Gvermi767.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi767.t1
Unique NameGvermi767.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1587
Homology
BLAST of Gvermi767.t1 vs. uniprot
Match: A0A2V3IT18_9FLOR (IPT/TIG domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT18_9FLOR)

HSP 1 Score: 1971 bits (5106), Expect = 0.000e+0
Identity = 996/1553 (64.13%), Postives = 1236/1553 (79.59%), Query Frame = 0
Query:   28 LSNNRPTFESFRQLESTPSVGISFESQSDTDFFLVNGESDELIVNFIFMPPSGSSPEEFAISFACESSIVLFNNSCSITNTISAIIGTDATAFNTTVACTFERFPAITSCSLSATSVARQPLRFQSEDVPVNVYGIVLYEPDENGQVSESAKILSGYGNSFELETYDREDQGIRELQSYGVLPDNIPYEGSNGISFLNLASVSVIADDQLFWYNISSCSITGSYYDASGPVFENPTQCGLGFAVRNEDVYPTFGAHLRPFKSGKFTLQLNWDSLGPNGEAYEQAVVFSVVERAPPVVVGISKQESYQSLPCGIETLNITGFNFRFSDKRQLLTSNSDGSVSVWPEVQESFSYNEREDLSFLSFESSGGVGKNVPFSVVVFYGSESVTAISLQNDI--ILATNFSTPPELIGLAPNIAEPDGGTKIVLNGTFDGFKNSSFLRVGGFSIRGIDVEIIDGASIAFLAPPLSALGRQYNYDVFVEVCAERSDSLSLTYNVPPAVSITAADSSTNDDGVFVIPFDGEATFVAEVSANNINVTYNWGLLSIDGDAVSLHNSTLTGQVFTVSSDVINPSGVLFVLQVNVTNSIELYDSSNITIVRANPVDEYILVNLFEIETLKRSVNATTLIQASLVVEANNISEVVLEWVYRGERYVVDESMGFRNASQKAQDITGPTKLGLEFNIARKDLQIGVSRIELIATLRNNKEISGRDSIDVVVIQSKLEAVINDGLNGTLILSGNDLHLNGGNSFDPDILPDESNPTIEIQYDWIGCQSSLDSSFLTDVSDCSSILPEILNSVNITIAAADLIDSRLDTETVPIPTFFLFGLRVSKDNRTSETYAYFELQTLESPEAVPVLTSLDVVDGKGIPIDLKKANLFSDIIIQPESDDISVFWSFDMANVGQQYLLLQPDVVKQGRGFVSTRGEKSRLPLAFAANSLEETTEYVVEVSVFSSRSSLVQTYEISFVTSETPKLLCTGPIEDSGTTSETVFTISGQLTFEAQEIEYCFSLISSRMEKFFVGKGCSSVPFATFSVHKDGVYQIECEAKTVSGTSVDKVTLNRTLSVKSPTPPEDQTVLENLAERIANLTEEVAFCEAVRDHGCLTALISAASEVAQTVVSVTDSDSSEEAQSLIDFTQSYVANLSRISEGLTKTTVYQPNQILAAIDLTFYLLLVPQSLFEDESTLFAALRQAETAIGITEDSTIEALVSDLLVEKVSTIANISLSVAFNIGHEGSSRRRLLQEPGLTRRAYGILLVKTTRFIASVRAQQETCGFSGTESTAVRESVIGRQIPTTSSNIQIQSVELHVQVSCNSNQVGGIIELTDIQRKLCSDMIPILSSRRVEVSIIAIPKESLAATGLLLDVDNRASRCPIIDVRGVDGDEIPPQCIQVTLKIETKSGDSLTEIRAGIIRNESSVPIDFCDIDDCFLFQTDDQDVVSVTESTVSVMTKNQGLFVAGIPHERIAGPIDDDIRGDGLAGVGSTGVAIGIGVAFVVGTILVMWFAATHFVVIAP-ATAIEDDWEYVERDAYGRGMEDEYKDPNPSFRAEHFLPKDANLPS 1577
            LS  R    + RQL S P VGIS  SQS+TDF+L+NGES+EL+ NFIFMPPS SSPEE+ +SF CES IVLFN+SCSITNTIS I+GT+ATA+NTTV CTFERFPA T C+L+ATSVARQ  +F SE +P NVYGIV Y PD++G VS+ A I+SGY N++EL +YDRE QG+R++ SYG+ P    Y GS+GISFL LA+VSV+ DD +F YN+S CSITG+ + +   V +N  +CGLG AV +E  +P  GA  RP+KSGKFTLQLNWD++G  GE YEQA+VFSVVERAPPV+  + KQ  YQSLPCG ETLN+TGFNFR SDKR+LL SN DG++SVW    +SF Y++  D S    ES GGVG+NVPF++   YGS+ V A+ LQ+D   + + +FSTPPEL+G+ PN++EP+GG++IVL GTFDGFK +S +R+GGF IRG DV+I   + +AF +PPLSALG+Q++Y+V VEVCAERS+   L YNV P ++ITAADSSTN++  +VIP+DGEATFVAEVS NN   +Y W LLS DG+ + L N+TLT Q+FTV++D+I+PSG  F+LQ  V NS+ L D+S +TI  A PV E+ILVN+FE+E L