Gvermi7669.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7669.t1
Unique NameGvermi7669.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length168
Homology
BLAST of Gvermi7669.t1 vs. uniprot
Match: R7QCC2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCC2_CHOCR)

HSP 1 Score: 128 bits (321), Expect = 3.450e-31
Identity = 60/166 (36.14%), Postives = 102/166 (61.45%), Query Frame = 0
Query:    1 LARDNLALAVTRQKHYADRHRSELHLEQDDLVLLRADRLTTARGAIIQRKWQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFYG-ELSGPLDIVINNDGVVEQEVERVLDKRRANRLVYYLTQFCGDRDSDAIWLPRAALRSRCAKVTEFNLQQK 165
            +ARDN+A A   +KHYAD+ R ++  E  DL                       ++GP  VL+  GPVTYR+ELPP+++RAH+V+H+ KL+++   E    ++++I+ DG V++EV+ ++DK++ +  ++YL +F GD +S+AIW+P+  LR+    V E+   +K
Sbjct:  758 IARDNIAHARADEKHYADKKRRDVQFEVGDL-----------------------YLGPLSVLEVKGPVTYRIELPPSLKRAHNVFHVSKLKKYQQQEGQNNMEVIIDGDGTVQEEVQEIMDKKKEDNAIWYLVRFYGDEESEAIWMPKQDLRNYMDLVNEYERARK 900          
BLAST of Gvermi7669.t1 vs. uniprot
Match: A0A2V3IRL6_9FLOR (Chromo domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRL6_9FLOR)

HSP 1 Score: 104 bits (259), Expect = 2.420e-25
Identity = 48/123 (39.02%), Postives = 81/123 (65.85%), Query Frame = 0
Query:   30 DLVLLRADRLTTARGAIIQRKWQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFY-GELSGPLDIVINNDGVVEQEVERVLDKRRANRLVYYLTQFCGDRDSDAIWLPRAALR 151
            DLVLL+   L+  R   + +KW+P F+GP R+L+K+GPV YRLELPP M++AH+V+++ ++RR+   + +  +++V++  G +EQEV+ +L  R       +L QF G+  + A+W  R  L+
Sbjct:    7 DLVLLQVAGLSIERRTDLPQKWRPKFVGPLRILEKIGPVAYRLELPPDMKKAHNVFNVDRIRRYTPDDTTAYVNVVVDAKGGIEQEVKAILRHRGPKTRRQFLVQFVGETPNAALWHTRTDLK 129          
BLAST of Gvermi7669.t1 vs. uniprot
Match: UPI00098E4BA8 (uncharacterized protein LOC109841823 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E4BA8)

HSP 1 Score: 96.3 bits (238), Expect = 5.250e-21
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 0
Query:    1 LARDNLALAVTRQKHYADRHRSELHLEQDDLVLLRADRLTTARGAIIQRKWQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFYGELSGPLDIV------INNDGVVEQEVERVLDKRRA---NRLVYYL-TQFCGDRDSDAIWLPRAALRSR 153
            L R+ L  A +RQK Y D+ R EL  +  D V L+       +   IQ K  P FIGPF +L+++GPV YRL LPP +   HDV+HI  LR+F   +  P +IV      +  D   E+  ER++D +     +R++ Y+  Q+    + +A W    ++R R
Sbjct:  120 LVRERLRTAQSRQKSYVDQRRRELEFQVGDHVFLKVSPTRGVKRFGIQGKLSPRFIGPFEILERIGPVAYRLALPPALSGVHDVFHISMLRKF---IRDPNEIVELSPVELKPDLTYEERPERIVDFKEQVLRHRIIKYVKVQWNNHSEREATWETEDSMRER 279          
BLAST of Gvermi7669.t1 vs. uniprot
Match: A0A6P6VEQ7_COFAR (uncharacterized protein LOC113722083 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6VEQ7_COFAR)

HSP 1 Score: 92.8 bits (229), Expect = 2.810e-20
Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 0
Query:    1 LARDNLALAVTRQKHYADRHRSELHLEQDDLVLLRADRL---TTARGAIIQRKWQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFYGE---LSGPLDIVINNDGVVEQEVERVLDKR 122
            L R  L  A +RQK YAD  R +L  E  D V L+   L   T  RG    +K QP FIGPF +L+++G V YRLELPP++ R HDV+H+  L+++Y +   +  P +I I+     E++  +VLD++
Sbjct:   10 LIRQRLQTAQSRQKSYADNRRKDLEFEVGDHVFLKITPLRSITAGRG----KKLQPRFIGPFPILQRVGKVAYRLELPPSLSRIHDVFHVSMLKKYYPDPTHIVQPEEIEIDEALTYEEKPVQVLDRK 133          
BLAST of Gvermi7669.t1 vs. uniprot
Match: UPI0010A47AA5 (uncharacterized protein LOC114760773 n=3 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A47AA5)

