Gvermi7705.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7705.t1
Unique NameGvermi7705.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length230
Homology
BLAST of Gvermi7705.t1 vs. uniprot
Match: A0A2V3ISI4_9FLOR (VWFA domain-containing protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI4_9FLOR)

HSP 1 Score: 238 bits (608), Expect = 3.320e-76
Identity = 124/231 (53.68%), Postives = 160/231 (69.26%), Query Frame = 0
Query:    1 MLGLISAFALFFSLGSCMSHEDAKLMYKNTVRAAVAEVERRGCSVNVCFAVDTSGSVSPVQFGLEKDFLIDITSIVGADRRSKFAAGQYGSQTYSISALTDDVEAFNLRVRNANFQNDPATSVGSGIVFCDRQLRREMRVNPFSNHANKMVVLGDGRNNLGGDPVRRANNFRNRAQGVVSTVGVGF---QDTTALAAIAGSADRVFAIDDYVELSFVIDDLVYDICGIVLD 228
            ML      AL F+  SC S E+AKL Y+NT+R A   VE RGC  +VCFA+DTSGSV+  QF   +DF++DIT+I+G DRR+KFAAGQYG +TY I+++T DV  FN  V  + +++D  TSVGSGIVFC  QLRR  +    +N  NKMVV+GDGRN LGGDP+RRANNFR +  G +STV +G+   +    L+ +AG    VF +DDY ELS  ++DLV +ICGI LD
Sbjct:    1 MLKFFFVLALLFAYASCRSVEEAKLRYQNTIRTASEAVEARGCLAHVCFALDTSGSVTKQQFFYGRDFILDITAILGNDRRTKFAAGQYGRRTYKIASMTGDVATFNTEVGFSPYRHDSQTSVGSGIVFCHSQLRRARKKAADANIVNKMVVIGDGRNTLGGDPIRRANNFRRKVGGEISTVSIGYPGKEGERILSEVAGENGGVFTVDDYDELSEKVEDLVAEICGISLD 231          
BLAST of Gvermi7705.t1 vs. uniprot
Match: A0A2V3IBU0_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBU0_9FLOR)

HSP 1 Score: 223 bits (569), Expect = 1.400e-69
Identity = 115/215 (53.49%), Postives = 150/215 (69.77%), Query Frame = 0
Query:   17 CMSHEDAKLMYKNTVRAAVAEVERRGCSVNVCFAVDTSGSVSPVQFGLEKDFLIDITSIVGADRRSKFAAGQYGSQTYSISALTDDVEAFNLRVRNANFQNDPATSVGSGIVFCDRQLRREMRVNPFSNHANKMVVLGDGRNNLGGDPVRRANNFRNRAQGVVSTVGVGF---QDTTALAAIAGSADRVFAIDDYVELSFVIDDLVYDICGIVLD 228
            C S E+AKL Y+NT+R A   VE RGC  +VCFA+DTSGSV+  QF   +DF++DIT+I+G DRR+KFAAGQYG +TY I+++T DV  FN  V  + +++D  TSVGSGIVFC  QLRR  +    +N  NKMVV+GDGRN    DP+RRANNFR +  G +STV +G+   +    L+ +AG    VF +DDY ELS  ++DLV +ICGI LD
Sbjct:   71 CRSVEEAKLRYQNTIRTASEAVEARGCLAHVCFALDTSGSVTKQQFSKGRDFILDITAILGNDRRTKFAAGQYGRRTYKIASMTGDVATFNTEVGFSPYRHDSQTSVGSGIVFCHSQLRRARKNAADANIVNKMVVIGDGRNTF--DPIRRANNFRRKVGGEISTVSIGYPGKEGERILSEVAGETGGVFTVDDYDELSEKVEDLVVEICGISLD 283          
BLAST of Gvermi7705.t1 vs. uniprot
Match: A0A2V3ID60_9FLOR (Cartilage matrix protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID60_9FLOR)

