Gvermi7680.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7680.t1
Unique NameGvermi7680.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length316
Homology
BLAST of Gvermi7680.t1 vs. uniprot
Match: A0A2V3IV40_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV40_9FLOR)

HSP 1 Score: 216 bits (551), Expect = 3.610e-66
Identity = 115/237 (48.52%), Postives = 164/237 (69.20%), Query Frame = 0
Query:   68 ISSIYLLLVLFFGIAECRLTHERGATETLLQYGSAESAQYFLLKLNENERLMNGSLKTLDTNILTSYDLKVEQIAESLFNITAFLVFDYFPGKVHYTIVFTTISAKGDKKSVYSLRRSHSVYGIAFYDNSLGRKKLISGDFGYGLSLVAPPFDDKFIRLKYISYAPKNADLDAIAYVISRGTHEAVLRDKDVRITDGRLKIKLQPRVTGSCLIIVEARNILVDGESFETVILVRVKD 304
            + S++ LL+L   + E  L H +G++ETLLQYGSAES Q+FL +LN+  +L+N +L+T + +I+TSY +KV+QI+++LFNITA L F+Y PG+  Y I   T S  G   S+Y++ R+HSVYG+AFYD+S G   LISGDFGYGLSL++    ++ +RLKYI+  P+    +  A V+      A+L D DV I    L IKL+P   GS LI +E+ N++VDGESFET ++VRV+D
Sbjct:    5 VLSLFTLLLL--SVVESSLIHTQGSSETLLQYGSAESTQFFLFELNDTAQLVNTTLETSNHSIITSYVIKVDQISDTLFNITATLFFEYLPGEAVYQIAARTESPGG--ASIYTMERNHSVYGMAFYDDSHGTMALISGDFGYGLSLISSSLGEEPVRLKYIANVPREVAFNLTANVLFNRVQGAMLEDDDVSIDGDGLYIKLRPHRIGSALITIESSNLVVDGESFETAVIVRVRD 237          
BLAST of Gvermi7680.t1 vs. uniprot
Match: A0A2V3IBJ0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBJ0_9FLOR)

HSP 1 Score: 152 bits (383), Expect = 1.220e-41
Identity = 86/198 (43.43%), Postives = 123/198 (62.12%), Query Frame = 0
Query:  107 YFLLKLNENERLMNGSLKTLDTNILTSYDLKVEQIAESLFNITAFLVFDYFPGKVHYTIVFTTISAKGDKKSVYSLRRSHSVYGIAFYDNSLGRKKLISGDFGYGLSLVAPPFDDKFIRLKYISYAPKNADLDAIAYVISRGTHEAVLRDKDVRITDGRLKIKLQPRVTGSCLIIVEARNILVDGESFETVILVRVKD 304
            +FL +LN+  +L+N +L+T + +I+TSY +KV+QI+++LFNITA L F+Y PG+  Y I   T S  G   S+Y++ R+HSVYG+AFYD+S G   LISGDFG   ++                  P+    +  A V+    H A+L D DV I    L IKL+P   GS LI +E+ N++VDGESFET ++VRV+D
Sbjct:    9 FFLFELNDTAQLVNTTLETSNHSIITSYVIKVDQISDTLFNITATLFFEYLPGEAVYQIAARTESPGG--ASIYTMERNHSVYGMAFYDDSHGTMALISGDFGTSQNV------------------PREVAFNPTANVLFNRVHGAMLEDDDVSIDGDGLYIKLRPHGIGSALITIESSNLVVDGESFETAVIVRVRD 186          
BLAST of Gvermi7680.t1 vs. uniprot
Match: A0A2V3ILQ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILQ4_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 2.210e-28
Identity = 76/244 (31.15%), Postives = 134/244 (54.92%), Query Frame = 0
Query:   66 MNISSIYLLLVLFF-GIAECRLTHERGATETLLQYGSAESAQYFLLKLNENERLMNGSLKTLDTNILTSYDLKVEQIAESLFNITAFLVFDYFPGKVHYTIVFTTISAKGDKKSVYSLRRSHSVYGIAFYDNSLGRKKLISGDFGYGLSLVAPPFDDKFIR-LKYISYAPKNADLDAIAYVISRGTHEA--VLRDKDVRITDGRLKIKLQPRVTGSCLIIVEARNILVDGESFETVILVRVKDS 305
            M + S++  LVL     A  +L  + G+ E+LLQYGSA+S + +LL ++  + +   SL T D  +LTS+++   Q+++ L+NI+  L FD  PG+V Y I   T ++ G +     L  SHSV+G+ FY+   G ++L+SGD   G+   +    +   R    IS+ P    L+  + + ++    A  +L + D+ ++   + + + P  TG+ ++ VE   + VDGES ETV+ + V ++
Sbjct:    1 MFVVSVFTFLVLVLHSFAVAQLALQSGSHESLLQYGSAQSVKTYLLNVSPEQTVTEVSLSTQDGKVLTSHEVSFSQVSQGLYNISVNLFFDGIPGEVQYRITAQTRASDGSEHRE-ELSASHSVFGVVFYEEVQGERRLVSGDDSDGIHYTSFTTPESPARTFSAISHTPAGVILEGKSSIRAQTGSGASPLLLESDIDVSGDGMSVDVHPYRTGAVIVTVEFPELQVDGESHETVVYISVPNT 243          
The following BLAST results are available for this feature:
BLAST of Gvermi7680.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IV40_9FLOR3.610e-6648.52Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IBJ0_9FLOR1.220e-4143.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILQ4_9FLOR2.210e-2831.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..315
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:2162923..2182650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7680.t1Gvermi7680.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 2162923..2182650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7680.t1 ID=Gvermi7680.t1|Name=Gvermi7680.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=316bp
MSDILQNPAVRLTLHGVRVVTLERDRLSAVALRIAITRKIRTYRRGREEG
EPKPRGGPEQPYGSTMNISSIYLLLVLFFGIAECRLTHERGATETLLQYG
SAESAQYFLLKLNENERLMNGSLKTLDTNILTSYDLKVEQIAESLFNITA
FLVFDYFPGKVHYTIVFTTISAKGDKKSVYSLRRSHSVYGIAFYDNSLGR
KKLISGDFGYGLSLVAPPFDDKFIRLKYISYAPKNADLDAIAYVISRGTH
EAVLRDKDVRITDGRLKIKLQPRVTGSCLIIVEARNILVDGESFETVILV
RVKDSTRRHRYVKQG*
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