RS+N+TTL+QASLVVE +N + VVLEWVYR   YVVDE+  FRN+S   Q +TGPTKLGLEFNIAR+DL +GVSR+ELIATL +N  ISGRD++++VVI S+L+A+INDGLNGTL+LSG DL+L+GGNSFDPD+LPDESNPT EIQYDW  CQ SLD+SF  DV DCS ILPEILNSVNITI A++L DSRLD    P PTFF FGL VSKDNRT+ TY+YFEL+T  S E VP LT+L+VVD KGI ID+K AN  +DI+IQP SDD +V WSFDM  + QQYLLLQ  V+K G G+VS RG++SRLPLAFAANSLEE TEY V+VSV+S+ SS+VQ YEISF+TSE PKL CT PIE+ G  SET+FTISGQL+FEAQ IEYCF L SS  E+F VGKGCSSVPFA+F+ H++G+YQIECEA+T SG  VD+V LN TLS+  PTP EDQTVLENL++R+ANLTEE   CEA+RDHGCL +LIS A+ +A  VVSVTDSD+SEEAQ L+D TQSYVANLSRISE LT TTVY+PNQI  AIDL+FYLLLVPQSLFEDE+TLFAAL+QAE+AI ITEDST+EALVSD LVEKVSTIAN+SL+ AFNIG EG+SRRRL ++ G+ RRAYG+LL+KTT+ IAS+RAQQETCGFSG EST +RES + RQ+P   S+ +I  V+LHVQVSC+ NQV   + L+ +Q++LC  ++  +SSRR+  S + IP+ES+ ATGLLLD+D+R + CPI++VRG+  DEIPP+C +VT++I    G S  E RAGII N+SSVP+D C  D+CF+F+TDD D+V VT++ V++ TKNQG F+AGIP ER  GPI+D IRG  LA  G+ G+ +GIGVAFV+GT+LV WFAATH VV+AP A A+ +DWEYVERD +GRG++++  D N  +RAEH+LPK A LPS
Sbjct:   38 LSRLRTGLGTSRQLNSIPPVGISVVSQSETDFYLINGESEELVANFIFMPPSDSSPEEYVMSFGCESDIVLFNDSCSITNTISDIVGTEATAYNTTVVCTFERFPAETFCTLTATSVARQLQQFPSESLPANVYGIVFYTPDQDGGVSKDAIIVSGYANTYELASYDRELQGLRDIPSYGIFPAGTAYTGSDGISFLGLATVSVVVDDYIFRYNVSECSITGAAFISGTLVLDNSGECGLGMAVSSETAFPILGAQFRPYKSGKFTLQLNWDTIGTTGEVYEQAIVFSVVERAPPVITSVEKQSIYQSLPCGTETLNVTGFNFRLSDKRELLASNEDGTLSVWQGKPDSFLYDQLTDSSSFVLESVGGVGRNVPFTIRALYGSDFVDAVYLQDDASSLFSLDFSTPPELLGITPNVSEPEGGSRIVLVGTFDGFKATSVIRIGGFEIRGSDVQISSSSELAFTSPPLSALGKQFSYNVLVEVCAERSEPFPLMYNVAPLLTITAADSSTNEETSYVIPYDGEATFVAEVSENNNGASYLWQLLSTDGEEIPLENTTLTEQIFTVTADMISPSGTPFILQATVQNSVGLSDTSQVTIELATPVVEFILVNVFEVEVLTRSLNSTTLVQASLVVETSNYTGVVLEWVYRNRSYVVDENTQFRNSSVAGQSVTGPTKLGLEFNIARQDLVMGVSRLELIATLISNPIISGRDAVNIVVIHSELQAIINDGLNGTLLLSGTDLNLHGGNSFDPDVLPDESNPTTEIQYDWFSCQKSLDASFTNDVEDCSGILPEILNSVNITILASNLFDSRLDDSNDPNPTFFSFGLTVSKDNRTAVTYSYFELRTSSSSEPVPALTTLEVVDSKGIAIDVKSANTLTDIVIQPNSDDATVSWSFDMTRISQQYLLLQGGVLKDGPGYVSVRGQRSRLPLAFAANSLEEGTEYTVQVSVYSTESSIVQQYEISFLTSEIPKLSCTAPIENVGILSETMFTISGQLSFEAQNIEYCFFLSSSPEERFSVGKGCSSVPFASFTFHREGIYQIECEARTTSGALVDRVLLNTTLSIVPPTPTEDQTVLENLSDRVANLTEEAELCEAMRDHGCLISLISVANSIAGIVVSVTDSDASEEAQQLVDQTQSYVANLSRISETLTTTTVYRPNQIATAIDLSFYLLLVPQSLFEDENTLFAALKQAESAIEITEDSTVEALVSDSLVEKVSTIANLSLATAFNIGQEGTSRRRLQRDTGILRRAYGVLLLKTTKLIASIRAQQETCGFSGIESTTLRESEVTRQVPRNRSDSRIPPVQLHVQVSCDENQVSKPLSLSAVQQQLCPGVLQSISSRRMVASFVIIPEESVRATGLLLDIDSRVTHCPILEVRGIVRDEIPPECFRVTMEINKTLGGSSEETRAGIIWNDSSVPLDVCGRDNCFIFRTDDDDIVQVTDTDVTISTKNQGFFIAGIPKERAPGPIED-IRGSDLAENGTLGIVLGIGVAFVLGTVLVTWFAATHVVVVAPSAAAVGEDWEYVERDNFGRGLQEDETDRN--YRAEHYLPKGAKLPS 1587          
The following BLAST results are available for this feature:
BLAST of Gvermi767.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IT18_9FLOR0.000e+064.13IPT/TIG domain-containing protein n=1 Tax=Gracilar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1097..1117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1553..1586
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1504..1524
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1525..1586
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..1503
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availableTMHMMTMhelixcoord: 1502..1524
IPR002859PKD/REJ-like domainPFAMPF02010REJcoord: 692..1015
e-value: 5.3E-11
score: 42.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:18858..23618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi767.t1Gvermi767.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 18858..23618 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi767.t1 ID=Gvermi767.t1|Name=Gvermi767.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1587bp
MGSVDRIILFFLSFSLVHVTRVTAQHHLSNNRPTFESFRQLESTPSVGIS
FESQSDTDFFLVNGESDELIVNFIFMPPSGSSPEEFAISFACESSIVLFN
NSCSITNTISAIIGTDATAFNTTVACTFERFPAITSCSLSATSVARQPLR
FQSEDVPVNVYGIVLYEPDENGQVSESAKILSGYGNSFELETYDREDQGI
RELQSYGVLPDNIPYEGSNGISFLNLASVSVIADDQLFWYNISSCSITGS
YYDASGPVFENPTQCGLGFAVRNEDVYPTFGAHLRPFKSGKFTLQLNWDS
LGPNGEAYEQAVVFSVVERAPPVVVGISKQESYQSLPCGIETLNITGFNF
RFSDKRQLLTSNSDGSVSVWPEVQESFSYNEREDLSFLSFESSGGVGKNV
PFSVVVFYGSESVTAISLQNDIILATNFSTPPELIGLAPNIAEPDGGTKI
VLNGTFDGFKNSSFLRVGGFSIRGIDVEIIDGASIAFLAPPLSALGRQYN
YDVFVEVCAERSDSLSLTYNVPPAVSITAADSSTNDDGVFVIPFDGEATF
VAEVSANNINVTYNWGLLSIDGDAVSLHNSTLTGQVFTVSSDVINPSGVL
FVLQVNVTNSIELYDSSNITIVRANPVDEYILVNLFEIETLKRSVNATTL
IQASLVVEANNISEVVLEWVYRGERYVVDESMGFRNASQKAQDITGPTKL
GLEFNIARKDLQIGVSRIELIATLRNNKEISGRDSIDVVVIQSKLEAVIN
DGLNGTLILSGNDLHLNGGNSFDPDILPDESNPTIEIQYDWIGCQSSLDS
SFLTDVSDCSSILPEILNSVNITIAAADLIDSRLDTETVPIPTFFLFGLR
VSKDNRTSETYAYFELQTLESPEAVPVLTSLDVVDGKGIPIDLKKANLFS
DIIIQPESDDISVFWSFDMANVGQQYLLLQPDVVKQGRGFVSTRGEKSRL
PLAFAANSLEETTEYVVEVSVFSSRSSLVQTYEISFVTSETPKLLCTGPI
EDSGTTSETVFTISGQLTFEAQEIEYCFSLISSRMEKFFVGKGCSSVPFA
TFSVHKDGVYQIECEAKTVSGTSVDKVTLNRTLSVKSPTPPEDQTVLENL
AERIANLTEEVAFCEAVRDHGCLTALISAASEVAQTVVSVTDSDSSEEAQ
SLIDFTQSYVANLSRISEGLTKTTVYQPNQILAAIDLTFYLLLVPQSLFE
DESTLFAALRQAETAIGITEDSTIEALVSDLLVEKVSTIANISLSVAFNI
GHEGSSRRRLLQEPGLTRRAYGILLVKTTRFIASVRAQQETCGFSGTEST
AVRESVIGRQIPTTSSNIQIQSVELHVQVSCNSNQVGGIIELTDIQRKLC
SDMIPILSSRRVEVSIIAIPKESLAATGLLLDVDNRASRCPIIDVRGVDG
DEIPPQCIQVTLKIETKSGDSLTEIRAGIIRNESSVPIDFCDIDDCFLFQ
TDDQDVVSVTESTVSVMTKNQGLFVAGIPHERIAGPIDDDIRGDGLAGVG
STGVAIGIGVAFVVGTILVMWFAATHFVVIAPATAIEDDWEYVERDAYGR
GMEDEYKDPNPSFRAEHFLPKDANLPSGKRGAKTVK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002859PKD/REJ-like