HSP 1 Score: 130 bits (327), Expect = 5.920e-34
Identity = 75/190 (39.47%), Postives = 114/190 (60.00%), Query Frame = 0
Query:   38 VERRGCSVNVCFAVDTSGSVSPVQFGLEKDFLIDITSIVGAD-RRSKFAAGQYGSQTYSISALTDDVEAFNLRVRNANFQNDPATSVGSGIVFCDRQLRREMRVNPFSNHANKMVVLGDGRNNLGGDPVRRANNFRN-RAQGVVSTVGVGFQDTTALAAIA-GSADRVFAIDDYVELSFVIDDLVYDICG 224
            VER GC++NVCFA+D S SV+P+ + ++KDF+  +++++  +   S F+A QYG Q   IS LT  ++ FNL+V  +N      +S+G GI +C  QL  E+  NP      K++V GDGR     D V  A +F++    G +STVGVGF +T  L  IA     R+F ID+Y++   ++ DL  ++CG
Sbjct:   39 VERNGCNLNVCFALDGSASVTPLDYEMQKDFVQLMSAVLDFEVENSSFSAVQYGDQVSPISPLTQSIDDFNLKVHASNISAFQGSSIGKGITYCSNQLL-ELADNPV-----KIIVFGDGRETSKTDAVSIAASFKDFHPNGRLSTVGVGFPNTVLLKTIAEAGGGRLFEIDEYIDALDLVVDLFLEVCG 222          
BLAST of Gvermi7705.t1 vs. uniprot
Match: R7Q3A9_CHOCR (VWFA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3A9_CHOCR)

HSP 1 Score: 99.4 bits (246), Expect = 9.590e-22
Identity = 65/189 (34.39%), Postives = 106/189 (56.08%), Query Frame = 0
Query:   37 EVER-RGCSVNVCFAVDTSGSVSPVQFGLEKDFLIDITSIVGADRRSKFAAGQYGSQTYSISALTDDVEAFNLRVRNANFQNDPATSVGSGIVFCDRQLRREMRVNPFSNHANKMVVLGDGRNNLGGDPVRRANNFRNRAQGVVSTVGVGF-QDTTALAAIAGSADRVFAIDDYVELSFVIDDLVYDIC 223
            EV R R C++ +CFA+D SGS+SPVQF +++D L+ + + V  +  + F+A QYG    +IS  T +   F   V ++ FQ  P T +GSG+ FC   L+ E R         ++++LGDGR+N     +    +  N  Q  +S VG+GF +++  L  I GS  R+ A++ Y ++  ++  LV  +C
Sbjct:   58 EVNRGRRCNMRLCFALDGSGSISPVQFKVQQD-LVKLLASVAREGGATFSAVQYGLSNTAISTPTGNAPKFRRAVDDSIFQRAPRTFIGSGLGFCISNLKTEPR-----GRGRRILLLGDGRSNFFTLALPLVLSTLNDIQ--ISAVGIGFPRNSRTLLDITGSRSRLCAVNRYSDIRRIVFKLVRGLC 238          
BLAST of Gvermi7705.t1 vs. uniprot
Match: A0A5J5CNS9_9PERO (Uncharacterized protein (Fragment) n=2 Tax=Etheostoma spectabile TaxID=54343 RepID=A0A5J5CNS9_9PERO)