HSP 1 Score: 91.3 bits (225), Expect = 2.920e-20
Identity = 50/151 (33.11%), Postives = 83/151 (54.97%), Query Frame = 0
Query:    8 LAVTRQKHYADRHRSELHLEQDDLVLLRADRLTTARGAIIQRKWQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFYGELSG---PLDIVINNDGVVEQEVERVLD---KRRANRLVYYLTQFC-GDRDSDAIWLPRAALR 151
            +A +RQK YADR R  L  E  D V L+   +T    +I  +K  P F+GP+ +L+++GPV YR+ LPP +   HDV+H+ +L++++ + S    P ++ + ++     E ER+LD   K+  N+ +  +  F  G    DA W     +R
Sbjct:    1 MAQSRQKSYADRRRRPLEFEVGDHVFLKVSPVTGVGRSIKAKKLTPRFMGPYEILERIGPVAYRIALPPHLSSLHDVFHVSQLKKYHPDPSHVIEPEEVELRDNLTYPAEPERILDVKDKQLRNKTIRLVKVFWKGMSPGDATWETEERMR 151          
BLAST of Gvermi7669.t1 vs. uniprot
Match: A0A6P6W3A2_COFAR (uncharacterized protein LOC113729289 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6W3A2_COFAR)

HSP 1 Score: 92.4 bits (228), Expect = 3.780e-20
Identity = 50/128 (39.06%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    1 LARDNLALAVTRQKHYADRHRSELHLEQDDLVLLRADRL---TTARGAIIQRKWQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFYGELSG---PLDIVINNDGVVEQEVERVLDKR 122
            L R  L  A +RQK YAD  R +L  E +D V ++   L   TT R    ++K QP FIGPF++L+++G V YRLELP ++ R HDV+H+  L+++Y +L+    P +I I+     E++  ++LD++
Sbjct:   44 LIRQKLQTAQSRQKSYADNRRKDLEYEVEDRVFIKITPLRSVTTGR----EKKLQPKFIGPFKILQRVGKVAYRLELPSSLSRIHDVFHVSILKKYYSDLTHILQPEEIEIDEALTYEEKPVQLLDRK 167          
BLAST of Gvermi7669.t1 vs. uniprot
Match: A0A6V7QBH3_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7QBH3_ANACO)

HSP 1 Score: 92.0 bits (227), Expect = 4.090e-20
Identity = 51/158 (32.28%), Postives = 87/158 (55.06%), Query Frame = 0
Query:    1 LARDNLALAVTRQKHYADRHRSELHLEQDDLVLLRADRLTTARGAIIQRKWQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFYGELS---GPLDIVINNDGVVEQEVERVLD---KRRANRLVYYL-TQFCGDRDSDAIWLPRAALR 151
            +AR+ L  A +RQK YAD+ R +L  +  + VLL+       +   ++ K  P F+GPF +L+++G V YRL LPP++ R H+V+H+  LR++  + S    P  I +  D   E+   R+L    K+  NR + Y+  Q+    + +A W   +++R
Sbjct:   34 IARERLQTAQSRQKSYADQRRRDLEFQVGEHVLLKVSPSRGIKRFGLRNKLSPRFVGPFEILERVGTVAYRLALPPSLARVHNVFHVSMLRKYIPDPSHVISPTSIQLREDLSYEEAPMRILAREVKQLRNRSIPYVKVQWANHEEREATWELESSMR 191          
BLAST of Gvermi7669.t1 vs. uniprot
Match: UPI00080A199D (uncharacterized protein LOC108332603 n=2 Tax=Phaseolus angularis TaxID=3914 RepID=UPI00080A199D)

HSP 1 Score: 92.0 bits (227), Expect = 4.670e-20
Identity = 53/160 (33.12%), Postives = 84/160 (52.50%), Query Frame = 0
Query:    1 LARDNLALAVTRQKHYADRHRSELHLEQDDLVLLRADRLTTARGAIIQRKWQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFYGELSGPL---DIVINNDGVVEQEVERVLD------KRRANRLVYYLTQFCGDRDSDAIWLPRAALR 151
            L ++ L  + +RQK YAD+ R  L     D V LR    T    A+  +K  P F+GP+++L+K+GPV Y L LPP +   H V+H+ +LR++  + S  L   D+ +  D  +E +  RV D      KR+A RLV  +     ++  D+ W    A++
Sbjct:   41 LIQERLKTSRSRQKSYADKRRRSLEFNARDHVFLRPYPTTGVGRAVRPKKLSPKFVGPYQILRKIGPVAYELSLPPQLSNLHPVFHVSQLRKYIADPSHVLELEDVRLRQDRTLEMQPVRVEDSRTKYYKRKAIRLVKVIWD---EKTGDSTWEVETAMK 197          
BLAST of Gvermi7669.t1 vs. uniprot
Match: UPI00080A4664 (uncharacterized protein LOC108319748 n=1 Tax=Phaseolus angularis TaxID=3914 RepID=UPI00080A4664)

