLIPLKSQYTSLIVTVISGIAELALLSAVLVFNKYLECRALQNGGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLDAL----TVQQGLLNISTQTTVVGVKCIGINSTLFWQHAGNISDGRNIGNGGNIGDDEVFE-CEKKEVLYTANVERAPDEPVPDEYVVGCVGTSCVFVYRSGNEVTFTDFVHSEDVSRVLNESITLPVWKTTISYNVT 228          
BLAST of Gvermi772.t1 vs. uniprot
Match: A0A2V3J5A0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 97.4 bits (241), Expect = 4.770e-20
Identity = 58/160 (36.25%), Postives = 87/160 (54.37%), Query Frame = 0
Query:    1 MVLVHLKSQFVSLFVTVLSGVAELLLFGALLGFNKYAECQALRRGKPVSVRLHRARTKFLAIFAMVVFIVLEVIMSFFSDPDFSSIPDPRPCVSIRRFDLFDTQVVGFLSD-SVLINCIRTSETKSFQHVGNRSKADNTVTCADSPLYEFSDESFVMQPL 159
            MVL+ LKSQ+VSL  T++S + EL L  ALL  N Y EC AL++G  VSV  H+ R   L +     F  +E+++SF+SDP        +PCV++             L +  ++++C++T+E+  F  VGN S     V CA+S    F+ E  V  P+
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKVECAESATLMFTLEPHVSLPI 160          
BLAST of Gvermi772.t1 vs. uniprot
Match: A0A2V3IMC1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC1_9FLOR)

HSP 1 Score: 88.6 bits (218), Expect = 6.600e-17
Identity = 72/228 (31.58%), Postives = 110/228 (48.25%), Query Frame = 0
Query:    1 MVLVHLKSQFVSLFVTVLSGVAELLLFGALLGFNKYAECQALRRGKPVSVRLHRARTKFLAIFAMVVFIVLEVIMSFFSDPDFSSIPDPRPCVSIRR-FDLFDTQVVGFLSDSVLINCIRTSETKSFQHVGNRSKADNTVTCADSPLYEFSDESFVMQPLDLKYSKACDLLTSFETGREELVCVFGVAQGRDFRFSELILEALIEDRI--AKKTEVQFLQTTTSFNIS 225
            MV + LK+Q+VSL +T++S + E++   AL   N   ECQ L++ K + VR +R R K +A+ + ++F+ LE+I+SFFSDP    +    PCVS+     L   Q     +D +   C       ++  VGN S +D  V C+    Y F D     +   L  S A       E   +   CVF   Q     FS  +L  ++ +    A  TE+ FL+T   F+ S
Sbjct:    1 MVTIALKAQYVSLIITIISFICEVIFIAALQTVNSIRECQLLKQKKQLRVRNYRHRAKIIALISALLFLGLEIIVSFFSDPVQLELFQSEPCVSVDNVLRLQGPQGEFREADFIEGKCQTLRGNFNYVRVGNVSLSDGQVRCSKKAAY-FYDIVSASETKKLPVSTA-------EVSCKGETCVFVFEQQNSTYFSGALLPDIVAELRSGAVDTEMAFLKTELLFDSS 220          
BLAST of Gvermi772.t1 vs. uniprot
Match: A0A2V3ICZ9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICZ9_9FLOR)

HSP 1 Score: 57.8 bits (138), Expect = 3.610e-6
Identity = 44/153 (28.76%), Postives = 71/153 (46.41%), Query Frame = 0
Query:    1 MVLVHLKSQFVSLFVTVLSGVAELLLFGALLGFNKYAECQALRRGKPVSVRLHRARTKFLAIFAMVVFIVLEVIMSFFSDPDFSSIPDPRPCVSI-----RRFDLFDTQVVGFLSDSVLINCIRTSETKSFQHVGNRSKADNTVTCADSPLYE 148
            MV++ +KSQ VSLF+T+ + VAEL     +L F    E   L  GK +SVR H+          +  FI++E+I+    + +    P   PCV       + F   +     +L+ +   +C +  +      + N S     V+CAD P+YE
Sbjct:    1 MVVIGVKSQVVSLFITLATAVAELSFTTGVLLFISSREWSKLENGKSLSVRGHQRVVSQTLAACIAAFIIVEIIVGASIEDELRMTPFTEPCVQTGINTGQEFTSIEQPSRSYLAQT---SCSKFKDFWLQIFLTNFSVTSTVVSCADEPVYE 150          
The following BLAST results are available for this feature:
BLAST of Gvermi772.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IT05_9FLOR7.960e-3653.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISI7_9FLOR2.710e-2633.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C2_9FLOR4.250e-2433.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A0_9FLOR4.770e-2036.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMC1_9FLOR6.600e-1731.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICZ9_9FLOR3.610e-628.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..240
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..58
NoneNo IPR availableTMHMMTMhelixcoord: 59..78
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:57650..58440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi772.t1Gvermi772.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 57650..58440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi772.t1 ID=Gvermi772.t1|Name=Gvermi772.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=241bp
MVLVHLKSQFVSLFVTVLSGVAELLLFGALLGFNKYAECQALRRGKPVSV
RLHRARTKFLAIFAMVVFIVLEVIMSFFSDPDFSSIPDPRPCVSIRRFDL
FDTQVVGFLSDSVLINCIRTSETKSFQHVGNRSKADNTVTCADSPLYEFS
DESFVMQPLDLKYSKACDLLTSFETGREELVCVFGVAQGRDFRFSELILE
ALIEDRIAKKTEVQFLQTTTSFNISKGQEQSLHKFRKHQL*
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