HSP 1 Score: 59.3 bits (142), Expect = 1.470e-6
Identity = 55/200 (27.50%), Postives = 89/200 (44.50%), Query Frame = 0
Query:   31 VRAAVAEVERRGC---SVNVCFAVDTSGSVSPVQFGLEKDFLIDITSIVGADRR-SKFAAGQYGSQTYSISALT--DDVEAFNLRVRNANFQNDPATSVGSGIVFCDRQLRREMRVNPFSNHANKMVVLGDGRNNLGGDPVRRANNFRNRAQGVVSTVGVGFQDTTALAAIAGSADRVFAIDDYVELSFVIDDLVYDICG 224
            ++A V  V+ +GC   +V++ FA+D SG VSP  F   ++F+  +T     +R  ++ A   YG +  ++  L   +   A    V +AN+    A++  + +      L       P  N A  MV  G G    G D V  A   R+    V   +G+G      L  IAGS + + A+  Y +L +  D LV  +C 
Sbjct: 1661 LKAKVCSVDTQGCLGQAVDLVFALDASGGVSPNNFATIRNFVRSLTVQFDINRDVAQVALVAYGRRATTVFNLDTHESGSAILKAVDDANYLGGVASAGAALLHIHSNVLTVAKGARPGVNKAVVMVTDGSG----GDDAVVPAQKIRDNGVSVF-VIGIGDIQKERLLQIAGSEEHMIAVSSYEDLKYFEDVLVQMLCS 1855          
BLAST of Gvermi7705.t1 vs. uniprot
Match: A0A2V3IQ26_9FLOR (Matrilin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ26_9FLOR)

HSP 1 Score: 57.8 bits (138), Expect = 3.210e-6
Identity = 52/194 (26.80%), Postives = 85/194 (43.81%), Query Frame = 0
Query:   40 RRGCS-VNVCFAVDTSGSVSPVQFGLEKDFLIDITSIVGADRRSKFAAGQ------YGSQTYSISALTDDVEAFNLRVRNANFQNDPATSVGSGIVFCDRQLRREMRVNPFSNHANKMVVLGDGRNNLGGDPVRRANNFRNRAQGVVSTVGVGFQ-DTTALAAIAGSADRVFAIDDYVELSFVIDDLVYDICGI 225
            +R C  +NVCFA+D SGS+SP  F  + + ++ I     A   S FA G       + S    I + T D+    ++    N Q    TS G+ +  C  Q+         +     +V+L DG +N        A   +N    ++ T+G+G   +  +L +IA S D    +DD+      I+ +V  IC +
Sbjct:   71 QRSCPPLNVCFAIDESGSISPTDFIEQTEAIVAI-----AQELSTFAPGSTLSAVGFSSFAELIQSPTTDINGEFVQAIQGNSQLGGTTSSGAALQLCQTQIAS-------AADPRIIVLLTDGADNTMPFGTSVAGGIKNNGI-IIITIGIGSGINAPSLRSIASSPDLFIFVDDFSSFEDSIEVIVDTICPV 251          
BLAST of Gvermi7705.t1 vs. uniprot
Match: G3NTQ8_GASAC (von Willebrand factor A domain containing 2 n=3 Tax=Gasterosteidae TaxID=69291 RepID=G3NTQ8_GASAC)

HSP 1 Score: 57.8 bits (138), Expect = 4.160e-6
Identity = 53/200 (26.50%), Postives = 89/200 (44.50%), Query Frame = 0
Query:   31 VRAAVAEVERRGC---SVNVCFAVDTSGSVSPVQFGLEKDFLIDITSIVGADRR-SKFAAGQYGSQTYSISAL-TDDVEAFNLRVRNANFQNDPATSVGSGIVFCDRQLRREMR-VNPFSNHANKMVVLGDGRNNLGGDPVRRANNFRNRAQGVVSTVGVGFQDTTALAAIAGSADRVFAIDDYVELSFVIDDLVYDICG 224
            ++A +  V+ +GC   +V++ FA+D SG VSP  FG+ +DF+  +T     +R  ++ A   Y  +  ++  L   +  +  L+  +A        S GS ++     +    R   P  N A  +V  G G    G D V  A   R+    +   +G+G      L  I GS D + A+  Y +L +  D LV  +C 
Sbjct:  493 LKAKICSVDTQGCLGQAVDLVFALDASGGVSPANFGVLRDFVRSLTVQFDINRDVAQVALVAYSRRATTVFNLDAHETGSAVLKAVDAADYMGGVASTGSALLHVRSDVLTAARGARPGVNKAVVVVTDGSG----GDDAVVPAQKLRDNGVSLF-VIGIGDVQKERLLRITGSEDHMIAVPFYEDLKYFEDVLVQMLCS 687          
BLAST of Gvermi7705.t1 vs. uniprot
Match: A0A484C2X1_PERFV (Uncharacterized protein n=12 Tax=Perciformes TaxID=8111 RepID=A0A484C2X1_PERFV)