HSP 1 Score: 94.0 bits (232), Expect = 7.230e-20
Identity = 54/153 (35.29%), Postives = 82/153 (53.59%), Query Frame = 0
Query:    1 LARDNLALAVTRQKHYADRHRSELHLEQDDLVLLRADRLTTARGAIIQRKWQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFYGELSGPL---DIVINNDGVVEQEVERVLD------KRRANRLVYYLTQFCGDRDSDAIW 144
            L ++ L  + +RQK YAD+ R  L  +  D V LR    T    AI  +K  P F+GP+++L+K+GPV Y L LPP     H V+H+ +LR++  + S  L   DI +  D  +E +  R+ D      KR+A R+V  +     ++ SDA W
Sbjct:  164 LIQERLKTSRSRQKSYADKRRRSLEFDAGDHVFLRLHPTTGVGRAIRPKKLSPKFVGPYQILRKIGPVAYELSLPPQQSNLHPVFHVSQLRKYVSDPSHVLELEDIRLRQDRTLEMQPVRIEDSDTKYYKRKAIRMVKIVWD---EKTSDATW 313          
BLAST of Gvermi7669.t1 vs. uniprot
Match: UPI001929D29C (uncharacterized protein LOC120270315 n=2 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929D29C)

HSP 1 Score: 90.9 bits (224), Expect = 1.470e-19
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 0
Query:    1 LARDNLALAVTRQKHYADRHRSELHLEQDDLVLLRADRLTTARGAI---IQRKWQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFYGELSGPL---DIVINNDGVVEQEVERVLDKR----RANRLVYYLTQFCGDRDSDAIWLPRAALRSR 153
            L RD L  A +RQK YAD  R  L  +  D V LR   +   +G I   ++ K  P FIGPF +L+++G V YRL LPP++ R HDV+H+  L++F       +   D  ++ND   E+   +++D +    R   + Y   Q+    + +A W   + ++ R
Sbjct:   41 LIRDRLRAAQSRQKSYADNRRRSLEFQVGDHVFLR---VAPTKGVIRFGVRGKLSPRFIGPFEILERIGEVAYRLALPPSLSRVHDVFHVSMLKKFIPNPDHVIQFSDFELSNDLTYEERPIKIVDFKEQTLRRRVISYIKVQWSNHSEREATWELESEIKER 200          
The following BLAST results are available for this feature:
BLAST of Gvermi7669.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QCC2_CHOCR3.450e-3136.14Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IRL6_9FLOR2.420e-2539.02Chromo domain-containing protein n=2 Tax=Gracilari... [more]
UPI00098E4BA85.250e-2134.97uncharacterized protein LOC109841823 n=1 Tax=Aspar... [more]
A0A6P6VEQ7_COFAR2.810e-2040.63uncharacterized protein LOC113722083 n=1 Tax=Coffe... [more]
UPI0010A47AA52.920e-2033.11uncharacterized protein LOC114760773 n=3 Tax=Proso... [more]
A0A6P6W3A2_COFAR3.780e-2039.06uncharacterized protein LOC113729289 n=1 Tax=Coffe... [more]
A0A6V7QBH3_ANACO4.090e-2032.28Uncharacterized protein n=1 Tax=Ananas comosus var... [more]
UPI00080A199D4.670e-2033.13uncharacterized protein LOC108332603 n=2 Tax=Phase... [more]
UPI00080A46647.230e-2035.29uncharacterized protein LOC108319748 n=1 Tax=Phase... [more]
UPI001929D29C1.470e-1932.52uncharacterized protein LOC120270315 n=2 Tax=Diosc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.40coord: 102..167
e-value: 1.1E-5
score: 27.3
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 80..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:1695288..1695791 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7669.t1Gvermi7669.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 1695288..1695791 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7669.t1 ID=Gvermi7669.t1|Name=Gvermi7669.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=168bp
LARDNLALAVTRQKHYADRHRSELHLEQDDLVLLRADRLTTARGAIIQRK
WQPCFIGPFRVLKKLGPVTYRLELPPTMRRAHDVYHILKLRRFYGELSGP
LDIVINNDGVVEQEVERVLDKRRANRLVYYLTQFCGDRDSDAIWLPRAAL
RSRCAKVTEFNLQQKPH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016197Chromo-like_dom_sf