HSP 1 Score: 57.4 bits (137), Expect = 5.660e-6
Identity = 53/200 (26.50%), Postives = 89/200 (44.50%), Query Frame = 0
Query:   31 VRAAVAEVERRGC---SVNVCFAVDTSGSVSPVQFGLEKDFLIDITSIVGADRR-SKFAAGQYGSQTYSISALT--DDVEAFNLRVRNANFQNDPATSVGSGIVFCDRQLRREMRVNPFSNHANKMVVLGDGRNNLGGDPVRRANNFRNRAQGVVSTVGVGFQDTTALAAIAGSADRVFAIDDYVELSFVIDDLVYDICG 224
            ++A +  V+ +GC   +V++ FA+D SG VSP  F   +DF+  +T     +R  ++ A   YG +  ++  L   +   A    V +A++    A++  + +      L       P  N A  +V  G G    G D V  A   R+    V   +G+G      L  IAGS + + A+  Y +L +  D LV  +C 
Sbjct:  515 LKAKICSVDTQGCLGQAVDLVFALDASGGVSPNNFATTRDFVRILTVQFDINRDVAQVALVAYGRRATTVFNLDAHESGSAILKAVDDASYLGGVASTGAALLHIHSNVLTVAKGARPGVNKAVVLVTDGSG----GDDAVVPAQKIRDNGVSVF-VIGIGDIQRERLLQIAGSEEHMIAVSSYEDLKYFEDVLVQMLCS 709          
The following BLAST results are available for this feature:
BLAST of Gvermi7705.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3ISI4_9FLOR3.320e-7653.68VWFA domain-containing protein n=3 Tax=Gracilariop... [more]
A0A2V3IBU0_9FLOR1.400e-6953.49VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3ID60_9FLOR5.920e-3439.47Cartilage matrix protein n=1 Tax=Gracilariopsis ch... [more]
R7Q3A9_CHOCR9.590e-2234.39VWFA domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A5J5CNS9_9PERO1.470e-627.50Uncharacterized protein (Fragment) n=2 Tax=Etheost... [more]
A0A2V3IQ26_9FLOR3.210e-626.80Matrilin-2 n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
G3NTQ8_GASAC4.160e-626.50von Willebrand factor A domain containing 2 n=3 Ta... [more]
A0A484C2X1_PERFV5.660e-626.50Uncharacterized protein n=12 Tax=Perciformes TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 44..223
e-value: 7.3E-14
score: 62.1
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 46..213
e-value: 4.5E-18
score: 66.1
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 46..218
score: 15.412742
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 40..221
e-value: 2.2E-23
score: 85.0
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 31..225
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..229
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableCDDcd01450vWFA_subfamily_ECMcoord: 45..205
e-value: 1.11321E-14
score: 67.3166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:2815365..2816054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7705.t1Gvermi7705.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 2815365..2816054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7705.t1 ID=Gvermi7705.t1|Name=Gvermi7705.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=230bp
MLGLISAFALFFSLGSCMSHEDAKLMYKNTVRAAVAEVERRGCSVNVCFA
VDTSGSVSPVQFGLEKDFLIDITSIVGADRRSKFAAGQYGSQTYSISALT
DDVEAFNLRVRNANFQNDPATSVGSGIVFCDRQLRREMRVNPFSNHANKM
VVLGDGRNNLGGDPVRRANNFRNRAQGVVSTVGVGFQDTTALAAIAGSAD
RVFAIDDYVELSFVIDDLVYDICGIVLDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf